RNA–Protein interactions for RNA: ENST00000312492.2

HOXC5-201, Transcript of homeobox C5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC5, Length 1,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5-201ENST00000312492 SEC61BP60468 96 aaKnown RBP8.75□□□□□ -1.01
HOXC5-201ENST00000312492 LCA10Q71F78 164 aa8.72□□□□□ -1.01
HOXC5-201ENST00000312492 LINC01558Q9Y6Z2 57 aa8.7□□□□□ -1.02
HOXC5-201ENST00000312492 PSPHP1O15172 72 aa8.69□□□□□ -1.02
HOXC5-201ENST00000312492 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
HOXC5-201ENST00000312492 PRR15LQ9BU68 103 aa8.66□□□□□ -1.02
HOXC5-201ENST00000312492 Q5VV11 94 aa8.59□□□□□ -1.03
HOXC5-201ENST00000312492 A6NN06 94 aa8.57□□□□□ -1.04
HOXC5-201ENST00000312492 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
HOXC5-201ENST00000312492 A0A1B0GU69 56 aa8.55□□□□□ -1.04
HOXC5-201ENST00000312492 S4R3F8 94 aa8.54□□□□□ -1.04
HOXC5-201ENST00000312492 MUC17Q685J3 4493 aa8.52□□□□□ -1.05
HOXC5-201ENST00000312492 KRTAP4-1Q9BYQ7 146 aa8.52□□□□□ -1.05
HOXC5-201ENST00000312492 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
HOXC5-201ENST00000312492 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
HOXC5-201ENST00000312492 UBR4Q5T4S7 5183 aa8.47□□□□□ -1.05
HOXC5-201ENST00000312492 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
HOXC5-201ENST00000312492 A6NED7 52 aa8.43□□□□□ -1.06
HOXC5-201ENST00000312492 A0A0A0MQY5 61 aa8.38□□□□□ -1.07
HOXC5-201ENST00000312492 CSAG1Q6PB30 78 aa8.33□□□□□ -1.08
HOXC5-201ENST00000312492 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
HOXC5-201ENST00000312492 UQCR11O14957 56 aa8.31□□□□□ -1.08
HOXC5-201ENST00000312492 A8MU10 97 aa8.29□□□□□ -1.08
HOXC5-201ENST00000312492 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
HOXC5-201ENST00000312492 A0A1B0GU33 70 aa8.24□□□□□ -1.09
HOXC5-201ENST00000312492 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
HOXC5-201ENST00000312492 SPATA8Q6RVD6 105 aa8.2□□□□□ -1.1
HOXC5-201ENST00000312492 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
HOXC5-201ENST00000312492 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
HOXC5-201ENST00000312492 MUC2Q02817 5179 aa8.18□□□□□ -1.1
HOXC5-201ENST00000312492 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
HOXC5-201ENST00000312492 H0YAA0 97 aa8.13□□□□□ -1.11
HOXC5-201ENST00000312492 P0C880 135 aa8.13□□□□□ -1.11
HOXC5-201ENST00000312492 RNF213Q63HN8 5207 aa8.11□□□□□ -1.11
HOXC5-201ENST00000312492 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
HOXC5-201ENST00000312492 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
HOXC5-201ENST00000312492 FLGP20930 4061 aaPredicted RBP8.01□□□□□ -1.13
HOXC5-201ENST00000312492 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
HOXC5-201ENST00000312492 M0QZ58 72 aa7.94□□□□□ -1.14
HOXC5-201ENST00000312492 MT1HP80294 61 aa7.91□□□□□ -1.14
HOXC5-201ENST00000312492 A0A0D9SG42 100 aa7.9□□□□□ -1.14
HOXC5-201ENST00000312492 M0R2T5 61 aa7.89□□□□□ -1.15
HOXC5-201ENST00000312492 R4GN34 69 aa7.89□□□□□ -1.15
HOXC5-201ENST00000312492 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
HOXC5-201ENST00000312492 K7ERS5 55 aa7.85□□□□□ -1.15
HOXC5-201ENST00000312492 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
HOXC5-201ENST00000312492 ROMO1P60602 79 aa7.82□□□□□ -1.16
HOXC5-201ENST00000312492 CRIPTQ9P021 101 aa7.75□□□□□ -1.17
HOXC5-201ENST00000312492 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.17
HOXC5-201ENST00000312492 KRTAP12-1P59990 96 aa7.71□□□□□ -1.18
HOXC5-201ENST00000312492 KRTAP12-2P59991 146 aa7.71□□□□□ -1.18
HOXC5-201ENST00000312492 MT2AP02795 61 aa7.63□□□□□ -1.19
HOXC5-201ENST00000312492 KRTAP9-8Q9BYQ0 159 aa7.62□□□□□ -1.19
HOXC5-201ENST00000312492 KRTAP9-2Q9BYQ4 174 aa7.62□□□□□ -1.19
HOXC5-201ENST00000312492 MT1FP04733 61 aa7.59□□□□□ -1.19
HOXC5-201ENST00000312492 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
HOXC5-201ENST00000312492 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
HOXC5-201ENST00000312492 KRTAP25-1Q3LHN0 102 aa7.54□□□□□ -1.2
HOXC5-201ENST00000312492 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
HOXC5-201ENST00000312492 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
HOXC5-201ENST00000312492 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
HOXC5-201ENST00000312492 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
HOXC5-201ENST00000312492 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
HOXC5-201ENST00000312492 PLAC4Q8WY50 150 aa7.36□□□□□ -1.23
HOXC5-201ENST00000312492 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.24
HOXC5-201ENST00000312492 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
HOXC5-201ENST00000312492 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
HOXC5-201ENST00000312492 NDUFAF8A1L188 74 aa7.27□□□□□ -1.25
HOXC5-201ENST00000312492 MT1BP07438 61 aa7.2□□□□□ -1.26
HOXC5-201ENST00000312492 KRTAP15-1Q3LI76 137 aa7.13□□□□□ -1.27
HOXC5-201ENST00000312492 FSIP2Q5CZC0 6907 aa7.12□□□□□ -1.27
HOXC5-201ENST00000312492 LCE2BO14633 110 aa7.11□□□□□ -1.27
HOXC5-201ENST00000312492 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
HOXC5-201ENST00000312492 TNP1P09430 55 aa7.06□□□□□ -1.28
HOXC5-201ENST00000312492 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
HOXC5-201ENST00000312492 MT1XP80297 61 aa7.01□□□□□ -1.29
HOXC5-201ENST00000312492 KRTAP10-5P60370 271 aa7□□□□□ -1.29
HOXC5-201ENST00000312492 PRO2289Q9P1D8 64 aa6.95□□□□□ -1.3
HOXC5-201ENST00000312492 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
HOXC5-201ENST00000312492 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
HOXC5-201ENST00000312492 USH2AO75445 5202 aa6.83□□□□□ -1.32
HOXC5-201ENST00000312492 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
HOXC5-201ENST00000312492 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
HOXC5-201ENST00000312492 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
HOXC5-201ENST00000312492 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
HOXC5-201ENST00000312492 KRTAP19-6Q3LI70 58 aa6.65□□□□□ -1.34
HOXC5-201ENST00000312492 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
HOXC5-201ENST00000312492 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
HOXC5-201ENST00000312492 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
HOXC5-201ENST00000312492 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
HOXC5-201ENST00000312492 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
HOXC5-201ENST00000312492 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
HOXC5-201ENST00000312492 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
HOXC5-201ENST00000312492 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
HOXC5-201ENST00000312492 KMT2DO14686 5537 aa6.33□□□□□ -1.4
HOXC5-201ENST00000312492 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
HOXC5-201ENST00000312492 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
HOXC5-201ENST00000312492 KRTAP19-7Q3SYF9 63 aa6.25□□□□□ -1.41
HOXC5-201ENST00000312492 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
HOXC5-201ENST00000312492 MT1EP04732 61 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms