RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 SERP2Q8N6R1 65 aa10.34□□□□□ -0.75
SNUPN-201ENST00000308588 FSIP2Q5CZC0 6907 aa10.32□□□□□ -0.76
SNUPN-201ENST00000308588 DMAC1Q96GE9 116 aa10.29□□□□□ -0.76
SNUPN-201ENST00000308588 SNURFQ9Y675 71 aa10.29□□□□□ -0.76
SNUPN-201ENST00000308588 NDUFC1O43677 76 aa10.26□□□□□ -0.77
SNUPN-201ENST00000308588 C20orf197Q8N268 126 aa10.25□□□□□ -0.77
SNUPN-201ENST00000308588 LCE2BO14633 110 aa10.24□□□□□ -0.77
SNUPN-201ENST00000308588 ANAPC13Q9BS18 74 aa10.23□□□□□ -0.77
SNUPN-201ENST00000308588 KRTAP9-6A0A140TA67 174 aa10.21□□□□□ -0.78
SNUPN-201ENST00000308588 CRCT1Q9UGL9 99 aa10.21□□□□□ -0.78
SNUPN-201ENST00000308588 USH2AO75445 5202 aa10.19□□□□□ -0.78
SNUPN-201ENST00000308588 COX7CP15954 63 aa10.14□□□□□ -0.79
SNUPN-201ENST00000308588 ACYP2P14621 99 aa10.11□□□□□ -0.79
SNUPN-201ENST00000308588 SPANXA2-OT1Q8N9U9 137 aa10.08□□□□□ -0.8
SNUPN-201ENST00000308588 H0YAA0 97 aa10.07□□□□□ -0.8
SNUPN-201ENST00000308588 KRTAP19-1Q8IUB9 90 aa10.04□□□□□ -0.8
SNUPN-201ENST00000308588 SSPOA2VEC9 5147 aa10.01□□□□□ -0.81
SNUPN-201ENST00000308588 CCDC179H3BU77 68 aa10□□□□□ -0.81
SNUPN-201ENST00000308588 ADM2Q7Z4H4 148 aa9.98□□□□□ -0.81
SNUPN-201ENST00000308588 SPRR2GQ9BYE4 73 aa9.97□□□□□ -0.81
SNUPN-201ENST00000308588 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
SNUPN-201ENST00000308588 CRIPTQ9P021 101 aa9.92□□□□□ -0.82
SNUPN-201ENST00000308588 H7BZZ5 65 aa9.92□□□□□ -0.82
SNUPN-201ENST00000308588 CHKB-CPT1BH3BT56 60 aa9.91□□□□□ -0.82
SNUPN-201ENST00000308588 SPTSSBQ8NFR3 76 aa9.87□□□□□ -0.83
SNUPN-201ENST00000308588 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
SNUPN-201ENST00000308588 P0C880 135 aa9.83□□□□□ -0.84
SNUPN-201ENST00000308588 KRTAP19-8Q3LI54 63 aa9.83□□□□□ -0.84
SNUPN-201ENST00000308588 KRTAP19-6Q3LI70 58 aa9.8□□□□□ -0.84
SNUPN-201ENST00000308588 MT1BP07438 61 aa9.79□□□□□ -0.84
SNUPN-201ENST00000308588 COA5Q86WW8 74 aa9.77□□□□□ -0.84
SNUPN-201ENST00000308588 Q5VV11 94 aa9.77□□□□□ -0.85
SNUPN-201ENST00000308588 FCGBPQ9Y6R7 5405 aaPredicted RBP9.73□□□□□ -0.85
SNUPN-201ENST00000308588 TMEM258P61165 79 aa9.67□□□□□ -0.86
SNUPN-201ENST00000308588 R4GN34 69 aa9.67□□□□□ -0.86
SNUPN-201ENST00000308588 M0QZ58 72 aa9.62□□□□□ -0.87
SNUPN-201ENST00000308588 ATP5EP56381 51 aaPredicted RBP9.54□□□□□ -0.88
SNUPN-201ENST00000308588 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.49□□□□□ -0.89
SNUPN-201ENST00000308588 A6NN06 94 aa9.48□□□□□ -0.89
SNUPN-201ENST00000308588 KRTAP10-5P60370 271 aa9.46□□□□□ -0.89
SNUPN-201ENST00000308588 LINC01554Q52M75 96 aa9.46□□□□□ -0.9
SNUPN-201ENST00000308588 PLAC4Q8WY50 150 aa9.41□□□□□ -0.9
SNUPN-201ENST00000308588 SEC61GP60059 68 aa9.41□□□□□ -0.9
SNUPN-201ENST00000308588 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
SNUPN-201ENST00000308588 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
SNUPN-201ENST00000308588 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
SNUPN-201ENST00000308588 MACF1Q9UPN3 7388 aaKnown RBP9.35□□□□□ -0.91
SNUPN-201ENST00000308588 MT1XP80297 61 aa9.29□□□□□ -0.92
SNUPN-201ENST00000308588 A0A1B0GU69 56 aa9.26□□□□□ -0.93
SNUPN-201ENST00000308588 A0A1B0GU33 70 aa9.24□□□□□ -0.93
SNUPN-201ENST00000308588 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
SNUPN-201ENST00000308588 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
SNUPN-201ENST00000308588 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
SNUPN-201ENST00000308588 SYNE2Q8WXH0 6885 aaKnown RBP9.17□□□□□ -0.94
SNUPN-201ENST00000308588 LINC01558Q9Y6Z2 57 aa9.14□□□□□ -0.95
SNUPN-201ENST00000308588 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
SNUPN-201ENST00000308588 A0A0D9SG42 100 aa9.09□□□□□ -0.95
SNUPN-201ENST00000308588 PRR15LQ9BU68 103 aa9.07□□□□□ -0.96
SNUPN-201ENST00000308588 KRTAP6-3Q3LI67 103 aa9.01□□□□□ -0.97
SNUPN-201ENST00000308588 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
SNUPN-201ENST00000308588 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
SNUPN-201ENST00000308588 Q1T7F1 81 aa8.95□□□□□ -0.98
SNUPN-201ENST00000308588 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
SNUPN-201ENST00000308588 A8MU10 97 aa8.93□□□□□ -0.98
SNUPN-201ENST00000308588 SPINT4Q6UDR6 99 aa8.93□□□□□ -0.98
SNUPN-201ENST00000308588 V9GYY9 64 aa8.91□□□□□ -0.98
SNUPN-201ENST00000308588 KMT2DO14686 5537 aa8.89□□□□□ -0.99
SNUPN-201ENST00000308588 KRTAP10-7P60409 375 aaPredicted RBP8.88□□□□□ -0.99
SNUPN-201ENST00000308588 UQCR11O14957 56 aa8.81□□□□□ -1
SNUPN-201ENST00000308588 KRTAP10-12P60413 245 aa8.81□□□□□ -1
SNUPN-201ENST00000308588 KRTAP5-9P26371 169 aa8.79□□□□□ -1
SNUPN-201ENST00000308588 KRTAP4-8A0A0G2JLE6 195 aa8.76□□□□□ -1.01
SNUPN-201ENST00000308588 KRTAP4-8Q9BYQ9 185 aa8.76□□□□□ -1.01
SNUPN-201ENST00000308588 PSPHP1O15172 72 aa8.75□□□□□ -1.01
SNUPN-201ENST00000308588 KRTAP8-1Q8IUC2 63 aa8.71□□□□□ -1.01
SNUPN-201ENST00000308588 MUC12Q9UKN1 5478 aa8.7□□□□□ -1.02
SNUPN-201ENST00000308588 MIR22HGQ0VDD5 57 aa8.65□□□□□ -1.02
SNUPN-201ENST00000308588 SPRR2FQ96RM1 72 aa8.61□□□□□ -1.03
SNUPN-201ENST00000308588 NEBP20929 6669 aa8.55□□□□□ -1.04
SNUPN-201ENST00000308588 C10orf95Q9H7T3 257 aa8.53□□□□□ -1.04
SNUPN-201ENST00000308588 MDN1Q9NU22 5596 aa8.51□□□□□ -1.05
SNUPN-201ENST00000308588 A6NED7 52 aa8.46□□□□□ -1.05
SNUPN-201ENST00000308588 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
SNUPN-201ENST00000308588 TNP1P09430 55 aa8.38□□□□□ -1.07
SNUPN-201ENST00000308588 SPRR2EP22531 72 aa8.38□□□□□ -1.07
SNUPN-201ENST00000308588 SPRR2BP35325 72 aa8.38□□□□□ -1.07
SNUPN-201ENST00000308588 SPRR2AP35326 72 aa8.38□□□□□ -1.07
SNUPN-201ENST00000308588 K7ERS5 55 aa8.37□□□□□ -1.07
SNUPN-201ENST00000308588 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
SNUPN-201ENST00000308588 LCE1AQ5T7P2 110 aa8.36□□□□□ -1.07
SNUPN-201ENST00000308588 KRTAP19-7Q3SYF9 63 aa8.3□□□□□ -1.08
SNUPN-201ENST00000308588 PRO0628Q9UI54 55 aa8.3□□□□□ -1.08
SNUPN-201ENST00000308588 LCE3AQ5TA76 89 aa8.22□□□□□ -1.09
SNUPN-201ENST00000308588 MT1EP04732 61 aa8.19□□□□□ -1.1
SNUPN-201ENST00000308588 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
SNUPN-201ENST00000308588 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
SNUPN-201ENST00000308588 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
SNUPN-201ENST00000308588 SPRR2DP22532 72 aa8.08□□□□□ -1.12
SNUPN-201ENST00000308588 KRTAP2-3P0C7H8 128 aa8.03□□□□□ -1.12
SNUPN-201ENST00000308588 KRTAP2-4Q9BYR9 128 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms