RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
CLCC1-201ENST00000302500 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
CLCC1-201ENST00000302500 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
CLCC1-201ENST00000302500 ATP5EP2Q5VTU8 51 aa5.11□□□□□ -1.59
CLCC1-201ENST00000302500 TRAV22A0A0B4J277 110 aa5.1□□□□□ -1.59
CLCC1-201ENST00000302500 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
CLCC1-201ENST00000302500 S4R3F8 94 aa5.1□□□□□ -1.59
CLCC1-201ENST00000302500 A0A1B0GV90 55 aa5.07□□□□□ -1.6
CLCC1-201ENST00000302500 LOC101927531A0A1B0GV80 90 aa5.06□□□□□ -1.6
CLCC1-201ENST00000302500 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
CLCC1-201ENST00000302500 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
CLCC1-201ENST00000302500 UQCRQO14949 82 aa5.03□□□□□ -1.6
CLCC1-201ENST00000302500 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
CLCC1-201ENST00000302500 HIST1H4AP62805 103 aaKnown RBP5□□□□□ -1.61
CLCC1-201ENST00000302500 KLKP1Q107X0 134 aa5□□□□□ -1.61
CLCC1-201ENST00000302500 H0Y9P7 68 aa4.99□□□□□ -1.61
CLCC1-201ENST00000302500 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
CLCC1-201ENST00000302500 ATOX1O00244 68 aa4.97□□□□□ -1.61
CLCC1-201ENST00000302500 H0YAA0 97 aa4.97□□□□□ -1.61
CLCC1-201ENST00000302500 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
CLCC1-201ENST00000302500 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
CLCC1-201ENST00000302500 FAM236AA0A1B0GUQ0 79 aa4.94□□□□□ -1.62
CLCC1-201ENST00000302500 FAM236BA0A1B0GV22 79 aa4.94□□□□□ -1.62
CLCC1-201ENST00000302500 Q5VV11 94 aa4.94□□□□□ -1.62
CLCC1-201ENST00000302500 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
CLCC1-201ENST00000302500 A8MUN3 132 aa4.92□□□□□ -1.62
CLCC1-201ENST00000302500 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CLCC1-201ENST00000302500 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
CLCC1-201ENST00000302500 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
CLCC1-201ENST00000302500 MUC12Q9UKN1 5478 aa4.9□□□□□ -1.63
CLCC1-201ENST00000302500 NEBP20929 6669 aa4.88□□□□□ -1.63
CLCC1-201ENST00000302500 A6NN06 94 aa4.87□□□□□ -1.63
CLCC1-201ENST00000302500 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
CLCC1-201ENST00000302500 IMUPQ9GZP8 106 aa4.87□□□□□ -1.63
CLCC1-201ENST00000302500 NDUFC1O43677 76 aa4.85□□□□□ -1.63
CLCC1-201ENST00000302500 H3BPC8 53 aa4.84□□□□□ -1.63
CLCC1-201ENST00000302500 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
CLCC1-201ENST00000302500 MP68P56378 58 aa4.82□□□□□ -1.64
CLCC1-201ENST00000302500 KMT2DO14686 5537 aa4.81□□□□□ -1.64
CLCC1-201ENST00000302500 J3QR89 54 aa4.81□□□□□ -1.64
CLCC1-201ENST00000302500 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
CLCC1-201ENST00000302500 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
CLCC1-201ENST00000302500 MT-ATP8P03928 68 aa4.79□□□□□ -1.64
CLCC1-201ENST00000302500 P0C880 135 aa4.79□□□□□ -1.64
CLCC1-201ENST00000302500 MT1XP80297 61 aa4.79□□□□□ -1.64
CLCC1-201ENST00000302500 KRTAP4-11Q9BYQ6 195 aa4.79□□□□□ -1.64
CLCC1-201ENST00000302500 PCP4P48539 62 aa4.78□□□□□ -1.64
CLCC1-201ENST00000302500 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
CLCC1-201ENST00000302500 TRAV7A0A075B6U4 112 aa4.71□□□□□ -1.66
CLCC1-201ENST00000302500 SCGB1A1P11684 91 aa4.7□□□□□ -1.66
CLCC1-201ENST00000302500 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
CLCC1-201ENST00000302500 K7ERU9 68 aa4.69□□□□□ -1.66
CLCC1-201ENST00000302500 KRTAP12-2P59991 146 aa4.66□□□□□ -1.66
CLCC1-201ENST00000302500 SMIM20Q8N5G0 67 aa4.65□□□□□ -1.67
CLCC1-201ENST00000302500 R4GN34 69 aa4.64□□□□□ -1.67
CLCC1-201ENST00000302500 M0QZ58 72 aa4.62□□□□□ -1.67
CLCC1-201ENST00000302500 ACYP2P14621 99 aa4.61□□□□□ -1.67
CLCC1-201ENST00000302500 C20orf197Q8N268 126 aa4.61□□□□□ -1.67
CLCC1-201ENST00000302500 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
CLCC1-201ENST00000302500 SNURFQ9Y675 71 aa4.59□□□□□ -1.67
CLCC1-201ENST00000302500 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
CLCC1-201ENST00000302500 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
CLCC1-201ENST00000302500 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
CLCC1-201ENST00000302500 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
CLCC1-201ENST00000302500 SERP2Q8N6R1 65 aa4.54□□□□□ -1.68
CLCC1-201ENST00000302500 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
CLCC1-201ENST00000302500 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
CLCC1-201ENST00000302500 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
CLCC1-201ENST00000302500 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
CLCC1-201ENST00000302500 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
CLCC1-201ENST00000302500 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
CLCC1-201ENST00000302500 KRTAP8-1Q8IUC2 63 aa4.49□□□□□ -1.69
CLCC1-201ENST00000302500 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
CLCC1-201ENST00000302500 SPTSSBQ8NFR3 76 aa4.47□□□□□ -1.69
CLCC1-201ENST00000302500 CYSTM1Q9H1C7 97 aa4.47□□□□□ -1.69
CLCC1-201ENST00000302500 SPRR2EP22531 72 aa4.44□□□□□ -1.7
CLCC1-201ENST00000302500 SPRR2BP35325 72 aa4.44□□□□□ -1.7
CLCC1-201ENST00000302500 SPRR2AP35326 72 aa4.44□□□□□ -1.7
CLCC1-201ENST00000302500 CHKB-CPT1BH3BT56 60 aa4.43□□□□□ -1.7
CLCC1-201ENST00000302500 H7BZZ5 65 aa4.42□□□□□ -1.7
CLCC1-201ENST00000302500 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
CLCC1-201ENST00000302500 COX7CP15954 63 aa4.41□□□□□ -1.7
CLCC1-201ENST00000302500 COA5Q86WW8 74 aa4.41□□□□□ -1.7
CLCC1-201ENST00000302500 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
CLCC1-201ENST00000302500 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
CLCC1-201ENST00000302500 SPRR2DP22532 72 aa4.28□□□□□ -1.72
CLCC1-201ENST00000302500 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
CLCC1-201ENST00000302500 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
CLCC1-201ENST00000302500 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
CLCC1-201ENST00000302500 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
CLCC1-201ENST00000302500 MT1EP04732 61 aa4.23□□□□□ -1.73
CLCC1-201ENST00000302500 A0A1B0GU33 70 aa4.22□□□□□ -1.73
CLCC1-201ENST00000302500 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.74
CLCC1-201ENST00000302500 A0A0D9SG42 100 aa4.2□□□□□ -1.74
CLCC1-201ENST00000302500 CCDC179H3BU77 68 aa4.2□□□□□ -1.74
CLCC1-201ENST00000302500 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
CLCC1-201ENST00000302500 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
CLCC1-201ENST00000302500 SEC61GP60059 68 aa4.17□□□□□ -1.74
CLCC1-201ENST00000302500 ANAPC13Q9BS18 74 aa4.17□□□□□ -1.74
CLCC1-201ENST00000302500 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms