RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
COPS2-201ENST00000299259 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
COPS2-201ENST00000299259 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
COPS2-201ENST00000299259 HERC1Q15751 4861 aa5.29□□□□□ -1.56
COPS2-201ENST00000299259 H1FX-AS1Q4G0G2 97 aa5.28□□□□□ -1.56
COPS2-201ENST00000299259 Q5VV11 94 aa5.28□□□□□ -1.56
COPS2-201ENST00000299259 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
COPS2-201ENST00000299259 S4R3F8 94 aa5.28□□□□□ -1.56
COPS2-201ENST00000299259 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
COPS2-201ENST00000299259 LCA10Q71F78 164 aa5.26□□□□□ -1.57
COPS2-201ENST00000299259 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
COPS2-201ENST00000299259 A0A1B0GU69 56 aa5.25□□□□□ -1.57
COPS2-201ENST00000299259 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
COPS2-201ENST00000299259 SEC61GP60059 68 aa5.2□□□□□ -1.58
COPS2-201ENST00000299259 A6NED7 52 aa5.18□□□□□ -1.58
COPS2-201ENST00000299259 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
COPS2-201ENST00000299259 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
COPS2-201ENST00000299259 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
COPS2-201ENST00000299259 CSAG1Q6PB30 78 aa5.13□□□□□ -1.59
COPS2-201ENST00000299259 UQCR11O14957 56 aa5.1□□□□□ -1.59
COPS2-201ENST00000299259 CDC42SE1Q9NRR8 79 aa5.09□□□□□ -1.6
COPS2-201ENST00000299259 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
COPS2-201ENST00000299259 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
COPS2-201ENST00000299259 A8MU10 97 aa5.06□□□□□ -1.6
COPS2-201ENST00000299259 MUC2Q02817 5179 aa5.06□□□□□ -1.6
COPS2-201ENST00000299259 A0A1B0GU33 70 aa5.06□□□□□ -1.6
COPS2-201ENST00000299259 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
COPS2-201ENST00000299259 KRTAP10-6P60371 365 aaPredicted RBP5.05□□□□□ -1.6
COPS2-201ENST00000299259 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
COPS2-201ENST00000299259 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
COPS2-201ENST00000299259 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
COPS2-201ENST00000299259 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
COPS2-201ENST00000299259 H0YAA0 97 aa5.02□□□□□ -1.61
COPS2-201ENST00000299259 P0C880 135 aa5.02□□□□□ -1.61
COPS2-201ENST00000299259 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
COPS2-201ENST00000299259 LCE2CQ5TA81 110 aa5□□□□□ -1.61
COPS2-201ENST00000299259 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
COPS2-201ENST00000299259 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
COPS2-201ENST00000299259 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
COPS2-201ENST00000299259 MT1HP80294 61 aa4.91□□□□□ -1.62
COPS2-201ENST00000299259 M0QZ58 72 aa4.89□□□□□ -1.63
COPS2-201ENST00000299259 M0R2T5 61 aa4.88□□□□□ -1.63
COPS2-201ENST00000299259 PMAIP1Q13794 54 aa4.87□□□□□ -1.63
COPS2-201ENST00000299259 A0A0D9SG42 100 aa4.87□□□□□ -1.63
COPS2-201ENST00000299259 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
COPS2-201ENST00000299259 R4GN34 69 aa4.86□□□□□ -1.63
COPS2-201ENST00000299259 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
COPS2-201ENST00000299259 A6NN06 94 aa4.84□□□□□ -1.63
COPS2-201ENST00000299259 LORP23490 312 aaPredicted RBP4.84□□□□□ -1.63
COPS2-201ENST00000299259 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.64
COPS2-201ENST00000299259 K7ERS5 55 aa4.82□□□□□ -1.64
COPS2-201ENST00000299259 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
COPS2-201ENST00000299259 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
COPS2-201ENST00000299259 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
COPS2-201ENST00000299259 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
COPS2-201ENST00000299259 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
COPS2-201ENST00000299259 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
COPS2-201ENST00000299259 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
COPS2-201ENST00000299259 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
COPS2-201ENST00000299259 MT2AP02795 61 aa4.73□□□□□ -1.65
COPS2-201ENST00000299259 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
COPS2-201ENST00000299259 KRTAP9-8Q9BYQ0 159 aa4.72□□□□□ -1.65
COPS2-201ENST00000299259 MT1FP04733 61 aa4.71□□□□□ -1.66
COPS2-201ENST00000299259 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
COPS2-201ENST00000299259 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
COPS2-201ENST00000299259 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
COPS2-201ENST00000299259 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
COPS2-201ENST00000299259 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
COPS2-201ENST00000299259 ROMO1P60602 79 aa4.62□□□□□ -1.67
COPS2-201ENST00000299259 CAMK2N1Q7Z7J9 78 aa4.57□□□□□ -1.68
COPS2-201ENST00000299259 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
COPS2-201ENST00000299259 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
COPS2-201ENST00000299259 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
COPS2-201ENST00000299259 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
COPS2-201ENST00000299259 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
COPS2-201ENST00000299259 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
COPS2-201ENST00000299259 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
COPS2-201ENST00000299259 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
COPS2-201ENST00000299259 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
COPS2-201ENST00000299259 MT1BP07438 61 aa4.47□□□□□ -1.69
COPS2-201ENST00000299259 KRTAP25-1Q3LHN0 102 aa4.44□□□□□ -1.7
COPS2-201ENST00000299259 TNP1P09430 55 aa4.34□□□□□ -1.71
COPS2-201ENST00000299259 MT1XP80297 61 aa4.34□□□□□ -1.71
COPS2-201ENST00000299259 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
COPS2-201ENST00000299259 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
COPS2-201ENST00000299259 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
COPS2-201ENST00000299259 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
COPS2-201ENST00000299259 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
COPS2-201ENST00000299259 USH2AO75445 5202 aa4.22□□□□□ -1.73
COPS2-201ENST00000299259 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
COPS2-201ENST00000299259 KRTAP10-12P60413 245 aa4.16□□□□□ -1.74
COPS2-201ENST00000299259 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
COPS2-201ENST00000299259 H3BS24 57 aa4.14□□□□□ -1.75
COPS2-201ENST00000299259 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
COPS2-201ENST00000299259 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
COPS2-201ENST00000299259 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
COPS2-201ENST00000299259 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
COPS2-201ENST00000299259 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
COPS2-201ENST00000299259 KRTAP19-5Q3LI72 72 aa3.94□□□□□ -1.78
COPS2-201ENST00000299259 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms