RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 MRPL34Q9BQ48 92 aaKnown RBP6.51□□□□□ -1.37
HMGB2-201ENST00000296503 SPINK7P58062 85 aa6.49□□□□□ -1.37
HMGB2-201ENST00000296503 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
HMGB2-201ENST00000296503 ACYP2P14621 99 aa6.47□□□□□ -1.37
HMGB2-201ENST00000296503 LINC00313P59037 77 aa6.43□□□□□ -1.38
HMGB2-201ENST00000296503 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
HMGB2-201ENST00000296503 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
HMGB2-201ENST00000296503 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.39
HMGB2-201ENST00000296503 IGHV6-1A0A0B4J1U7 121 aa6.39□□□□□ -1.39
HMGB2-201ENST00000296503 C8orf87E5RJ46 101 aa6.39□□□□□ -1.39
HMGB2-201ENST00000296503 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
HMGB2-201ENST00000296503 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
HMGB2-201ENST00000296503 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
HMGB2-201ENST00000296503 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
HMGB2-201ENST00000296503 A8MUU9 505 aa6.37□□□□□ -1.39
HMGB2-201ENST00000296503 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
HMGB2-201ENST00000296503 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
HMGB2-201ENST00000296503 Q5W150 140 aa6.33□□□□□ -1.4
HMGB2-201ENST00000296503 A0A1B0GU69 56 aa6.32□□□□□ -1.4
HMGB2-201ENST00000296503 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
HMGB2-201ENST00000296503 UQCR11O14957 56 aa6.31□□□□□ -1.4
HMGB2-201ENST00000296503 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
HMGB2-201ENST00000296503 KRTAP19-2Q3LHN2 52 aa6.3□□□□□ -1.4
HMGB2-201ENST00000296503 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
HMGB2-201ENST00000296503 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
HMGB2-201ENST00000296503 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
HMGB2-201ENST00000296503 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
HMGB2-201ENST00000296503 MT1HP80294 61 aa6.23□□□□□ -1.41
HMGB2-201ENST00000296503 M0R2T5 61 aa6.19□□□□□ -1.42
HMGB2-201ENST00000296503 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
HMGB2-201ENST00000296503 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
HMGB2-201ENST00000296503 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
HMGB2-201ENST00000296503 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
HMGB2-201ENST00000296503 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
HMGB2-201ENST00000296503 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.43
HMGB2-201ENST00000296503 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
HMGB2-201ENST00000296503 H3BS24 57 aa6.05□□□□□ -1.44
HMGB2-201ENST00000296503 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
HMGB2-201ENST00000296503 H0YAA0 97 aa5.95□□□□□ -1.46
HMGB2-201ENST00000296503 ROMO1P60602 79 aa5.93□□□□□ -1.46
HMGB2-201ENST00000296503 A0A1B0GU33 70 aa5.92□□□□□ -1.46
HMGB2-201ENST00000296503 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
HMGB2-201ENST00000296503 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.47
HMGB2-201ENST00000296503 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
HMGB2-201ENST00000296503 K7ERS5 55 aa5.86□□□□□ -1.47
HMGB2-201ENST00000296503 MT2AP02795 61 aa5.85□□□□□ -1.47
HMGB2-201ENST00000296503 KRTAP10-10P60014 251 aa5.83□□□□□ -1.48
HMGB2-201ENST00000296503 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
HMGB2-201ENST00000296503 MT1FP04733 61 aa5.79□□□□□ -1.48
HMGB2-201ENST00000296503 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
HMGB2-201ENST00000296503 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
HMGB2-201ENST00000296503 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
HMGB2-201ENST00000296503 S4R3F8 94 aa5.72□□□□□ -1.49
HMGB2-201ENST00000296503 P0C880 135 aa5.68□□□□□ -1.5
HMGB2-201ENST00000296503 LCE2BO14633 110 aa5.66□□□□□ -1.5
HMGB2-201ENST00000296503 USH2AO75445 5202 aa5.61□□□□□ -1.51
HMGB2-201ENST00000296503 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
HMGB2-201ENST00000296503 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
HMGB2-201ENST00000296503 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
HMGB2-201ENST00000296503 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
HMGB2-201ENST00000296503 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
HMGB2-201ENST00000296503 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
HMGB2-201ENST00000296503 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
HMGB2-201ENST00000296503 SPRR2GQ9BYE4 73 aa5.42□□□□□ -1.54
HMGB2-201ENST00000296503 A0A0D9SG42 100 aa5.4□□□□□ -1.55
HMGB2-201ENST00000296503 NDUFAF8A1L188 74 aa5.4□□□□□ -1.55
HMGB2-201ENST00000296503 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
HMGB2-201ENST00000296503 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
HMGB2-201ENST00000296503 M0QZ58 72 aa5.39□□□□□ -1.55
HMGB2-201ENST00000296503 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
HMGB2-201ENST00000296503 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
HMGB2-201ENST00000296503 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
HMGB2-201ENST00000296503 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
HMGB2-201ENST00000296503 MT1BP07438 61 aa5.35□□□□□ -1.55
HMGB2-201ENST00000296503 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
HMGB2-201ENST00000296503 R4GN34 69 aa5.26□□□□□ -1.57
HMGB2-201ENST00000296503 KRTAP10-5P60370 271 aa5.21□□□□□ -1.58
HMGB2-201ENST00000296503 MACF1Q9UPN3 7388 aaKnown RBP5.19□□□□□ -1.58
HMGB2-201ENST00000296503 PLAC4Q8WY50 150 aa5.19□□□□□ -1.58
HMGB2-201ENST00000296503 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
HMGB2-201ENST00000296503 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
HMGB2-201ENST00000296503 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
HMGB2-201ENST00000296503 KRTAP4-6Q9BYQ5 205 aa5.1□□□□□ -1.59
HMGB2-201ENST00000296503 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
HMGB2-201ENST00000296503 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
HMGB2-201ENST00000296503 MT1XP80297 61 aa5.05□□□□□ -1.6
HMGB2-201ENST00000296503 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
HMGB2-201ENST00000296503 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
HMGB2-201ENST00000296503 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
HMGB2-201ENST00000296503 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
HMGB2-201ENST00000296503 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
HMGB2-201ENST00000296503 CAMK2N1Q7Z7J9 78 aa4.88□□□□□ -1.63
HMGB2-201ENST00000296503 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
HMGB2-201ENST00000296503 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
HMGB2-201ENST00000296503 KMT2DO14686 5537 aa4.83□□□□□ -1.64
HMGB2-201ENST00000296503 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
HMGB2-201ENST00000296503 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
HMGB2-201ENST00000296503 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
HMGB2-201ENST00000296503 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
HMGB2-201ENST00000296503 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms