RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 COX8CQ7Z4L0 72 aa1.6□□□□□ -2.15
SEMA3D-201ENST00000284136 HUWE1Q7Z6Z7 4374 aaKnown RBP1.6□□□□□ -2.15
SEMA3D-201ENST00000284136 LINC00643Q86TS7 51 aa1.6□□□□□ -2.15
SEMA3D-201ENST00000284136 KRTAP15-1Q3LI76 137 aa1.6□□□□□ -2.15
SEMA3D-201ENST00000284136 F8W1H4 67 aa1.59□□□□□ -2.15
SEMA3D-201ENST00000284136 SPRR1AP35321 89 aa1.59□□□□□ -2.16
SEMA3D-201ENST00000284136 V9GYY9 64 aa1.59□□□□□ -2.16
SEMA3D-201ENST00000284136 HERC2O95714 4834 aa1.59□□□□□ -2.16
SEMA3D-201ENST00000284136 DNAH1Q9P2D7 4330 aa1.58□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP10-12P60413 245 aa1.58□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP5-3Q6L8H2 238 aa1.58□□□□□ -2.16
SEMA3D-201ENST00000284136 FAT3Q8TDW7 4589 aa1.58□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP7-1Q8IUC3 87 aa1.58□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
SEMA3D-201ENST00000284136 A0A1B0GW54 56 aa1.57□□□□□ -2.16
SEMA3D-201ENST00000284136 H3BPC8 53 aa1.56□□□□□ -2.16
SEMA3D-201ENST00000284136 COA6Q5JTJ3 125 aaKnown RBP1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 LOC110117498A0A087WWA1 95 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP4-1Q9BYQ7 146 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 A8MU10 97 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 Q1T7F1 81 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP2-2Q9BYT5 123 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
SEMA3D-201ENST00000284136 MT2AP02795 61 aa1.54□□□□□ -2.16
SEMA3D-201ENST00000284136 ROMO1P60602 79 aa1.54□□□□□ -2.16
SEMA3D-201ENST00000284136 RYR3Q15413 4870 aa1.53□□□□□ -2.17
SEMA3D-201ENST00000284136 ZNF469Q96JG9 3925 aaPredicted RBP1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 PRKDCP78527 4128 aaKnown RBP1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 CSMD3Q7Z407 3707 aa1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 MT1FP04733 61 aa1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 KRTAP5-9P26371 169 aa1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 DLEU1O43261 78 aa1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 KRTAP10-5P60370 271 aa1.52□□□□□ -2.17
SEMA3D-201ENST00000284136 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
SEMA3D-201ENST00000284136 DNAH9Q9NYC9 4486 aa1.51□□□□□ -2.17
SEMA3D-201ENST00000284136 PCP4P48539 62 aa1.51□□□□□ -2.17
SEMA3D-201ENST00000284136 FAM240AA0A1B0GVK7 77 aa1.51□□□□□ -2.17
SEMA3D-201ENST00000284136 KRTAP9-8Q9BYQ0 159 aa1.5□□□□□ -2.17
SEMA3D-201ENST00000284136 FRAS1Q86XX4 4008 aa1.5□□□□□ -2.17
SEMA3D-201ENST00000284136 PLECQ15149 4684 aaKnown RBP1.5□□□□□ -2.17
SEMA3D-201ENST00000284136 KRTAP12-2P59991 146 aa1.49□□□□□ -2.17
SEMA3D-201ENST00000284136 A0A096LNJ9 63 aa1.49□□□□□ -2.17
SEMA3D-201ENST00000284136 VPS13BQ7Z7G8 4022 aa1.49□□□□□ -2.17
SEMA3D-201ENST00000284136 LCE5AQ5TCM9 118 aa1.49□□□□□ -2.17
SEMA3D-201ENST00000284136 SPANXA2-OT1Q8N9U9 137 aa1.49□□□□□ -2.17
SEMA3D-201ENST00000284136 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
SEMA3D-201ENST00000284136 PRO0461Q9UI25 63 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 KIAA1109Q2LD37 5005 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 PYY3Q5JQD4 70 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 YPEL4Q96NS1 127 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 FAT2Q9NYQ8 4349 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 PKHD1L1Q86WI1 4243 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 GPR98Q8WXG9 6306 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 URB1-AS1Q96HZ7 61 aa1.48□□□□□ -2.17
SEMA3D-201ENST00000284136 PMAIP1Q13794 54 aa1.47□□□□□ -2.17
SEMA3D-201ENST00000284136 PCLOQ9Y6V0 5065 aa1.47□□□□□ -2.17
SEMA3D-201ENST00000284136 LCE3AQ5TA76 89 aa1.46□□□□□ -2.17
SEMA3D-201ENST00000284136 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
SEMA3D-201ENST00000284136 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
SEMA3D-201ENST00000284136 LCE1FQ5T754 118 aa1.46□□□□□ -2.18
SEMA3D-201ENST00000284136 LCE1AQ5T7P2 110 aa1.46□□□□□ -2.18
SEMA3D-201ENST00000284136 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
SEMA3D-201ENST00000284136 DNAH11Q96DT5 4516 aa1.46□□□□□ -2.18
SEMA3D-201ENST00000284136 LCE1DQ5T752 114 aa1.45□□□□□ -2.18
SEMA3D-201ENST00000284136 EPPK1P58107 5090 aaKnown RBP1.45□□□□□ -2.18
SEMA3D-201ENST00000284136 PKHD1P08F94 4074 aa1.45□□□□□ -2.18
SEMA3D-201ENST00000284136 ATP5EP56381 51 aaPredicted RBP1.44□□□□□ -2.18
SEMA3D-201ENST00000284136 A0A0A0MQY5 61 aa1.43□□□□□ -2.18
SEMA3D-201ENST00000284136 DYNC2H1Q8NCM8 4307 aaKnown RBP1.43□□□□□ -2.18
SEMA3D-201ENST00000284136 HERC1Q15751 4861 aa1.42□□□□□ -2.18
SEMA3D-201ENST00000284136 LYSTQ99698 3801 aa1.42□□□□□ -2.18
SEMA3D-201ENST00000284136 DNAH7Q8WXX0 4024 aa1.41□□□□□ -2.18
SEMA3D-201ENST00000284136 ANK2Q01484 3957 aa1.41□□□□□ -2.18
SEMA3D-201ENST00000284136 NEBP20929 6669 aa1.41□□□□□ -2.18
SEMA3D-201ENST00000284136 DNAH10Q8IVF4 4471 aa1.4□□□□□ -2.19
SEMA3D-201ENST00000284136 SACSQ9NZJ4 4579 aa1.39□□□□□ -2.19
SEMA3D-201ENST00000284136 LRP1BQ9NZR2 4599 aa1.39□□□□□ -2.19
SEMA3D-201ENST00000284136 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
SEMA3D-201ENST00000284136 LINC00310P59036 64 aa1.39□□□□□ -2.19
SEMA3D-201ENST00000284136 KMT2AQ03164 3969 aa1.39□□□□□ -2.19
SEMA3D-201ENST00000284136 HSPG2P98160 4391 aa1.39□□□□□ -2.19
SEMA3D-201ENST00000284136 KRTAP4-11Q9BYQ6 195 aa1.38□□□□□ -2.19
SEMA3D-201ENST00000284136 FAT1Q14517 4588 aa1.38□□□□□ -2.19
SEMA3D-201ENST00000284136 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
SEMA3D-201ENST00000284136 MT1GP13640 62 aa1.37□□□□□ -2.19
SEMA3D-201ENST00000284136 DYNC1H1Q14204 4646 aaKnown RBP1.37□□□□□ -2.19
SEMA3D-201ENST00000284136 RYR2Q92736 4967 aa1.36□□□□□ -2.19
SEMA3D-201ENST00000284136 LPAP08519 4548 aa1.36□□□□□ -2.19
SEMA3D-201ENST00000284136 MACF1Q9UPN3 7388 aaKnown RBP1.36□□□□□ -2.19
SEMA3D-201ENST00000284136 DNAH17Q9UFH2 4485 aa1.36□□□□□ -2.19
SEMA3D-201ENST00000284136 COX7CP15954 63 aa1.35□□□□□ -2.19
SEMA3D-201ENST00000284136 UBR4Q5T4S7 5183 aa1.35□□□□□ -2.19
SEMA3D-201ENST00000284136 KTN1-AS1Q86SY8 53 aa1.35□□□□□ -2.19
SEMA3D-201ENST00000284136 KRTAP23-1A1A580 65 aa1.35□□□□□ -2.19
SEMA3D-201ENST00000284136 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
SEMA3D-201ENST00000284136 STARD9Q9P2P6 4700 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 859.7 ms