RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 A6NED7 52 aa6.45□□□□□ -1.38
NIP7-201ENST00000254940 A6NN06 94 aa6.45□□□□□ -1.38
NIP7-201ENST00000254940 HRES1P13985 223 aa6.45□□□□□ -1.38
NIP7-201ENST00000254940 COA5Q86WW8 74 aa6.43□□□□□ -1.38
NIP7-201ENST00000254940 RPL37P61927 97 aaKnown RBP6.41□□□□□ -1.38
NIP7-201ENST00000254940 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.39
NIP7-201ENST00000254940 KRTAP4-1Q9BYQ7 146 aa6.4□□□□□ -1.39
NIP7-201ENST00000254940 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
NIP7-201ENST00000254940 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
NIP7-201ENST00000254940 A8MUU9 505 aa6.39□□□□□ -1.39
NIP7-201ENST00000254940 MUC17Q685J3 4493 aa6.34□□□□□ -1.39
NIP7-201ENST00000254940 C7orf65Q6ZTY9 151 aa6.34□□□□□ -1.39
NIP7-201ENST00000254940 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.4
NIP7-201ENST00000254940 SPINK7P58062 85 aa6.33□□□□□ -1.4
NIP7-201ENST00000254940 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
NIP7-201ENST00000254940 ACYP2P14621 99 aa6.26□□□□□ -1.41
NIP7-201ENST00000254940 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
NIP7-201ENST00000254940 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
NIP7-201ENST00000254940 LINC01554Q52M75 96 aa6.2□□□□□ -1.42
NIP7-201ENST00000254940 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
NIP7-201ENST00000254940 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
NIP7-201ENST00000254940 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
NIP7-201ENST00000254940 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
NIP7-201ENST00000254940 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
NIP7-201ENST00000254940 A0A1B0GU69 56 aa6.04□□□□□ -1.44
NIP7-201ENST00000254940 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
NIP7-201ENST00000254940 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
NIP7-201ENST00000254940 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
NIP7-201ENST00000254940 KRTAP3-3Q9BYR6 98 aa5.99□□□□□ -1.45
NIP7-201ENST00000254940 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
NIP7-201ENST00000254940 MT1HP80294 61 aa5.97□□□□□ -1.45
NIP7-201ENST00000254940 M0R2T5 61 aa5.96□□□□□ -1.45
NIP7-201ENST00000254940 UQCR11O14957 56 aa5.96□□□□□ -1.45
NIP7-201ENST00000254940 S4R3F8 94 aa5.91□□□□□ -1.46
NIP7-201ENST00000254940 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.47
NIP7-201ENST00000254940 LCE2AQ5TA79 106 aaPredicted RBP5.88□□□□□ -1.47
NIP7-201ENST00000254940 KRTAP10-6P60371 365 aaPredicted RBP5.82□□□□□ -1.48
NIP7-201ENST00000254940 H0YAA0 97 aa5.8□□□□□ -1.48
NIP7-201ENST00000254940 P0C880 135 aa5.8□□□□□ -1.48
NIP7-201ENST00000254940 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
NIP7-201ENST00000254940 A0A1B0GU33 70 aa5.79□□□□□ -1.48
NIP7-201ENST00000254940 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
NIP7-201ENST00000254940 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
NIP7-201ENST00000254940 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
NIP7-201ENST00000254940 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
NIP7-201ENST00000254940 ROMO1P60602 79 aa5.74□□□□□ -1.49
NIP7-201ENST00000254940 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
NIP7-201ENST00000254940 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
NIP7-201ENST00000254940 A0A0D9SG42 100 aa5.69□□□□□ -1.5
NIP7-201ENST00000254940 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
NIP7-201ENST00000254940 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
NIP7-201ENST00000254940 MT2AP02795 61 aa5.67□□□□□ -1.5
NIP7-201ENST00000254940 MT1FP04733 61 aa5.66□□□□□ -1.5
NIP7-201ENST00000254940 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
NIP7-201ENST00000254940 KRTAP10-10P60014 251 aa5.65□□□□□ -1.51
NIP7-201ENST00000254940 K7ERS5 55 aa5.64□□□□□ -1.51
NIP7-201ENST00000254940 FSIP2Q5CZC0 6907 aa5.61□□□□□ -1.51
NIP7-201ENST00000254940 M0QZ58 72 aa5.52□□□□□ -1.53
NIP7-201ENST00000254940 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
NIP7-201ENST00000254940 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
NIP7-201ENST00000254940 R4GN34 69 aa5.5□□□□□ -1.53
NIP7-201ENST00000254940 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
NIP7-201ENST00000254940 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
NIP7-201ENST00000254940 USH2AO75445 5202 aa5.48□□□□□ -1.53
NIP7-201ENST00000254940 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
NIP7-201ENST00000254940 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
NIP7-201ENST00000254940 LCE2BO14633 110 aa5.44□□□□□ -1.54
NIP7-201ENST00000254940 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
NIP7-201ENST00000254940 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
NIP7-201ENST00000254940 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
NIP7-201ENST00000254940 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
NIP7-201ENST00000254940 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
NIP7-201ENST00000254940 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.56
NIP7-201ENST00000254940 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
NIP7-201ENST00000254940 MT1BP07438 61 aa5.26□□□□□ -1.57
NIP7-201ENST00000254940 KRTAP19-8Q3LI54 63 aa5.21□□□□□ -1.58
NIP7-201ENST00000254940 CRCT1Q9UGL9 99 aa5.19□□□□□ -1.58
NIP7-201ENST00000254940 FCGBPQ9Y6R7 5405 aaPredicted RBP5.15□□□□□ -1.59
NIP7-201ENST00000254940 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
NIP7-201ENST00000254940 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
NIP7-201ENST00000254940 KMT2DO14686 5537 aa5.06□□□□□ -1.6
NIP7-201ENST00000254940 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
NIP7-201ENST00000254940 MT1XP80297 61 aa5.03□□□□□ -1.6
NIP7-201ENST00000254940 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
NIP7-201ENST00000254940 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
NIP7-201ENST00000254940 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
NIP7-201ENST00000254940 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
NIP7-201ENST00000254940 TNP1P09430 55 aa4.87□□□□□ -1.63
NIP7-201ENST00000254940 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
NIP7-201ENST00000254940 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
NIP7-201ENST00000254940 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
NIP7-201ENST00000254940 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
NIP7-201ENST00000254940 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
NIP7-201ENST00000254940 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
NIP7-201ENST00000254940 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
NIP7-201ENST00000254940 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
NIP7-201ENST00000254940 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.66
NIP7-201ENST00000254940 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
NIP7-201ENST00000254940 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
NIP7-201ENST00000254940 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms