RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MRPL34Q9BQ48 92 aaKnown RBP10.11□□□□□ -0.79
NEDD8-201ENST00000250495 ATP5EP56381 51 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-201ENST00000250495 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
NEDD8-201ENST00000250495 H0Y9P7 68 aa10.05□□□□□ -0.8
NEDD8-201ENST00000250495 KRTAP19-6Q3LI70 58 aa10.05□□□□□ -0.8
NEDD8-201ENST00000250495 RPS28P62857 69 aaKnown RBP10.03□□□□□ -0.8
NEDD8-201ENST00000250495 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
NEDD8-201ENST00000250495 NDUFS5O43920 106 aa9.99□□□□□ -0.81
NEDD8-201ENST00000250495 LINC00208Q96KT6 92 aa9.99□□□□□ -0.81
NEDD8-201ENST00000250495 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
NEDD8-201ENST00000250495 SERP1Q9Y6X1 66 aa9.93□□□□□ -0.82
NEDD8-201ENST00000250495 MACF1Q9UPN3 7388 aaKnown RBP9.92□□□□□ -0.82
NEDD8-201ENST00000250495 IGKV2D-30A0A075B6S6 120 aa9.9□□□□□ -0.82
NEDD8-201ENST00000250495 IGKV2-30P06310 120 aa9.9□□□□□ -0.82
NEDD8-201ENST00000250495 SPANXA2-OT1Q8N9U9 137 aa9.89□□□□□ -0.83
NEDD8-201ENST00000250495 C7orf65Q6ZTY9 151 aa9.88□□□□□ -0.83
NEDD8-201ENST00000250495 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
NEDD8-201ENST00000250495 CYP4F30PQ9H0H9 118 aa9.86□□□□□ -0.83
NEDD8-201ENST00000250495 SYNE2Q8WXH0 6885 aaKnown RBP9.86□□□□□ -0.83
NEDD8-201ENST00000250495 Q5W150 140 aa9.85□□□□□ -0.83
NEDD8-201ENST00000250495 C4orf26Q17RF5 130 aa9.74□□□□□ -0.85
NEDD8-201ENST00000250495 KRTAP6-3Q3LI67 103 aa9.72□□□□□ -0.85
NEDD8-201ENST00000250495 SMIM26A0A096LP01 95 aa9.69□□□□□ -0.86
NEDD8-201ENST00000250495 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
NEDD8-201ENST00000250495 KRTAP3-1Q9BYR8 98 aa9.58□□□□□ -0.88
NEDD8-201ENST00000250495 S4R3F8 94 aa9.58□□□□□ -0.88
NEDD8-201ENST00000250495 COA5Q86WW8 74 aa9.53□□□□□ -0.88
NEDD8-201ENST00000250495 A6NN06 94 aa9.52□□□□□ -0.89
NEDD8-201ENST00000250495 DMAC1Q96GE9 116 aa9.52□□□□□ -0.89
NEDD8-201ENST00000250495 Q5VV11 94 aa9.51□□□□□ -0.89
NEDD8-201ENST00000250495 LCA10Q71F78 164 aa9.5□□□□□ -0.89
NEDD8-201ENST00000250495 MT1BP07438 61 aa9.48□□□□□ -0.89
NEDD8-201ENST00000250495 ACYP2P14621 99 aa9.48□□□□□ -0.89
NEDD8-201ENST00000250495 SPRR2GQ9BYE4 73 aa9.48□□□□□ -0.89
NEDD8-201ENST00000250495 Q1T7F1 81 aa9.46□□□□□ -0.9
NEDD8-201ENST00000250495 KRTAP19-8Q3LI54 63 aa9.46□□□□□ -0.9
NEDD8-201ENST00000250495 V9GYY9 64 aa9.45□□□□□ -0.9
NEDD8-201ENST00000250495 A8MUN3 132 aa9.4□□□□□ -0.9
NEDD8-201ENST00000250495 KRTAP10-5P60370 271 aa9.34□□□□□ -0.91
NEDD8-201ENST00000250495 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
NEDD8-201ENST00000250495 CHKB-CPT1BH3BT56 60 aa9.31□□□□□ -0.92
NEDD8-201ENST00000250495 CRIPTQ9P021 101 aa9.28□□□□□ -0.92
NEDD8-201ENST00000250495 NEBP20929 6669 aa9.28□□□□□ -0.92
NEDD8-201ENST00000250495 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
NEDD8-201ENST00000250495 MUC12Q9UKN1 5478 aa9.23□□□□□ -0.93
NEDD8-201ENST00000250495 PSPHP1O15172 72 aa9.17□□□□□ -0.94
NEDD8-201ENST00000250495 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
NEDD8-201ENST00000250495 KRTAP5-9P26371 169 aa9.16□□□□□ -0.94
NEDD8-201ENST00000250495 SPTSSBQ8NFR3 76 aa9.15□□□□□ -0.94
NEDD8-201ENST00000250495 H0YAA0 97 aa9.1□□□□□ -0.95
NEDD8-201ENST00000250495 KRTAP20-1Q3LI63 56 aa9.1□□□□□ -0.95
NEDD8-201ENST00000250495 A0A1B0GU69 56 aa9□□□□□ -0.97
NEDD8-201ENST00000250495 KMT2DO14686 5537 aa8.99□□□□□ -0.97
NEDD8-201ENST00000250495 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
NEDD8-201ENST00000250495 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
NEDD8-201ENST00000250495 ADM2Q7Z4H4 148 aa8.98□□□□□ -0.97
NEDD8-201ENST00000250495 A6NED7 52 aa8.94□□□□□ -0.98
NEDD8-201ENST00000250495 PRO2289Q9P1D8 64 aa8.94□□□□□ -0.98
NEDD8-201ENST00000250495 SEC61GP60059 68 aa8.92□□□□□ -0.98
NEDD8-201ENST00000250495 MDN1Q9NU22 5596 aa8.92□□□□□ -0.98
NEDD8-201ENST00000250495 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
NEDD8-201ENST00000250495 CDC42SE1Q9NRR8 79 aa8.87□□□□□ -0.99
NEDD8-201ENST00000250495 KRTAP2-3P0C7H8 128 aa8.83□□□□□ -1
NEDD8-201ENST00000250495 MT1XP80297 61 aa8.83□□□□□ -1
NEDD8-201ENST00000250495 SPRR2FQ96RM1 72 aa8.83□□□□□ -1
NEDD8-201ENST00000250495 KRTAP2-4Q9BYR9 128 aa8.83□□□□□ -1
NEDD8-201ENST00000250495 UQCR11O14957 56 aa8.8□□□□□ -1
NEDD8-201ENST00000250495 SVIPQ8NHG7 77 aa8.8□□□□□ -1
NEDD8-201ENST00000250495 R4GN34 69 aa8.8□□□□□ -1
NEDD8-201ENST00000250495 SPRR2EP22531 72 aa8.76□□□□□ -1.01
NEDD8-201ENST00000250495 SPRR2BP35325 72 aa8.76□□□□□ -1.01
NEDD8-201ENST00000250495 SPRR2AP35326 72 aa8.76□□□□□ -1.01
NEDD8-201ENST00000250495 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
NEDD8-201ENST00000250495 KRTAP8-1Q8IUC2 63 aa8.73□□□□□ -1.01
NEDD8-201ENST00000250495 P0C880 135 aa8.72□□□□□ -1.01
NEDD8-201ENST00000250495 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
NEDD8-201ENST00000250495 MIR22HGQ0VDD5 57 aa8.7□□□□□ -1.02
NEDD8-201ENST00000250495 A8MU10 97 aa8.69□□□□□ -1.02
NEDD8-201ENST00000250495 M0QZ58 72 aa8.69□□□□□ -1.02
NEDD8-201ENST00000250495 A0A1B0GU33 70 aa8.66□□□□□ -1.02
NEDD8-201ENST00000250495 LCE1AQ5T7P2 110 aa8.6□□□□□ -1.03
NEDD8-201ENST00000250495 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
NEDD8-201ENST00000250495 LINC01554Q52M75 96 aa8.58□□□□□ -1.04
NEDD8-201ENST00000250495 KRTAP2-2Q9BYT5 123 aa8.54□□□□□ -1.04
NEDD8-201ENST00000250495 KRTAP2-1Q9BYU5 128 aa8.54□□□□□ -1.04
NEDD8-201ENST00000250495 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
NEDD8-201ENST00000250495 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
NEDD8-201ENST00000250495 PMAIP1Q13794 54 aa8.52□□□□□ -1.05
NEDD8-201ENST00000250495 SPRR2DP22532 72 aa8.47□□□□□ -1.05
NEDD8-201ENST00000250495 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
NEDD8-201ENST00000250495 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
NEDD8-201ENST00000250495 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
NEDD8-201ENST00000250495 K7ERS5 55 aa8.32□□□□□ -1.08
NEDD8-201ENST00000250495 KTN1-AS1Q86SY8 53 aa8.3□□□□□ -1.08
NEDD8-201ENST00000250495 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
NEDD8-201ENST00000250495 A0A0D9SG42 100 aa8.19□□□□□ -1.1
NEDD8-201ENST00000250495 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
NEDD8-201ENST00000250495 CAMK2N1Q7Z7J9 78 aa8.05□□□□□ -1.12
NEDD8-201ENST00000250495 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
NEDD8-201ENST00000250495 ROMO1P60602 79 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms