RNA–Protein interactions for RNA: ENST00000247001.9

SUGP1-201, Transcript of SURP and G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUGP1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-201ENST00000247001 SPINK1P00995 79 aa6.96□□□□□ -1.3
SUGP1-201ENST00000247001 J3QL48 77 aa6.93□□□□□ -1.3
SUGP1-201ENST00000247001 NOTCH2NLQ7Z3S9 236 aa6.92□□□□□ -1.3
SUGP1-201ENST00000247001 P0C880 135 aa6.91□□□□□ -1.3
SUGP1-201ENST00000247001 Q5W150 140 aa6.9□□□□□ -1.31
SUGP1-201ENST00000247001 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
SUGP1-201ENST00000247001 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
SUGP1-201ENST00000247001 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
SUGP1-201ENST00000247001 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
SUGP1-201ENST00000247001 RPS29P62273 56 aaKnown RBP6.85□□□□□ -1.31
SUGP1-201ENST00000247001 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
SUGP1-201ENST00000247001 LRP2P98164 4655 aa6.84□□□□□ -1.32
SUGP1-201ENST00000247001 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
SUGP1-201ENST00000247001 LPAP08519 4548 aa6.82□□□□□ -1.32
SUGP1-201ENST00000247001 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
SUGP1-201ENST00000247001 A8MUU9 505 aa6.73□□□□□ -1.33
SUGP1-201ENST00000247001 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
SUGP1-201ENST00000247001 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
SUGP1-201ENST00000247001 IGKV2D-30A0A075B6S6 120 aa6.71□□□□□ -1.34
SUGP1-201ENST00000247001 MUC2Q02817 5179 aa6.66□□□□□ -1.34
SUGP1-201ENST00000247001 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
SUGP1-201ENST00000247001 NDUFAF8A1L188 74 aa6.6□□□□□ -1.35
SUGP1-201ENST00000247001 H0YAA0 97 aa6.59□□□□□ -1.35
SUGP1-201ENST00000247001 K7ERS5 55 aa6.57□□□□□ -1.36
SUGP1-201ENST00000247001 A0A1B0GU33 70 aa6.55□□□□□ -1.36
SUGP1-201ENST00000247001 XP32Q5T750 250 aa6.53□□□□□ -1.36
SUGP1-201ENST00000247001 H1FX-AS1Q4G0G2 97 aa6.51□□□□□ -1.37
SUGP1-201ENST00000247001 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
SUGP1-201ENST00000247001 CRIPTQ9P021 101 aa6.48□□□□□ -1.37
SUGP1-201ENST00000247001 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
SUGP1-201ENST00000247001 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
SUGP1-201ENST00000247001 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
SUGP1-201ENST00000247001 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
SUGP1-201ENST00000247001 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
SUGP1-201ENST00000247001 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
SUGP1-201ENST00000247001 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
SUGP1-201ENST00000247001 MUC17Q685J3 4493 aa6.26□□□□□ -1.41
SUGP1-201ENST00000247001 KRTAP3-1Q9BYR8 98 aa6.25□□□□□ -1.41
SUGP1-201ENST00000247001 KRTAP4-1Q9BYQ7 146 aa6.21□□□□□ -1.42
SUGP1-201ENST00000247001 C10orf95Q9H7T3 257 aa6.11□□□□□ -1.43
SUGP1-201ENST00000247001 KRTAP10-6P60371 365 aaPredicted RBP6.1□□□□□ -1.43
SUGP1-201ENST00000247001 S4R3F8 94 aa6.07□□□□□ -1.44
SUGP1-201ENST00000247001 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
SUGP1-201ENST00000247001 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
SUGP1-201ENST00000247001 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
SUGP1-201ENST00000247001 A0A0D9SG42 100 aa5.99□□□□□ -1.45
SUGP1-201ENST00000247001 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
SUGP1-201ENST00000247001 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
SUGP1-201ENST00000247001 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
SUGP1-201ENST00000247001 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
SUGP1-201ENST00000247001 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
SUGP1-201ENST00000247001 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
SUGP1-201ENST00000247001 FSIP2Q5CZC0 6907 aa5.88□□□□□ -1.47
SUGP1-201ENST00000247001 M0QZ58 72 aa5.86□□□□□ -1.47
SUGP1-201ENST00000247001 MT1HP80294 61 aa5.85□□□□□ -1.47
SUGP1-201ENST00000247001 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
SUGP1-201ENST00000247001 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
SUGP1-201ENST00000247001 M0R2T5 61 aa5.76□□□□□ -1.49
SUGP1-201ENST00000247001 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
SUGP1-201ENST00000247001 LORP23490 312 aaPredicted RBP5.68□□□□□ -1.5
SUGP1-201ENST00000247001 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
SUGP1-201ENST00000247001 USH2AO75445 5202 aa5.62□□□□□ -1.51
SUGP1-201ENST00000247001 R4GN34 69 aa5.62□□□□□ -1.51
SUGP1-201ENST00000247001 KRTAP9-8Q9BYQ0 159 aa5.57□□□□□ -1.52
SUGP1-201ENST00000247001 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
SUGP1-201ENST00000247001 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
SUGP1-201ENST00000247001 KRTAP10-10P60014 251 aa5.5□□□□□ -1.53
SUGP1-201ENST00000247001 MT2AP02795 61 aa5.49□□□□□ -1.53
SUGP1-201ENST00000247001 MT1FP04733 61 aa5.48□□□□□ -1.53
SUGP1-201ENST00000247001 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
SUGP1-201ENST00000247001 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
SUGP1-201ENST00000247001 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
SUGP1-201ENST00000247001 CRCT1Q9UGL9 99 aa5.4□□□□□ -1.55
SUGP1-201ENST00000247001 SPRR5A0A1B0GTR4 108 aa5.39□□□□□ -1.55
SUGP1-201ENST00000247001 LCE2BO14633 110 aa5.37□□□□□ -1.55
SUGP1-201ENST00000247001 KRTAP19-1Q8IUB9 90 aa5.37□□□□□ -1.55
SUGP1-201ENST00000247001 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
SUGP1-201ENST00000247001 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
SUGP1-201ENST00000247001 FCGBPQ9Y6R7 5405 aaPredicted RBP5.26□□□□□ -1.57
SUGP1-201ENST00000247001 INE1O15225 51 aa5.26□□□□□ -1.57
SUGP1-201ENST00000247001 TNP1P09430 55 aa5.19□□□□□ -1.58
SUGP1-201ENST00000247001 KRTAP19-8Q3LI54 63 aa5.18□□□□□ -1.58
SUGP1-201ENST00000247001 MT1BP07438 61 aa5.16□□□□□ -1.58
SUGP1-201ENST00000247001 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
SUGP1-201ENST00000247001 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
SUGP1-201ENST00000247001 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
SUGP1-201ENST00000247001 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
SUGP1-201ENST00000247001 MT1XP80297 61 aa5.02□□□□□ -1.61
SUGP1-201ENST00000247001 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
SUGP1-201ENST00000247001 KMT2DO14686 5537 aa4.96□□□□□ -1.62
SUGP1-201ENST00000247001 KRTAP9-7A8MTY7 169 aa4.92□□□□□ -1.62
SUGP1-201ENST00000247001 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
SUGP1-201ENST00000247001 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
SUGP1-201ENST00000247001 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SUGP1-201ENST00000247001 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
SUGP1-201ENST00000247001 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
SUGP1-201ENST00000247001 MDN1Q9NU22 5596 aa4.71□□□□□ -1.65
SUGP1-201ENST00000247001 KRTAP4-8A0A0G2JLE6 195 aa4.7□□□□□ -1.66
SUGP1-201ENST00000247001 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
SUGP1-201ENST00000247001 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms