RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 C9orf92A6NGG3 77 aa9.38□□□□□ -0.91
CDKN1B-201ENST00000228872 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
CDKN1B-201ENST00000228872 RYR1P21817 5038 aa9.38□□□□□ -0.91
CDKN1B-201ENST00000228872 Q5VSD8 79 aa9.35□□□□□ -0.91
CDKN1B-201ENST00000228872 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
CDKN1B-201ENST00000228872 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
CDKN1B-201ENST00000228872 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
CDKN1B-201ENST00000228872 TPRXLQ17RH7 258 aa9.24□□□□□ -0.93
CDKN1B-201ENST00000228872 KIAA1109Q2LD37 5005 aa9.24□□□□□ -0.93
CDKN1B-201ENST00000228872 SPINT4Q6UDR6 99 aa9.21□□□□□ -0.93
CDKN1B-201ENST00000228872 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
CDKN1B-201ENST00000228872 KRTAP13-4Q3LI77 160 aa9.2□□□□□ -0.94
CDKN1B-201ENST00000228872 TNXBP22105 4242 aa9.18□□□□□ -0.94
CDKN1B-201ENST00000228872 A0A0D9SG42 100 aa9.17□□□□□ -0.94
CDKN1B-201ENST00000228872 KRTAP10-8P60410 259 aa9.16□□□□□ -0.94
CDKN1B-201ENST00000228872 FAT3Q8TDW7 4589 aa9.15□□□□□ -0.94
CDKN1B-201ENST00000228872 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
CDKN1B-201ENST00000228872 C10orf95Q9H7T3 257 aa9.12□□□□□ -0.95
CDKN1B-201ENST00000228872 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
CDKN1B-201ENST00000228872 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
CDKN1B-201ENST00000228872 KRTAP15-1Q3LI76 137 aa9.07□□□□□ -0.96
CDKN1B-201ENST00000228872 NDUFAF8A1L188 74 aa9.03□□□□□ -0.96
CDKN1B-201ENST00000228872 MT1HL1P0DM35 61 aa9.01□□□□□ -0.97
CDKN1B-201ENST00000228872 S4R3F8 94 aa8.98□□□□□ -0.97
CDKN1B-201ENST00000228872 KRTAP4-5Q9BYR2 181 aa8.97□□□□□ -0.97
CDKN1B-201ENST00000228872 MYCBP2O75592 4640 aa8.96□□□□□ -0.98
CDKN1B-201ENST00000228872 BIRC6Q9NR09 4857 aa8.95□□□□□ -0.98
CDKN1B-201ENST00000228872 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
CDKN1B-201ENST00000228872 DMBT1Q9UGM3 2413 aaPredicted RBP8.93□□□□□ -0.98
CDKN1B-201ENST00000228872 HERC2O95714 4834 aa8.87□□□□□ -0.99
CDKN1B-201ENST00000228872 KRTAP12-1P59990 96 aa8.84□□□□□ -0.99
CDKN1B-201ENST00000228872 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
CDKN1B-201ENST00000228872 XP32Q5T750 250 aa8.8□□□□□ -1
CDKN1B-201ENST00000228872 J3QL48 77 aa8.67□□□□□ -1.02
CDKN1B-201ENST00000228872 M0QZ58 72 aa8.62□□□□□ -1.03
CDKN1B-201ENST00000228872 LRP2P98164 4655 aa8.54□□□□□ -1.04
CDKN1B-201ENST00000228872 LPAP08519 4548 aa8.51□□□□□ -1.05
CDKN1B-201ENST00000228872 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
CDKN1B-201ENST00000228872 PLAC4Q8WY50 150 aa8.42□□□□□ -1.06
CDKN1B-201ENST00000228872 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
CDKN1B-201ENST00000228872 A0A0A0MQY5 61 aa8.33□□□□□ -1.08
CDKN1B-201ENST00000228872 MUC17Q685J3 4493 aa8.31□□□□□ -1.08
CDKN1B-201ENST00000228872 R4GN34 69 aa8.31□□□□□ -1.08
CDKN1B-201ENST00000228872 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
CDKN1B-201ENST00000228872 HERC1Q15751 4861 aa8.27□□□□□ -1.09
CDKN1B-201ENST00000228872 HMCN2Q8NDA2 5059 aa8.25□□□□□ -1.09
CDKN1B-201ENST00000228872 LORP23490 312 aaPredicted RBP8.16□□□□□ -1.1
CDKN1B-201ENST00000228872 KRTAP4-1Q9BYQ7 146 aa8.16□□□□□ -1.1
CDKN1B-201ENST00000228872 PP632Q6XCG6 107 aa8.1□□□□□ -1.11
CDKN1B-201ENST00000228872 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
CDKN1B-201ENST00000228872 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
CDKN1B-201ENST00000228872 MUC2Q02817 5179 aa7.95□□□□□ -1.14
CDKN1B-201ENST00000228872 UBR4Q5T4S7 5183 aa7.8□□□□□ -1.16
CDKN1B-201ENST00000228872 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
CDKN1B-201ENST00000228872 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
CDKN1B-201ENST00000228872 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
CDKN1B-201ENST00000228872 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
CDKN1B-201ENST00000228872 TNP1P09430 55 aa7.72□□□□□ -1.17
CDKN1B-201ENST00000228872 KRTAP23-1A1A580 65 aa7.71□□□□□ -1.18
CDKN1B-201ENST00000228872 MT1HP80294 61 aa7.58□□□□□ -1.2
CDKN1B-201ENST00000228872 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
CDKN1B-201ENST00000228872 M0R2T5 61 aa7.47□□□□□ -1.21
CDKN1B-201ENST00000228872 PRO2289Q9P1D8 64 aa7.37□□□□□ -1.23
CDKN1B-201ENST00000228872 KRTAP9-8Q9BYQ0 159 aa7.32□□□□□ -1.24
CDKN1B-201ENST00000228872 MT2AP02795 61 aa7.3□□□□□ -1.24
CDKN1B-201ENST00000228872 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
CDKN1B-201ENST00000228872 MT1FP04733 61 aa7.25□□□□□ -1.25
CDKN1B-201ENST00000228872 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
CDKN1B-201ENST00000228872 KRTAP10-10P60014 251 aa7.22□□□□□ -1.25
CDKN1B-201ENST00000228872 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
CDKN1B-201ENST00000228872 INE1O15225 51 aa7.21□□□□□ -1.25
CDKN1B-201ENST00000228872 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
CDKN1B-201ENST00000228872 KRTAP8-1Q8IUC2 63 aa7.08□□□□□ -1.28
CDKN1B-201ENST00000228872 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
CDKN1B-201ENST00000228872 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
CDKN1B-201ENST00000228872 MT1BP07438 61 aa6.9□□□□□ -1.31
CDKN1B-201ENST00000228872 KRTAP12-3P60328 96 aa6.89□□□□□ -1.31
CDKN1B-201ENST00000228872 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
CDKN1B-201ENST00000228872 LCE2BO14633 110 aa6.83□□□□□ -1.32
CDKN1B-201ENST00000228872 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
CDKN1B-201ENST00000228872 MT1XP80297 61 aa6.8□□□□□ -1.32
CDKN1B-201ENST00000228872 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
CDKN1B-201ENST00000228872 USH2AO75445 5202 aa6.62□□□□□ -1.35
CDKN1B-201ENST00000228872 LCE2DQ5TA82 110 aaPredicted RBP6.55□□□□□ -1.36
CDKN1B-201ENST00000228872 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
CDKN1B-201ENST00000228872 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.37
CDKN1B-201ENST00000228872 SSPOA2VEC9 5147 aa6.44□□□□□ -1.38
CDKN1B-201ENST00000228872 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
CDKN1B-201ENST00000228872 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
CDKN1B-201ENST00000228872 KMT2DO14686 5537 aa6.31□□□□□ -1.4
CDKN1B-201ENST00000228872 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
CDKN1B-201ENST00000228872 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
CDKN1B-201ENST00000228872 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
CDKN1B-201ENST00000228872 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
CDKN1B-201ENST00000228872 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
CDKN1B-201ENST00000228872 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
CDKN1B-201ENST00000228872 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
CDKN1B-201ENST00000228872 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
CDKN1B-201ENST00000228872 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
CDKN1B-201ENST00000228872 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms