RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
TVP23C-201ENST00000225576 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
TVP23C-201ENST00000225576 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
TVP23C-201ENST00000225576 MUC17Q685J3 4493 aa8.43□□□□□ -1.06
TVP23C-201ENST00000225576 S4R3F8 94 aa8.37□□□□□ -1.07
TVP23C-201ENST00000225576 LCA10Q71F78 164 aa8.35□□□□□ -1.07
TVP23C-201ENST00000225576 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
TVP23C-201ENST00000225576 PSPHP1O15172 72 aa8.34□□□□□ -1.08
TVP23C-201ENST00000225576 PRR15LQ9BU68 103 aa8.33□□□□□ -1.08
TVP23C-201ENST00000225576 KRTAP19-2Q3LHN2 52 aa8.29□□□□□ -1.08
TVP23C-201ENST00000225576 Q5VV11 94 aa8.29□□□□□ -1.08
TVP23C-201ENST00000225576 A0A1B0GU69 56 aa8.27□□□□□ -1.09
TVP23C-201ENST00000225576 MUC2Q02817 5179 aa8.24□□□□□ -1.09
TVP23C-201ENST00000225576 SEC61GP60059 68 aa8.22□□□□□ -1.09
TVP23C-201ENST00000225576 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
TVP23C-201ENST00000225576 CSAG1Q6PB30 78 aa8.2□□□□□ -1.1
TVP23C-201ENST00000225576 A6NED7 52 aa8.09□□□□□ -1.11
TVP23C-201ENST00000225576 KRTAP9-2Q9BYQ4 174 aa8.09□□□□□ -1.11
TVP23C-201ENST00000225576 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
TVP23C-201ENST00000225576 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
TVP23C-201ENST00000225576 H0YAA0 97 aa8.05□□□□□ -1.12
TVP23C-201ENST00000225576 KRTAP10-6P60371 365 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-201ENST00000225576 UQCR11O14957 56 aa8.03□□□□□ -1.12
TVP23C-201ENST00000225576 BRK1Q8WUW1 75 aa8.03□□□□□ -1.12
TVP23C-201ENST00000225576 A0A1B0GU33 70 aa8.02□□□□□ -1.13
TVP23C-201ENST00000225576 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
TVP23C-201ENST00000225576 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
TVP23C-201ENST00000225576 P0C880 135 aa7.96□□□□□ -1.14
TVP23C-201ENST00000225576 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
TVP23C-201ENST00000225576 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
TVP23C-201ENST00000225576 KRTAP9-6A0A140TA67 174 aa7.93□□□□□ -1.14
TVP23C-201ENST00000225576 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
TVP23C-201ENST00000225576 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
TVP23C-201ENST00000225576 A8MU10 97 aa7.9□□□□□ -1.14
TVP23C-201ENST00000225576 MT1HP80294 61 aa7.9□□□□□ -1.14
TVP23C-201ENST00000225576 PRO0628Q9UI54 55 aa7.89□□□□□ -1.15
TVP23C-201ENST00000225576 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
TVP23C-201ENST00000225576 M0R2T5 61 aa7.81□□□□□ -1.16
TVP23C-201ENST00000225576 M0QZ58 72 aa7.8□□□□□ -1.16
TVP23C-201ENST00000225576 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
TVP23C-201ENST00000225576 R4GN34 69 aa7.72□□□□□ -1.17
TVP23C-201ENST00000225576 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
TVP23C-201ENST00000225576 A0A0D9SG42 100 aa7.66□□□□□ -1.18
TVP23C-201ENST00000225576 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
TVP23C-201ENST00000225576 KRTAP9-8Q9BYQ0 159 aa7.62□□□□□ -1.19
TVP23C-201ENST00000225576 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
TVP23C-201ENST00000225576 MT2AP02795 61 aa7.6□□□□□ -1.19
TVP23C-201ENST00000225576 K7ERS5 55 aa7.59□□□□□ -1.19
TVP23C-201ENST00000225576 CRCT1Q9UGL9 99 aa7.57□□□□□ -1.2
TVP23C-201ENST00000225576 A6NN06 94 aa7.56□□□□□ -1.2
TVP23C-201ENST00000225576 MT1FP04733 61 aa7.55□□□□□ -1.2
TVP23C-201ENST00000225576 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
TVP23C-201ENST00000225576 KRTAP10-10P60014 251 aa7.54□□□□□ -1.2
TVP23C-201ENST00000225576 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
TVP23C-201ENST00000225576 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
TVP23C-201ENST00000225576 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
TVP23C-201ENST00000225576 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
TVP23C-201ENST00000225576 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
TVP23C-201ENST00000225576 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
TVP23C-201ENST00000225576 KTN1-AS1Q86SY8 53 aa7.3□□□□□ -1.24
TVP23C-201ENST00000225576 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
TVP23C-201ENST00000225576 ROMO1P60602 79 aa7.27□□□□□ -1.25
TVP23C-201ENST00000225576 PLAC4Q8WY50 150 aa7.25□□□□□ -1.25
TVP23C-201ENST00000225576 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
TVP23C-201ENST00000225576 MT1BP07438 61 aa7.17□□□□□ -1.26
TVP23C-201ENST00000225576 LCE2BO14633 110 aa7.13□□□□□ -1.27
TVP23C-201ENST00000225576 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
TVP23C-201ENST00000225576 SSPOA2VEC9 5147 aa7.11□□□□□ -1.27
TVP23C-201ENST00000225576 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
TVP23C-201ENST00000225576 PRAC1Q96KF2 57 aa7.09□□□□□ -1.27
TVP23C-201ENST00000225576 USH2AO75445 5202 aa7.08□□□□□ -1.28
TVP23C-201ENST00000225576 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
TVP23C-201ENST00000225576 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.29
TVP23C-201ENST00000225576 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
TVP23C-201ENST00000225576 MT1XP80297 61 aa6.95□□□□□ -1.3
TVP23C-201ENST00000225576 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
TVP23C-201ENST00000225576 TNP1P09430 55 aa6.91□□□□□ -1.3
TVP23C-201ENST00000225576 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
TVP23C-201ENST00000225576 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
TVP23C-201ENST00000225576 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
TVP23C-201ENST00000225576 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
TVP23C-201ENST00000225576 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
TVP23C-201ENST00000225576 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
TVP23C-201ENST00000225576 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
TVP23C-201ENST00000225576 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
TVP23C-201ENST00000225576 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
TVP23C-201ENST00000225576 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
TVP23C-201ENST00000225576 KRTAP6-3Q3LI67 103 aa6.45□□□□□ -1.38
TVP23C-201ENST00000225576 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
TVP23C-201ENST00000225576 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
TVP23C-201ENST00000225576 NEBP20929 6669 aa6.36□□□□□ -1.39
TVP23C-201ENST00000225576 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
TVP23C-201ENST00000225576 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
TVP23C-201ENST00000225576 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
TVP23C-201ENST00000225576 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
TVP23C-201ENST00000225576 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
TVP23C-201ENST00000225576 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
TVP23C-201ENST00000225576 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
TVP23C-201ENST00000225576 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
TVP23C-201ENST00000225576 KMT2DO14686 5537 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms