RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
LAPTM4A-201ENST00000175091 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
LAPTM4A-201ENST00000175091 RBM12B-AS1Q9P1G2 102 aa7.85□□□□□ -1.15
LAPTM4A-201ENST00000175091 H1FX-AS1Q4G0G2 97 aa7.82□□□□□ -1.16
LAPTM4A-201ENST00000175091 LCA10Q71F78 164 aa7.8□□□□□ -1.16
LAPTM4A-201ENST00000175091 S4R3F8 94 aa7.79□□□□□ -1.16
LAPTM4A-201ENST00000175091 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
LAPTM4A-201ENST00000175091 A0A1B0GU69 56 aa7.76□□□□□ -1.17
LAPTM4A-201ENST00000175091 MUC2Q02817 5179 aa7.75□□□□□ -1.17
LAPTM4A-201ENST00000175091 KRTAP19-2Q3LHN2 52 aa7.69□□□□□ -1.18
LAPTM4A-201ENST00000175091 SEC61GP60059 68 aa7.66□□□□□ -1.18
LAPTM4A-201ENST00000175091 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
LAPTM4A-201ENST00000175091 A6NED7 52 aa7.65□□□□□ -1.18
LAPTM4A-201ENST00000175091 UBR4Q5T4S7 5183 aa7.65□□□□□ -1.19
LAPTM4A-201ENST00000175091 CSAG1Q6PB30 78 aa7.59□□□□□ -1.2
LAPTM4A-201ENST00000175091 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
LAPTM4A-201ENST00000175091 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
LAPTM4A-201ENST00000175091 UQCR11O14957 56 aa7.56□□□□□ -1.2
LAPTM4A-201ENST00000175091 A8MU10 97 aa7.55□□□□□ -1.2
LAPTM4A-201ENST00000175091 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
LAPTM4A-201ENST00000175091 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
LAPTM4A-201ENST00000175091 KRTAP10-6P60371 365 aaPredicted RBP7.54□□□□□ -1.2
LAPTM4A-201ENST00000175091 KRTAP3-2Q9BYR7 98 aa7.53□□□□□ -1.2
LAPTM4A-201ENST00000175091 A0A1B0GU33 70 aa7.49□□□□□ -1.21
LAPTM4A-201ENST00000175091 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
LAPTM4A-201ENST00000175091 H0YAA0 97 aa7.47□□□□□ -1.21
LAPTM4A-201ENST00000175091 MIR22HGQ0VDD5 57 aa7.47□□□□□ -1.21
LAPTM4A-201ENST00000175091 LCE2CQ5TA81 110 aa7.46□□□□□ -1.22
LAPTM4A-201ENST00000175091 ADM2Q7Z4H4 148 aa7.46□□□□□ -1.22
LAPTM4A-201ENST00000175091 FAT4Q6V0I7 4981 aa7.45□□□□□ -1.22
LAPTM4A-201ENST00000175091 P0C880 135 aa7.45□□□□□ -1.22
LAPTM4A-201ENST00000175091 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
LAPTM4A-201ENST00000175091 MT1HP80294 61 aa7.29□□□□□ -1.24
LAPTM4A-201ENST00000175091 M0QZ58 72 aa7.25□□□□□ -1.25
LAPTM4A-201ENST00000175091 PMAIP1Q13794 54 aa7.22□□□□□ -1.25
LAPTM4A-201ENST00000175091 A6NN06 94 aa7.2□□□□□ -1.26
LAPTM4A-201ENST00000175091 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
LAPTM4A-201ENST00000175091 A0A0D9SG42 100 aa7.18□□□□□ -1.26
LAPTM4A-201ENST00000175091 R4GN34 69 aa7.18□□□□□ -1.26
LAPTM4A-201ENST00000175091 M0R2T5 61 aa7.18□□□□□ -1.26
LAPTM4A-201ENST00000175091 K7ERS5 55 aa7.09□□□□□ -1.27
LAPTM4A-201ENST00000175091 CRIPTQ9P021 101 aa7.09□□□□□ -1.27
LAPTM4A-201ENST00000175091 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
LAPTM4A-201ENST00000175091 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
LAPTM4A-201ENST00000175091 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
LAPTM4A-201ENST00000175091 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
LAPTM4A-201ENST00000175091 MT2AP02795 61 aa7.03□□□□□ -1.28
LAPTM4A-201ENST00000175091 MT1FP04733 61 aa7□□□□□ -1.29
LAPTM4A-201ENST00000175091 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
LAPTM4A-201ENST00000175091 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
LAPTM4A-201ENST00000175091 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
LAPTM4A-201ENST00000175091 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
LAPTM4A-201ENST00000175091 KRTAP10-10P60014 251 aa6.93□□□□□ -1.3
LAPTM4A-201ENST00000175091 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
LAPTM4A-201ENST00000175091 ROMO1P60602 79 aa6.84□□□□□ -1.31
LAPTM4A-201ENST00000175091 PRAC1Q96KF2 57 aa6.78□□□□□ -1.32
LAPTM4A-201ENST00000175091 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
LAPTM4A-201ENST00000175091 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
LAPTM4A-201ENST00000175091 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
LAPTM4A-201ENST00000175091 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
LAPTM4A-201ENST00000175091 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
LAPTM4A-201ENST00000175091 C10orf95Q9H7T3 257 aa6.67□□□□□ -1.34
LAPTM4A-201ENST00000175091 MT1BP07438 61 aa6.65□□□□□ -1.34
LAPTM4A-201ENST00000175091 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
LAPTM4A-201ENST00000175091 LCE2BO14633 110 aa6.57□□□□□ -1.36
LAPTM4A-201ENST00000175091 MT1XP80297 61 aa6.46□□□□□ -1.38
LAPTM4A-201ENST00000175091 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
LAPTM4A-201ENST00000175091 USH2AO75445 5202 aa6.44□□□□□ -1.38
LAPTM4A-201ENST00000175091 TNP1P09430 55 aa6.43□□□□□ -1.38
LAPTM4A-201ENST00000175091 PRO2289Q9P1D8 64 aa6.34□□□□□ -1.4
LAPTM4A-201ENST00000175091 PP632Q6XCG6 107 aa6.31□□□□□ -1.4
LAPTM4A-201ENST00000175091 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
LAPTM4A-201ENST00000175091 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
LAPTM4A-201ENST00000175091 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
LAPTM4A-201ENST00000175091 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
LAPTM4A-201ENST00000175091 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
LAPTM4A-201ENST00000175091 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
LAPTM4A-201ENST00000175091 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
LAPTM4A-201ENST00000175091 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
LAPTM4A-201ENST00000175091 KMT2DO14686 5537 aa5.99□□□□□ -1.45
LAPTM4A-201ENST00000175091 H3BS24 57 aa5.99□□□□□ -1.45
LAPTM4A-201ENST00000175091 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
LAPTM4A-201ENST00000175091 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
LAPTM4A-201ENST00000175091 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
LAPTM4A-201ENST00000175091 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
LAPTM4A-201ENST00000175091 A0A0A0MQY5 61 aa5.9□□□□□ -1.46
LAPTM4A-201ENST00000175091 KRTAP12-3P60328 96 aa5.9□□□□□ -1.46
LAPTM4A-201ENST00000175091 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
LAPTM4A-201ENST00000175091 KRTAP19-5Q3LI72 72 aa5.84□□□□□ -1.47
LAPTM4A-201ENST00000175091 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
LAPTM4A-201ENST00000175091 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
LAPTM4A-201ENST00000175091 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
LAPTM4A-201ENST00000175091 MT1EP04732 61 aa5.65□□□□□ -1.5
LAPTM4A-201ENST00000175091 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.51
LAPTM4A-201ENST00000175091 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
LAPTM4A-201ENST00000175091 MT1LQ93083 61 aa5.55□□□□□ -1.52
LAPTM4A-201ENST00000175091 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
LAPTM4A-201ENST00000175091 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
LAPTM4A-201ENST00000175091 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
LAPTM4A-201ENST00000175091 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms