RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TRAV22A0A0B4J277 110 aa6.88□□□□□ -1.31
ERCC1-201ENST00000013807 LOC101927531A0A1B0GV80 90 aa6.88□□□□□ -1.31
ERCC1-201ENST00000013807 F8W1H4 67 aa6.88□□□□□ -1.31
ERCC1-201ENST00000013807 H0YAA0 97 aa6.88□□□□□ -1.31
ERCC1-201ENST00000013807 IMUPQ9GZP8 106 aa6.88□□□□□ -1.31
ERCC1-201ENST00000013807 KMT2DO14686 5537 aa6.87□□□□□ -1.31
ERCC1-201ENST00000013807 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
ERCC1-201ENST00000013807 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
ERCC1-201ENST00000013807 GTF2H5Q6ZYL4 71 aa6.85□□□□□ -1.31
ERCC1-201ENST00000013807 ETDBQ3ZM63 59 aa6.84□□□□□ -1.31
ERCC1-201ENST00000013807 NDUFC1O43677 76 aa6.79□□□□□ -1.32
ERCC1-201ENST00000013807 MDN1Q9NU22 5596 aa6.79□□□□□ -1.32
ERCC1-201ENST00000013807 UQCRQO14949 82 aa6.77□□□□□ -1.33
ERCC1-201ENST00000013807 ATOX1O00244 68 aa6.76□□□□□ -1.33
ERCC1-201ENST00000013807 ACYP1P07311 99 aa6.76□□□□□ -1.33
ERCC1-201ENST00000013807 K7ERU9 68 aa6.75□□□□□ -1.33
ERCC1-201ENST00000013807 A8MUN3 132 aa6.74□□□□□ -1.33
ERCC1-201ENST00000013807 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
ERCC1-201ENST00000013807 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
ERCC1-201ENST00000013807 H0Y9P7 68 aa6.71□□□□□ -1.34
ERCC1-201ENST00000013807 SCGB1A1P11684 91 aa6.71□□□□□ -1.34
ERCC1-201ENST00000013807 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
ERCC1-201ENST00000013807 KRTAP2-3P0C7H8 128 aa6.69□□□□□ -1.34
ERCC1-201ENST00000013807 ADM2Q7Z4H4 148 aa6.69□□□□□ -1.34
ERCC1-201ENST00000013807 KRTAP2-4Q9BYR9 128 aa6.69□□□□□ -1.34
ERCC1-201ENST00000013807 MT1XP80297 61 aa6.68□□□□□ -1.34
ERCC1-201ENST00000013807 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
ERCC1-201ENST00000013807 SPRR2FQ96RM1 72 aa6.63□□□□□ -1.35
ERCC1-201ENST00000013807 J3QR89 54 aa6.61□□□□□ -1.35
ERCC1-201ENST00000013807 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
ERCC1-201ENST00000013807 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
ERCC1-201ENST00000013807 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
ERCC1-201ENST00000013807 SPRR2EP22531 72 aa6.58□□□□□ -1.36
ERCC1-201ENST00000013807 SPRR2BP35325 72 aa6.58□□□□□ -1.36
ERCC1-201ENST00000013807 SPRR2AP35326 72 aa6.58□□□□□ -1.36
ERCC1-201ENST00000013807 LINC00643Q86TS7 51 aa6.56□□□□□ -1.36
ERCC1-201ENST00000013807 OCR1Q9BZK8 76 aa6.56□□□□□ -1.36
ERCC1-201ENST00000013807 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
ERCC1-201ENST00000013807 R4GN34 69 aa6.55□□□□□ -1.36
ERCC1-201ENST00000013807 P0C880 135 aa6.53□□□□□ -1.36
ERCC1-201ENST00000013807 MP68P56378 58 aa6.53□□□□□ -1.36
ERCC1-201ENST00000013807 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
ERCC1-201ENST00000013807 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
ERCC1-201ENST00000013807 H3BPC8 53 aa6.47□□□□□ -1.37
ERCC1-201ENST00000013807 M0QZ58 72 aa6.46□□□□□ -1.38
ERCC1-201ENST00000013807 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
ERCC1-201ENST00000013807 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
ERCC1-201ENST00000013807 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
ERCC1-201ENST00000013807 KRTAP4-8A0A0G2JLE6 195 aa6.43□□□□□ -1.38
ERCC1-201ENST00000013807 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
ERCC1-201ENST00000013807 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
ERCC1-201ENST00000013807 SPRR2DP22532 72 aa6.36□□□□□ -1.39
ERCC1-201ENST00000013807 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
ERCC1-201ENST00000013807 TRAV7A0A075B6U4 112 aa6.34□□□□□ -1.39
ERCC1-201ENST00000013807 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
ERCC1-201ENST00000013807 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
ERCC1-201ENST00000013807 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
ERCC1-201ENST00000013807 ACYP2P14621 99 aa6.25□□□□□ -1.41
ERCC1-201ENST00000013807 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
ERCC1-201ENST00000013807 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
ERCC1-201ENST00000013807 SPTSSBQ8NFR3 76 aa6.2□□□□□ -1.42
ERCC1-201ENST00000013807 MT-ATP8P03928 68 aa6.19□□□□□ -1.42
ERCC1-201ENST00000013807 SMIM20Q8N5G0 67 aa6.1□□□□□ -1.43
ERCC1-201ENST00000013807 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
ERCC1-201ENST00000013807 CHKB-CPT1BH3BT56 60 aa6.05□□□□□ -1.44
ERCC1-201ENST00000013807 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
ERCC1-201ENST00000013807 DSTQ03001 7570 aaKnown RBP6.02□□□□□ -1.45
ERCC1-201ENST00000013807 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
ERCC1-201ENST00000013807 KRTAP19-7Q3SYF9 63 aa6□□□□□ -1.45
ERCC1-201ENST00000013807 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
ERCC1-201ENST00000013807 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
ERCC1-201ENST00000013807 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
ERCC1-201ENST00000013807 TMEM258P61165 79 aa5.95□□□□□ -1.46
ERCC1-201ENST00000013807 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
ERCC1-201ENST00000013807 SNURFQ9Y675 71 aa5.94□□□□□ -1.46
ERCC1-201ENST00000013807 MT1EP04732 61 aa5.93□□□□□ -1.46
ERCC1-201ENST00000013807 COX7CP15954 63 aa5.91□□□□□ -1.46
ERCC1-201ENST00000013807 SERP2Q8N6R1 65 aa5.84□□□□□ -1.47
ERCC1-201ENST00000013807 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
ERCC1-201ENST00000013807 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
ERCC1-201ENST00000013807 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
ERCC1-201ENST00000013807 MT1GP13640 62 aa5.79□□□□□ -1.48
ERCC1-201ENST00000013807 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
ERCC1-201ENST00000013807 A0A0D9SG42 100 aa5.78□□□□□ -1.48
ERCC1-201ENST00000013807 COA5Q86WW8 74 aa5.77□□□□□ -1.49
ERCC1-201ENST00000013807 CYSTM1Q9H1C7 97 aa5.77□□□□□ -1.49
ERCC1-201ENST00000013807 SEC61GP60059 68 aa5.75□□□□□ -1.49
ERCC1-201ENST00000013807 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
ERCC1-201ENST00000013807 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
ERCC1-201ENST00000013807 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
ERCC1-201ENST00000013807 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
ERCC1-201ENST00000013807 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
ERCC1-201ENST00000013807 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
ERCC1-201ENST00000013807 A0A1B0GU33 70 aa5.7□□□□□ -1.5
ERCC1-201ENST00000013807 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
ERCC1-201ENST00000013807 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
ERCC1-201ENST00000013807 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
ERCC1-201ENST00000013807 MT1MQ8N339 61 aa5.66□□□□□ -1.5
ERCC1-201ENST00000013807 MT1LQ93083 61 aa5.64□□□□□ -1.51
ERCC1-201ENST00000013807 V9GYY9 64 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms