RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 3110021N24RikJ3QMN2 152 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Pglyrp4Q0VB07 374 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 H1fxQ80ZM5 188 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Dennd4aE9Q8V6 1869 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Foxl2O88470 375 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv1-62-3P01754 117 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Spata46Q4FZF2 204 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 CadB2RQC6 2225 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tmem200bD3Z0P8 284 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Klk1b4P00757 256 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Arfgef3Q3UGY8 2170 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Fhl4Q8CDC8 279 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Atp6v0bQ91V37 205 aa12.87□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 PtprdQ64487 1912 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Eid2bE9Q2Y0 151 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv3-6P18531 116 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Nit2Q9JHW2 276 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tcrg-C1A0A075B5Z0 172 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv8-2A0A0A6YW58 119 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P03980 138 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Anapc1P53995 1944 aaKnown RBP12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Plxna2P70207 1894 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01792 123 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 9130213A22RikQ3V3T2 120 aa12.86□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv14-1A0A075B5R4 117 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv5-8A0A075B676 92 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv4-53A0A0G2JFC6 119 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv1-69A0A0G2JFS5 117 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv1-99F6XWB2 120 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ighv1-80A0A075B5Y3 117 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv19-93A0A0G2JFZ3 115 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm10881P01642 115 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Cela2aP05208 271 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm2174F6ZVF2 133 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Znf740Q6NZQ6 180 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Il19Q8CJ70 176 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Ube2e2Q91W82 201 aa12.85□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 KprpB2RUR4 657 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01789 122 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Mbd6Q3TY92 1003 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 C730034F03RikQ8BGL5 111 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gemin7Q9CWY4 129 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Klk4Q9Z0M1 255 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Plxnb3Q9QY40 1902 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01649 108 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 P01812 117 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tcl1b2P56841 117 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv4-57-1A0A075B5M4 119 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igkv20-101-2A0A0G2JDU3 113 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Wt1P22561 449 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Tmem86bQ497J1 226 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Gm12169F2Z474 250 aa12.84□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Igll1P20764 209 aa12.83□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 PmvkQ9D1G2 192 aa12.83□□□□□ -0.35
Pcdh1-203ENSMUST00000160721 Rpl35aO55142 110 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ifi27l2aQ8R412 90 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm9970F6ZED4 185 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm20517G3UVU6 152 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 P01802 115 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Igkv5-37A0A140T8N4 115 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Inafm1E9PV59 130 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Fam110dQ80X91 271 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Tctex1d4Q8CDY7 219 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Col4a6B1AVK5 1691 aa12.83□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Lamtor3O88653 124 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Id3P41133 119 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ndufa3Q9CQ91 84 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Pygo1Q9D0P5 417 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Rnf166Q3U9F6 237 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm7489Q3UT34 171 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Vwc2lQ505H4 222 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Wipf2Q6PEV3 440 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Mogat1Q91ZV4 335 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ighv1-9A0A0A6YW37 117 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Shisal2aA2A9G7 189 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm6034E9Q101 117 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm19684G3UZ45 117 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Lyzl4Q9D925 145 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Trip12G5E870 2025 aaKnown RBP12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ube2wQ8VDW4 151 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Fam216aQ9DB54 251 aa12.82□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Pet100P0DJE0 76 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Cmc4Q61908 68 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Igkv4-68A0A0B4J1I7 117 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Atp6v0e1Q9CQD8 81 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 PkigO70139 76 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Rnf183Q8QZS5 190 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Trav6d-7A0A075B6B0 112 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Pde6hP61249 83 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ndufc2Q9CQ54 120 aa12.81□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Dopey2Q3UHQ6 2295 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm16381A0A1Y7VKT9 73 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Gm2564F6Z9S8 108 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ccl19O70460 108 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ypel3P61237 119 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 CrygbP04344 175 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 OtosQ8R448 89 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Cxcl14Q9WUQ5 99 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Ighv1-58A0A075B5W9 117 aa12.8□□□□□ -0.36
Pcdh1-203ENSMUST00000160721 Igkv8-24A0A140T8P5 121 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms