RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Ly6c1P0CW02 131 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Ifitm1Q9D103 106 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 CrygbP04344 175 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Lhfpl1Q80SV1 220 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Nup214Q80U93 2085 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Abca7Q91V24 2159 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Edn3P48299 214 aa9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Q80X32 188 aaKnown RBP9.95□□□□□ -0.82
Ssh1-202ENSMUST00000112298 P01786 117 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Rasl10aQ8K5A4 203 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Them7Q9DCP4 223 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 B1ARW8 110 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv5-37A0A140T8N4 115 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Tmem14cQ9CQN6 114 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Trav14-3A0A075B607 120 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv4-59A0A0B4J1I8 117 aa9.94□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Fam240bJ3QMB3 78 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Fam110aQ8R184 296 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Reg3dQ9QUS9 175 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv4-61A0A0G2JH00 117 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Erdr1J3QMM0 206 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 CtsbP10605 339 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 A930003A15RikQ3U552 87 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Crlf1Q9JM58 425 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Sbf1Q6ZPE2 1867 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 P01792 123 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Dad1P61804 113 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 AmelxP63277 210 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Tomm6Q9CQN3 74 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Morn5Q9DAI9 170 aa9.93□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Ighv1-19A0A0A6YWX0 117 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Gm20499D3Z4G5 72 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Prr3Q811B5 190 aaKnown RBP9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 A530064D06RikQ8BNV8 229 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Tmem52Q9D702 196 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 SelenokQ9JLJ1 94 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Gm20481G3UXK4 153 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 P01738 130 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 GhrhP16043 103 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Defb26Q30KN7 186 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Sdhaf1Q3U276 118 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Rnf144bQ8BKD6 301 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Msrb3Q8BU85 253 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv12-89A0A0G2JGW8 112 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv6-15A0A140T8M5 115 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Foxl2O88470 375 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Gm815Q3UWS2 115 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Ndufa3Q9CQ91 84 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Tanc1Q0VGY8 1856 aa9.92□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Lrrk1Q3UHC2 2014 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Sslp1Q3UN54 99 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Mcm3apQ9WUU9 1971 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Znf740Q6NZQ6 180 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Pom121l2Q5SW25 972 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Gatd1Q8BFQ8 220 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Col4a5Q63ZW6 1691 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Thsd7bQ6P4U0 1607 aa9.91□□□□□ -0.82
Ssh1-202ENSMUST00000112298 E130218I03RikA0A0U1RNU5 63 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Gm15080A2BI02 449 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Znrd1Q791N7 123 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Fam216bQ8CC14 138 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv4-54A0A0G2JES9 117 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Heatr1G3X9B1 2143 aaKnown RBP9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 ApomQ9Z1R3 190 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Igkv8-34A0A0G2JDU0 121 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Cd33Q63994 403 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Dand5Q76LW6 185 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Q8C708 225 aa9.9□□□□□ -0.82
Ssh1-202ENSMUST00000112298 Ighv5-8A0A075B676 92 aa9.9□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Cox17P56394 63 aa9.9□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Atp6v0bQ91V37 205 aa9.9□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Plxna3P70208 1872 aa9.9□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Cox11Q6P8I6 275 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Synj2bpQ9D6K5 145 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Bcorl1A2AQH4 1781 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Igkv4-72A0A0B4J1I4 117 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 C730034F03RikQ8BGL5 111 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Fhl4Q8CDC8 279 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Gm12253Q5NC48 229 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Slc25a48Q8BW66 306 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 4930447F04RikA2AFR2 126 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 PkigO70139 76 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Cela2aP05208 271 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 P06330 118 aa9.89□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Igkv8-16A0A0G2JDG9 121 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Igkv4-81A0A0G2JEY5 119 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Ccl25O35903 144 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Ighv3-6P18531 116 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Olfr312Q7TRZ9 308 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Ighv1-64A0A075B5X3 117 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Trav14d-1A0A075B6B1 121 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Smim10l1A0A087WNQ7 89 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Gm26558Q8BLW8 286 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Pfn2Q9JJV2 140 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Lect2O88803 151 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Trav12-3A0A075B648 115 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 P01789 122 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Tnrc6aQ3UHK8 1896 aaKnown RBP9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 BB014433Q8C5R5 389 aa9.88□□□□□ -0.83
Ssh1-202ENSMUST00000112298 Ints1Q6P4S8 2195 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms