RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 SeboxP70368 190 aa17.27■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ank3G5E8K5 1961 aa17.27■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm16381A0A1Y7VKT9 73 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm9970F6ZED4 185 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm7102J3QQ10 178 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ighv8-4A0A0A6YW26 117 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 P01786 117 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Id3P41133 119 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Tmem30bQ8BHG3 353 aa17.26■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Cacna1hO88427 2365 aa17.25■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Lamtor3O88653 124 aa17.25■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Shisal2aA2A9G7 189 aa17.25■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Lgals4Q8K419 326 aa17.25■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Dad1P61804 113 aa17.25■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Fhl3Q9R059 289 aa17.25■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 MdfiP70331 251 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Smim10l1A0A087WNQ7 89 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 MsmbO08540 113 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Igkv4-68A0A0B4J1I7 117 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Foxl2O88470 375 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Zfp36l1P23950 338 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Pygo2Q80V76 405 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm37988J3QM41 62 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 3110021N24RikJ3QMN2 152 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ighv5-9-1A0A0A6YVS4 126 aa17.24■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Med13Q5SWW4 2171 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm815Q3UWS2 115 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 9130213A22RikQ3V3T2 120 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 VsirQ9D659 308 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Mbd6Q3TY92 1003 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Pkd1l3Q2EG98 2201 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm20517G3UVU6 152 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Atg2aQ6P4T0 1914 aa17.23■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 PtprfA2A8L5 1898 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ahctf1Q8CJF7 2243 aaKnown RBP17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 LoxP28301 411 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Card19Q9D1I2 183 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Loxl1P97873 607 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ighv8-2A0A0A6YW58 119 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ube2v1Q9CZY3 147 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm28269A0A087WSG3 125 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 P01789 122 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Ighv3-6P18531 116 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 P01738 130 aa17.22■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm20379A0A087WR34 119 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Rspo1Q9Z132 265 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm19410A0A140LJC7 2098 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Gm10188Q3V432 135 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 SpinklQ8CEK3 90 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 AcacaQ5SWU9 2345 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Edn1P22387 202 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 PtprdQ64487 1912 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Fam216bQ8CC14 138 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Atp6v0bQ91V37 205 aa17.21■□□□□ 0.35
Smarcc1-201ENSMUST00000088716 Synj2bpQ9D6K5 145 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Vwc2lQ505H4 222 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Cd99Q8VCN6 175 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Gemin7Q9CWY4 129 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Lyg1Q9D7Q0 197 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Fam110aQ8R184 296 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Ang5Q5GAN1 145 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 RlfA2A7F4 1918 aa17.2■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 H2al1jA2BFR3 109 aa17.19■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Med12lQ8BQM9 2157 aa17.19■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Wfdc9Q3UW41 83 aa17.19■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Igkv4-53A0A0G2JFC6 119 aa17.18■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Obsl1D3YYU8 1804 aaKnown RBP17.18■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Igkv8-34A0A0G2JDU0 121 aa17.18■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 March3Q8BRX9 218 aa17.18■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Fam216aQ9DB54 251 aa17.18■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 A0A286YE02 88 aa17.17■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 LeprotO89013 131 aa17.17■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 F930015N05RikQ8C3A3 210 aa17.17■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Asxl3Q8C4A5 2259 aa17.17■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Plxna4Q80UG2 1893 aa17.17■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Wipf2Q6PEV3 440 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Ighv1-19A0A0A6YWX0 117 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Reg3gO09049 174 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Ndufa4Q62425 82 aaKnown RBP17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Chchd5Q9CQP3 110 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Akap6E9Q9K8 2307 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Tmem210Q9D2F0 147 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Phf3B2RQG2 2025 aaKnown RBP17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Insl3O09107 122 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Gm9961Q8BNV2 113 aa17.16■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Dennd4aE9Q8V6 1869 aa17.15■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Reg3dQ9QUS9 175 aa17.15■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Ndufc2Q9CQ54 120 aa17.15■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 Trav14n-2A0A0G2JDF5 121 aa17.14■□□□□ 0.34
Smarcc1-201ENSMUST00000088716 E130218I03RikA0A0U1RNU5 63 aa17.14■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 P06330 118 aa17.14■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Igkv4-61A0A0G2JH00 117 aa17.14■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Sdhaf1Q3U276 118 aa17.14■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Ighv1-74A0A0G2JGK2 117 aa17.13■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Igkv4-59A0A0B4J1I8 117 aa17.13■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Smim26Q3V460 107 aa17.13■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Zc2hc1aQ8BJH1 324 aa17.13■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Ighv1-4A0A075B5T4 117 aa17.12■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Lhfpl1Q80SV1 220 aa17.12■□□□□ 0.33
Smarcc1-201ENSMUST00000088716 Tmem263Q9DAM7 115 aa17.12■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms