RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Rp1P56716 2095 aa13.88□□□□□ -0.19
Usp48-201ENSMUST00000055131 Lamtor3O88653 124 aa13.88□□□□□ -0.19
Usp48-201ENSMUST00000055131 9130213A22RikQ3V3T2 120 aa13.88□□□□□ -0.19
Usp48-201ENSMUST00000055131 RhohQ9D3G9 191 aa13.88□□□□□ -0.19
Usp48-201ENSMUST00000055131 Plxna3P70208 1872 aa13.88□□□□□ -0.19
Usp48-201ENSMUST00000055131 Plxnd1Q3UH93 1925 aa13.88□□□□□ -0.19
Usp48-201ENSMUST00000055131 Edn3P48299 214 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ntf4Q80VU4 209 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 TdhQ8K3F7 373 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Med13Q5SWW4 2171 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Id3P41133 119 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 VsirQ9D659 308 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Dpm3Q9D1Q4 92 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Igkv6-15A0A140T8M5 115 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Tpsab1Q02844 273 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Tpsg1Q9QUL7 311 aa13.87□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ighv1-39A0A075B5V5 117 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Gm33815A0A087WNV3 176 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Igkv4-53A0A0G2JFC6 119 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ptprz1B9EKR1 2312 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ighv8-2A0A0A6YW58 119 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 MpdzQ8VBX6 2055 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ighv1-16A0A075B5U1 98 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Armcx4E9PWM3 2356 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Tex26Q0VB26 296 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Minos1Q7TNS2 76 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Fam216aQ9DB54 251 aa13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Sptan1P16546 2472 aaKnown RBP13.86□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ly86O88188 162 aa13.85□□□□□ -0.19
Usp48-201ENSMUST00000055131 Znf740Q6NZQ6 180 aa13.85□□□□□ -0.19
Usp48-201ENSMUST00000055131 Gm26558Q8BLW8 286 aa13.85□□□□□ -0.19
Usp48-201ENSMUST00000055131 Cd33Q63994 403 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 Gm9747Q810H1 104 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 Sp5Q9JHX2 398 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 Rspo1Q9Z132 265 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 RlfA2A7F4 1918 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 ApomQ9Z1R3 190 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 PtprfA2A8L5 1898 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 Med12lQ8BQM9 2157 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 Gm7257D3YX25 99 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 A730015C16RikQ8C992 119 aa13.84□□□□□ -0.19
Usp48-201ENSMUST00000055131 Gm16381A0A1Y7VKT9 73 aa13.83□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ang5Q5GAN1 145 aa13.83□□□□□ -0.19
Usp48-201ENSMUST00000055131 Gemin7Q9CWY4 129 aa13.83□□□□□ -0.19
Usp48-201ENSMUST00000055131 Ccl21aP84444 133 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 Ccl21bP86792 133 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 Ccl21cP86793 133 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 Vwc2lQ505H4 222 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 Gm28778A0A087WSK7 233 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 LitafQ9JLJ0 161 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 E130218I03RikA0A0U1RNU5 63 aa13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 Taf15Q8BQ46 557 aaKnown RBP13.83□□□□□ -0.2
Usp48-201ENSMUST00000055131 Fam208bQ5DTT3 2382 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 3110021N24RikJ3QMN2 152 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 Fam110dQ80X91 271 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 P01793 123 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 Cfap46E9Q2C0 2641 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 CrygbP04344 175 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 Gm10188Q3V432 135 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 Pear1Q8VIK5 1034 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 Pfn2Q9JJV2 140 aa13.82□□□□□ -0.2
Usp48-201ENSMUST00000055131 Gm815Q3UWS2 115 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Wipf2Q6PEV3 440 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Pcp4P63054 62 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Pom121l2Q5SW25 972 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Chchd5Q9CQP3 110 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Dock4P59764 1978 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Ighv1-58A0A075B5W9 117 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Gm19410A0A140LJC7 2098 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Igll1P20764 209 aa13.81□□□□□ -0.2
Usp48-201ENSMUST00000055131 Smim10l1A0A087WNQ7 89 aa13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 Gm20379A0A087WR34 119 aa13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 Shisa9Q9CZN4 424 aa13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 Igkv3-9A0A140T8P4 119 aa13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 Phf3B2RQG2 2025 aaKnown RBP13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 Igkv4-61A0A0G2JH00 117 aa13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 P01786 117 aa13.8□□□□□ -0.2
Usp48-201ENSMUST00000055131 Igkv4-59A0A0B4J1I8 117 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Cd24P24807 76 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Gtsf1Q9DAN6 167 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 PoleQ9WVF7 2283 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Synj2bpQ9D6K5 145 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Pcnx1Q9QYC1 2344 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Trav14n-2A0A0G2JDF5 121 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Sdhaf1Q3U276 118 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Adamts9E9PUN6 1931 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Trav3-4A0A075B654 114 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 A0A286YE02 88 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 Foxf1Q61080 378 aa13.79□□□□□ -0.2
Usp48-201ENSMUST00000055131 P01738 130 aa13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 Ighv5-8A0A075B676 92 aa13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 H2al1jA2BFR3 109 aa13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 LeprotO89013 131 aa13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 Mtatp8P03930 67 aa13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 Ndufc2Q9CQ54 120 aa13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 CenpeQ6RT24 2474 aaKnown RBP13.78□□□□□ -0.2
Usp48-201ENSMUST00000055131 Asxl3Q8C4A5 2259 aa13.77□□□□□ -0.2
Usp48-201ENSMUST00000055131 Loxl1P97873 607 aa13.77□□□□□ -0.2
Usp48-201ENSMUST00000055131 Reg3dQ9QUS9 175 aa13.77□□□□□ -0.2
Usp48-201ENSMUST00000055131 Tmem30bQ8BHG3 353 aa13.77□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 56.6 ms