RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
SPIN3-238ENST00000640421 Q8N9L7 120 aa9.89□□□□□ -0.83
SPIN3-238ENST00000640421 HMCN2Q8NDA2 5059 aa9.89□□□□□ -0.83
SPIN3-238ENST00000640421 LPAP08519 4548 aa9.88□□□□□ -0.83
SPIN3-238ENST00000640421 A8MWP4 228 aa9.86□□□□□ -0.83
SPIN3-238ENST00000640421 K7EQZ3 153 aa9.86□□□□□ -0.83
SPIN3-238ENST00000640421 CXCL6P80162 114 aa9.86□□□□□ -0.83
SPIN3-238ENST00000640421 PRR4Q16378 134 aa9.86□□□□□ -0.83
SPIN3-238ENST00000640421 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
SPIN3-238ENST00000640421 IGLV7-46A0A075B6I9 117 aa9.83□□□□□ -0.84
SPIN3-238ENST00000640421 ATP5EP2Q5VTU8 51 aa9.83□□□□□ -0.84
SPIN3-238ENST00000640421 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
SPIN3-238ENST00000640421 IGHV6-1A0A0B4J1U7 121 aa9.82□□□□□ -0.84
SPIN3-238ENST00000640421 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
SPIN3-238ENST00000640421 PRR15Q8IV56 129 aa9.82□□□□□ -0.84
SPIN3-238ENST00000640421 NDUFB1O75438 58 aa9.79□□□□□ -0.84
SPIN3-238ENST00000640421 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
SPIN3-238ENST00000640421 LRP2P98164 4655 aa9.77□□□□□ -0.85
SPIN3-238ENST00000640421 KRTAP13-3Q3SY46 172 aa9.76□□□□□ -0.85
SPIN3-238ENST00000640421 MMP24-AS1A0A0U1RRL7 71 aa9.74□□□□□ -0.85
SPIN3-238ENST00000640421 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
SPIN3-238ENST00000640421 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
SPIN3-238ENST00000640421 A0A087WVE0 104 aa9.73□□□□□ -0.85
SPIN3-238ENST00000640421 LINC00313P59037 77 aa9.72□□□□□ -0.85
SPIN3-238ENST00000640421 TPRXLQ17RH7 258 aa9.71□□□□□ -0.85
SPIN3-238ENST00000640421 KRTAP16-1A8MUX0 517 aa9.7□□□□□ -0.86
SPIN3-238ENST00000640421 C8orf87E5RJ46 101 aa9.7□□□□□ -0.86
SPIN3-238ENST00000640421 ANAPC13Q9BS18 74 aa9.7□□□□□ -0.86
SPIN3-238ENST00000640421 IMUPQ9GZP8 106 aa9.68□□□□□ -0.86
SPIN3-238ENST00000640421 WFDC13Q8IUB5 93 aa9.68□□□□□ -0.86
SPIN3-238ENST00000640421 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
SPIN3-238ENST00000640421 hDV103S1A0JD37 113 aa9.65□□□□□ -0.86
SPIN3-238ENST00000640421 XP32Q5T750 250 aa9.65□□□□□ -0.86
SPIN3-238ENST00000640421 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
SPIN3-238ENST00000640421 TMEM254Q8TBM7 123 aa9.61□□□□□ -0.87
SPIN3-238ENST00000640421 FAM236AA0A1B0GUQ0 79 aa9.59□□□□□ -0.87
SPIN3-238ENST00000640421 FAM236BA0A1B0GV22 79 aa9.59□□□□□ -0.87
SPIN3-238ENST00000640421 MRPL34Q9BQ48 92 aaKnown RBP9.59□□□□□ -0.87
SPIN3-238ENST00000640421 C20orf166-AS1Q96NR2 134 aa9.58□□□□□ -0.88
SPIN3-238ENST00000640421 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
SPIN3-238ENST00000640421 A8MUU9 505 aa9.56□□□□□ -0.88
SPIN3-238ENST00000640421 CCDC179H3BU77 68 aa9.55□□□□□ -0.88
SPIN3-238ENST00000640421 UBR4Q5T4S7 5183 aa9.54□□□□□ -0.88
SPIN3-238ENST00000640421 Q75L30 129 aa9.53□□□□□ -0.88
SPIN3-238ENST00000640421 RPL37P61927 97 aaKnown RBP9.52□□□□□ -0.89
SPIN3-238ENST00000640421 NDUFS5O43920 106 aa9.51□□□□□ -0.89
SPIN3-238ENST00000640421 MUC17Q685J3 4493 aa9.5□□□□□ -0.89
SPIN3-238ENST00000640421 ATOX1O00244 68 aa9.43□□□□□ -0.9
SPIN3-238ENST00000640421 OCR1Q9BZK8 76 aa9.43□□□□□ -0.9
SPIN3-238ENST00000640421 Q5W150 140 aa9.42□□□□□ -0.9
SPIN3-238ENST00000640421 MUC2Q02817 5179 aa9.41□□□□□ -0.9
SPIN3-238ENST00000640421 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
SPIN3-238ENST00000640421 ZCCHC13Q8WW36 166 aaKnown RBP9.4□□□□□ -0.9
SPIN3-238ENST00000640421 UQCRQO14949 82 aa9.39□□□□□ -0.91
SPIN3-238ENST00000640421 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
SPIN3-238ENST00000640421 TP53AIP1Q9HCN2 124 aa9.38□□□□□ -0.91
SPIN3-238ENST00000640421 COX7CP15954 63 aa9.38□□□□□ -0.91
SPIN3-238ENST00000640421 RNF213Q63HN8 5207 aa9.38□□□□□ -0.91
SPIN3-238ENST00000640421 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
SPIN3-238ENST00000640421 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
SPIN3-238ENST00000640421 TRAV22A0A0B4J277 110 aa9.31□□□□□ -0.92
SPIN3-238ENST00000640421 TRAV7A0A075B6U4 112 aa9.3□□□□□ -0.92
SPIN3-238ENST00000640421 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
SPIN3-238ENST00000640421 SMIM20Q8N5G0 67 aa9.28□□□□□ -0.92
SPIN3-238ENST00000640421 H0Y9P7 68 aa9.28□□□□□ -0.92
SPIN3-238ENST00000640421 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
SPIN3-238ENST00000640421 C5orf47Q569G3 176 aa9.23□□□□□ -0.93
SPIN3-238ENST00000640421 IGKV2D-30A0A075B6S6 120 aa9.21□□□□□ -0.93
SPIN3-238ENST00000640421 IGKV2-30P06310 120 aa9.21□□□□□ -0.93
SPIN3-238ENST00000640421 SPINK7P58062 85 aa9.21□□□□□ -0.93
SPIN3-238ENST00000640421 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
SPIN3-238ENST00000640421 MP68P56378 58 aa9.19□□□□□ -0.94
SPIN3-238ENST00000640421 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
SPIN3-238ENST00000640421 C7orf65Q6ZTY9 151 aa9.17□□□□□ -0.94
SPIN3-238ENST00000640421 LOC101927531A0A1B0GV80 90 aa9.15□□□□□ -0.95
SPIN3-238ENST00000640421 CYP4F30PQ9H0H9 118 aa9.15□□□□□ -0.95
SPIN3-238ENST00000640421 A0A0U1RQV1 116 aa9.13□□□□□ -0.95
SPIN3-238ENST00000640421 C20orf197Q8N268 126 aa9.13□□□□□ -0.95
SPIN3-238ENST00000640421 H3BPC8 53 aa9.12□□□□□ -0.95
SPIN3-238ENST00000640421 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
SPIN3-238ENST00000640421 HRES1P13985 223 aa9.11□□□□□ -0.95
SPIN3-238ENST00000640421 TMEM258P61165 79 aa9.1□□□□□ -0.95
SPIN3-238ENST00000640421 KLKP1Q107X0 134 aa9.08□□□□□ -0.96
SPIN3-238ENST00000640421 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
SPIN3-238ENST00000640421 H7BZZ5 65 aa9.02□□□□□ -0.97
SPIN3-238ENST00000640421 FAT4Q6V0I7 4981 aa9.01□□□□□ -0.97
SPIN3-238ENST00000640421 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
SPIN3-238ENST00000640421 KRTAP19-2Q3LHN2 52 aa9□□□□□ -0.97
SPIN3-238ENST00000640421 RPS28P62857 69 aaKnown RBP8.97□□□□□ -0.97
SPIN3-238ENST00000640421 FAM236DA0A1B0GTK5 79 aa8.94□□□□□ -0.98
SPIN3-238ENST00000640421 FAM236CP0DP71 79 aa8.94□□□□□ -0.98
SPIN3-238ENST00000640421 FLGP20930 4061 aaPredicted RBP8.93□□□□□ -0.98
SPIN3-238ENST00000640421 NDUFC1O43677 76 aa8.93□□□□□ -0.98
SPIN3-238ENST00000640421 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
SPIN3-238ENST00000640421 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
SPIN3-238ENST00000640421 COX6B2Q6YFQ2 88 aa8.91□□□□□ -0.98
SPIN3-238ENST00000640421 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
SPIN3-238ENST00000640421 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
SPIN3-238ENST00000640421 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
SPIN3-238ENST00000640421 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms