RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
HLA-C-210ENST00000640219 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
HLA-C-210ENST00000640219 FAM236CP0DP71 79 aa8□□□□□ -1.13
HLA-C-210ENST00000640219 KLKP1Q107X0 134 aa8□□□□□ -1.13
HLA-C-210ENST00000640219 CYSTM1Q9H1C7 97 aa7.99□□□□□ -1.13
HLA-C-210ENST00000640219 ATP5EP56381 51 aaPredicted RBP7.97□□□□□ -1.13
HLA-C-210ENST00000640219 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
HLA-C-210ENST00000640219 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
HLA-C-210ENST00000640219 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.14
HLA-C-210ENST00000640219 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
HLA-C-210ENST00000640219 IGLV8-61A0A075B6I0 122 aa7.95□□□□□ -1.14
HLA-C-210ENST00000640219 SMIM29Q86T20 159 aa7.95□□□□□ -1.14
HLA-C-210ENST00000640219 Q8N9L7 120 aa7.95□□□□□ -1.14
HLA-C-210ENST00000640219 SVIPQ8NHG7 77 aa7.94□□□□□ -1.14
HLA-C-210ENST00000640219 SNURFQ9Y675 71 aa7.94□□□□□ -1.14
HLA-C-210ENST00000640219 SERP1Q9Y6X1 66 aa7.94□□□□□ -1.14
HLA-C-210ENST00000640219 H7BZZ5 65 aa7.93□□□□□ -1.14
HLA-C-210ENST00000640219 TYMSOSQ8TAI1 123 aa7.93□□□□□ -1.14
HLA-C-210ENST00000640219 TMEM254Q8TBM7 123 aa7.93□□□□□ -1.14
HLA-C-210ENST00000640219 IGLV7-46A0A075B6I9 117 aa7.92□□□□□ -1.14
HLA-C-210ENST00000640219 IGFL1Q6UW32 110 aa7.92□□□□□ -1.14
HLA-C-210ENST00000640219 SPRR1BP22528 89 aa7.91□□□□□ -1.14
HLA-C-210ENST00000640219 OCR1Q9BZK8 76 aa7.91□□□□□ -1.14
HLA-C-210ENST00000640219 DSCR10P59022 87 aa7.87□□□□□ -1.15
HLA-C-210ENST00000640219 HCG22E2RYF7 251 aa7.86□□□□□ -1.15
HLA-C-210ENST00000640219 A0A087WSZ3 146 aa7.85□□□□□ -1.15
HLA-C-210ENST00000640219 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
HLA-C-210ENST00000640219 C5orf47Q569G3 176 aa7.85□□□□□ -1.15
HLA-C-210ENST00000640219 K7EQZ3 153 aa7.83□□□□□ -1.16
HLA-C-210ENST00000640219 FAM229BQ4G0N7 80 aa7.83□□□□□ -1.16
HLA-C-210ENST00000640219 KRTAP4-1Q9BYQ7 146 aa7.83□□□□□ -1.16
HLA-C-210ENST00000640219 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
HLA-C-210ENST00000640219 ASB16-AS1Q495Z4 193 aa7.82□□□□□ -1.16
HLA-C-210ENST00000640219 LINC00304Q8N9R0 145 aa7.82□□□□□ -1.16
HLA-C-210ENST00000640219 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
HLA-C-210ENST00000640219 MP68P56378 58 aa7.79□□□□□ -1.16
HLA-C-210ENST00000640219 A0A0G2JQZ4 141 aa7.78□□□□□ -1.16
HLA-C-210ENST00000640219 NDUFB1O75438 58 aa7.78□□□□□ -1.16
HLA-C-210ENST00000640219 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
HLA-C-210ENST00000640219 A8MWP4 228 aa7.76□□□□□ -1.17
HLA-C-210ENST00000640219 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
HLA-C-210ENST00000640219 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
HLA-C-210ENST00000640219 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
HLA-C-210ENST00000640219 CASC2Q6XLA1 102 aa7.75□□□□□ -1.17
HLA-C-210ENST00000640219 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
HLA-C-210ENST00000640219 PRR15Q8IV56 129 aa7.75□□□□□ -1.17
HLA-C-210ENST00000640219 H3BPC8 53 aa7.74□□□□□ -1.17
HLA-C-210ENST00000640219 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
HLA-C-210ENST00000640219 MOBPQ13875 183 aa7.74□□□□□ -1.17
HLA-C-210ENST00000640219 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
HLA-C-210ENST00000640219 LINC00472Q9H8W2 130 aa7.73□□□□□ -1.17
HLA-C-210ENST00000640219 KRTAP13-3Q3SY46 172 aa7.71□□□□□ -1.18
HLA-C-210ENST00000640219 Q5XG85 94 aa7.71□□□□□ -1.18
HLA-C-210ENST00000640219 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.18
HLA-C-210ENST00000640219 MT1HP80294 61 aa7.7□□□□□ -1.18
HLA-C-210ENST00000640219 FP248Q71RG6 208 aaPredicted RBP7.7□□□□□ -1.18
HLA-C-210ENST00000640219 C4orf26Q17RF5 130 aa7.69□□□□□ -1.18
HLA-C-210ENST00000640219 hDV103S1A0JD37 113 aa7.68□□□□□ -1.18
HLA-C-210ENST00000640219 LORP23490 312 aaPredicted RBP7.67□□□□□ -1.18
HLA-C-210ENST00000640219 H0Y9P7 68 aa7.66□□□□□ -1.18
HLA-C-210ENST00000640219 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
HLA-C-210ENST00000640219 KRTAP10-6P60371 365 aaPredicted RBP7.65□□□□□ -1.18
HLA-C-210ENST00000640219 C4orf48Q5BLP8 95 aa7.65□□□□□ -1.18
HLA-C-210ENST00000640219 KRTAP19-2Q3LHN2 52 aa7.64□□□□□ -1.19
HLA-C-210ENST00000640219 LINC00208Q96KT6 92 aa7.64□□□□□ -1.19
HLA-C-210ENST00000640219 TP53AIP1Q9HCN2 124 aa7.64□□□□□ -1.19
HLA-C-210ENST00000640219 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
HLA-C-210ENST00000640219 CYP4F30PQ9H0H9 118 aa7.63□□□□□ -1.19
HLA-C-210ENST00000640219 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
HLA-C-210ENST00000640219 MMP24-AS1A0A0U1RRL7 71 aa7.61□□□□□ -1.19
HLA-C-210ENST00000640219 SSBP3-AS1Q7Z2R9 100 aa7.59□□□□□ -1.19
HLA-C-210ENST00000640219 SPANXA2-OT1Q8N9U9 137 aa7.59□□□□□ -1.19
HLA-C-210ENST00000640219 C1orf64Q8NEQ6 169 aa7.59□□□□□ -1.19
HLA-C-210ENST00000640219 C8orf17Q9NRJ1 99 aa7.59□□□□□ -1.19
HLA-C-210ENST00000640219 SPINK1P00995 79 aa7.58□□□□□ -1.2
HLA-C-210ENST00000640219 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
HLA-C-210ENST00000640219 Q96NJ1 140 aa7.57□□□□□ -1.2
HLA-C-210ENST00000640219 CD164Q04900 197 aa7.56□□□□□ -1.2
HLA-C-210ENST00000640219 MPLKIPQ8TAP9 179 aa7.55□□□□□ -1.2
HLA-C-210ENST00000640219 V9GYY9 64 aa7.55□□□□□ -1.2
HLA-C-210ENST00000640219 IGHV6-1A0A0B4J1U7 121 aa7.54□□□□□ -1.2
HLA-C-210ENST00000640219 M0R2T5 61 aa7.54□□□□□ -1.2
HLA-C-210ENST00000640219 XP32Q5T750 250 aa7.54□□□□□ -1.2
HLA-C-210ENST00000640219 NDUFS5O43920 106 aa7.53□□□□□ -1.2
HLA-C-210ENST00000640219 MRPL34Q9BQ48 92 aaKnown RBP7.52□□□□□ -1.21
HLA-C-210ENST00000640219 Q1T7F1 81 aa7.51□□□□□ -1.21
HLA-C-210ENST00000640219 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
HLA-C-210ENST00000640219 C8orf87E5RJ46 101 aa7.48□□□□□ -1.21
HLA-C-210ENST00000640219 PRO0628Q9UI54 55 aa7.48□□□□□ -1.21
HLA-C-210ENST00000640219 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
HLA-C-210ENST00000640219 PCOTHQ58A44 107 aa7.44□□□□□ -1.22
HLA-C-210ENST00000640219 C1orf195Q5TG92 126 aa7.43□□□□□ -1.22
HLA-C-210ENST00000640219 BRK1Q8WUW1 75 aa7.42□□□□□ -1.22
HLA-C-210ENST00000640219 LIMD2Q9BT23 127 aa7.42□□□□□ -1.22
HLA-C-210ENST00000640219 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
HLA-C-210ENST00000640219 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
HLA-C-210ENST00000640219 LINC00313P59037 77 aa7.37□□□□□ -1.23
HLA-C-210ENST00000640219 COX6B2Q6YFQ2 88 aa7.37□□□□□ -1.23
HLA-C-210ENST00000640219 COA5Q86WW8 74 aa7.37□□□□□ -1.23
HLA-C-210ENST00000640219 USH2AO75445 5202 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms