RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 LINC00208Q96KT6 92 aa4.88□□□□□ -1.63
GPC3-204ENST00000631057 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
GPC3-204ENST00000631057 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
GPC3-204ENST00000631057 DNAH6Q9C0G6 4158 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 ZNF861PO60384 105 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 CDK2AP2O75956 126 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 MOBPQ13875 183 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 C1orf134Q5TEV5 83 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 C1orf64Q8NEQ6 169 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 Q96NJ1 140 aa4.87□□□□□ -1.63
GPC3-204ENST00000631057 SPANXA2-OT1Q8N9U9 137 aa4.86□□□□□ -1.63
GPC3-204ENST00000631057 DNAH2Q9P225 4427 aa4.85□□□□□ -1.63
GPC3-204ENST00000631057 MPLKIPQ8TAP9 179 aa4.85□□□□□ -1.63
GPC3-204ENST00000631057 ASB16-AS1Q495Z4 193 aa4.84□□□□□ -1.63
GPC3-204ENST00000631057 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
GPC3-204ENST00000631057 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
GPC3-204ENST00000631057 DNAH8Q96JB1 4490 aa4.84□□□□□ -1.63
GPC3-204ENST00000631057 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
GPC3-204ENST00000631057 A0A1B0GVX0 72 aa4.82□□□□□ -1.64
GPC3-204ENST00000631057 PRR4Q16378 134 aa4.82□□□□□ -1.64
GPC3-204ENST00000631057 LINC00336Q6ZUF6 198 aa4.82□□□□□ -1.64
GPC3-204ENST00000631057 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
GPC3-204ENST00000631057 IGLV7-43P04211 117 aa4.82□□□□□ -1.64
GPC3-204ENST00000631057 Q1T7F1 81 aa4.82□□□□□ -1.64
GPC3-204ENST00000631057 KMT2AQ03164 3969 aa4.8□□□□□ -1.64
GPC3-204ENST00000631057 IGHV6-1A0A0B4J1U7 121 aa4.8□□□□□ -1.64
GPC3-204ENST00000631057 ANAPC11Q9NYG5 84 aa4.8□□□□□ -1.64
GPC3-204ENST00000631057 TGP01266 2768 aa4.8□□□□□ -1.64
GPC3-204ENST00000631057 CD164Q04900 197 aa4.79□□□□□ -1.64
GPC3-204ENST00000631057 LY6G6CO95867 125 aa4.78□□□□□ -1.64
GPC3-204ENST00000631057 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
GPC3-204ENST00000631057 V9GYY9 64 aa4.78□□□□□ -1.64
GPC3-204ENST00000631057 NDUFS5O43920 106 aa4.78□□□□□ -1.64
GPC3-204ENST00000631057 IGLV7-46A0A075B6I9 117 aa4.77□□□□□ -1.65
GPC3-204ENST00000631057 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
GPC3-204ENST00000631057 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
GPC3-204ENST00000631057 FRAS1Q86XX4 4008 aa4.76□□□□□ -1.65
GPC3-204ENST00000631057 ALMS1Q8TCU4 4167 aa4.76□□□□□ -1.65
GPC3-204ENST00000631057 CIRBP-AS1Q8TBR5 109 aa4.75□□□□□ -1.65
GPC3-204ENST00000631057 DNAH11Q96DT5 4516 aa4.74□□□□□ -1.65
GPC3-204ENST00000631057 C8orf87E5RJ46 101 aa4.74□□□□□ -1.65
GPC3-204ENST00000631057 PCOTHQ58A44 107 aa4.74□□□□□ -1.65
GPC3-204ENST00000631057 C1orf195Q5TG92 126 aa4.74□□□□□ -1.65
GPC3-204ENST00000631057 SPINK6Q6UWN8 80 aa4.74□□□□□ -1.65
GPC3-204ENST00000631057 A0A087X002 238 aa4.73□□□□□ -1.65
GPC3-204ENST00000631057 KRTAP10-2P60368 255 aa4.73□□□□□ -1.65
GPC3-204ENST00000631057 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
GPC3-204ENST00000631057 COA5Q86WW8 74 aa4.73□□□□□ -1.65
GPC3-204ENST00000631057 DNAH5Q8TE73 4624 aa4.72□□□□□ -1.65
GPC3-204ENST00000631057 LOC101927531A0A1B0GV80 90 aa4.72□□□□□ -1.65
GPC3-204ENST00000631057 LIMD2Q9BT23 127 aa4.72□□□□□ -1.65
GPC3-204ENST00000631057 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
GPC3-204ENST00000631057 PSPHP1O15172 72 aa4.71□□□□□ -1.66
GPC3-204ENST00000631057 Q6ZSA8 131 aa4.71□□□□□ -1.66
GPC3-204ENST00000631057 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
GPC3-204ENST00000631057 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
GPC3-204ENST00000631057 A8MUN3 132 aa4.7□□□□□ -1.66
GPC3-204ENST00000631057 KRTAP10-1P60331 282 aa4.69□□□□□ -1.66
GPC3-204ENST00000631057 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
GPC3-204ENST00000631057 KRTAP13-3Q3SY46 172 aa4.68□□□□□ -1.66
GPC3-204ENST00000631057 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
GPC3-204ENST00000631057 Q5VV11 94 aa4.67□□□□□ -1.66
GPC3-204ENST00000631057 LINC00313P59037 77 aa4.66□□□□□ -1.66
GPC3-204ENST00000631057 Q5W150 140 aa4.66□□□□□ -1.66
GPC3-204ENST00000631057 PKD1P98161 4303 aa4.66□□□□□ -1.66
GPC3-204ENST00000631057 PRR15LQ9BU68 103 aa4.65□□□□□ -1.66
GPC3-204ENST00000631057 HRES1P13985 223 aa4.65□□□□□ -1.67
GPC3-204ENST00000631057 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
GPC3-204ENST00000631057 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
GPC3-204ENST00000631057 CHKB-CPT1BH3BT56 60 aa4.63□□□□□ -1.67
GPC3-204ENST00000631057 KRTAP1-4P0C5Y4 121 aa4.63□□□□□ -1.67
GPC3-204ENST00000631057 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
GPC3-204ENST00000631057 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
GPC3-204ENST00000631057 ACYP2P14621 99 aa4.61□□□□□ -1.67
GPC3-204ENST00000631057 SPAG11AQ6PDA7 123 aa4.61□□□□□ -1.67
GPC3-204ENST00000631057 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
GPC3-204ENST00000631057 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.67
GPC3-204ENST00000631057 IGKV2-30P06310 120 aa4.59□□□□□ -1.67
GPC3-204ENST00000631057 TYMSOSQ8TAI1 123 aa4.59□□□□□ -1.67
GPC3-204ENST00000631057 SPINK1P00995 79 aa4.58□□□□□ -1.68
GPC3-204ENST00000631057 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
GPC3-204ENST00000631057 SACSQ9NZJ4 4579 aa4.58□□□□□ -1.68
GPC3-204ENST00000631057 A6NED7 52 aa4.57□□□□□ -1.68
GPC3-204ENST00000631057 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
GPC3-204ENST00000631057 RETNLBQ9BQ08 111 aa4.57□□□□□ -1.68
GPC3-204ENST00000631057 KRTAP5-3Q6L8H2 238 aa4.56□□□□□ -1.68
GPC3-204ENST00000631057 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
GPC3-204ENST00000631057 KMT2CQ8NEZ4 4911 aaKnown RBP4.55□□□□□ -1.68
GPC3-204ENST00000631057 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
GPC3-204ENST00000631057 LINC00304Q8N9R0 145 aa4.53□□□□□ -1.68
GPC3-204ENST00000631057 A8MU10 97 aa4.53□□□□□ -1.69
GPC3-204ENST00000631057 LCE4AQ5TA78 99 aa4.53□□□□□ -1.69
GPC3-204ENST00000631057 ATP11AUNQ6ZP68 121 aa4.53□□□□□ -1.69
GPC3-204ENST00000631057 LCA10Q71F78 164 aa4.53□□□□□ -1.69
GPC3-204ENST00000631057 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
GPC3-204ENST00000631057 RYR2Q92736 4967 aa4.52□□□□□ -1.69
GPC3-204ENST00000631057 A0A1B0GVY2 172 aa4.51□□□□□ -1.69
GPC3-204ENST00000631057 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
GPC3-204ENST00000631057 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
GPC3-204ENST00000631057 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms