RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ABCA13Q86UQ4 5058 aa-1.86□□□□□ -2.71
SRP54-214ENST00000630962 GYPAP02724 150 aa-1.86□□□□□ -2.71
SRP54-214ENST00000630962 C14orf144Q96I85 54 aa-1.86□□□□□ -2.71
SRP54-214ENST00000630962 ITSN1Q15811 1721 aa-1.86□□□□□ -2.71
SRP54-214ENST00000630962 URB2Q14146 1524 aaKnown RBP-1.86□□□□□ -2.71
SRP54-214ENST00000630962 RBP2P50120 134 aa-1.87□□□□□ -2.71
SRP54-214ENST00000630962 DNAH10Q8IVF4 4471 aa-1.87□□□□□ -2.71
SRP54-214ENST00000630962 TMEM131LA2VDJ0 1609 aa-1.88□□□□□ -2.71
SRP54-214ENST00000630962 NCMAPQ5T1S8 102 aa-1.88□□□□□ -2.71
SRP54-214ENST00000630962 ACBD7Q8N6N7 88 aa-1.88□□□□□ -2.71
SRP54-214ENST00000630962 TCEAL7Q9BRU2 100 aa-1.88□□□□□ -2.71
SRP54-214ENST00000630962 PLCH1Q4KWH8 1693 aa-1.88□□□□□ -2.71
SRP54-214ENST00000630962 KIAA0586Q9BVV6 1533 aa-1.88□□□□□ -2.71
SRP54-214ENST00000630962 ITSN2Q9NZM3 1697 aa-1.89□□□□□ -2.71
SRP54-214ENST00000630962 ATP6V1G2-DDX39BF2Z307 99 aa-1.89□□□□□ -2.71
SRP54-214ENST00000630962 S100PP25815 95 aa-1.89□□□□□ -2.71
SRP54-214ENST00000630962 RABAC1Q9UI14 185 aa-1.89□□□□□ -2.71
SRP54-214ENST00000630962 LY75O60449 1722 aa-1.89□□□□□ -2.71
SRP54-214ENST00000630962 CEP162Q5TB80 1403 aa-1.9□□□□□ -2.71
SRP54-214ENST00000630962 ITPR2Q14571 2701 aa-1.9□□□□□ -2.71
SRP54-214ENST00000630962 DEFB131BA0A096LNP1 70 aa-1.9□□□□□ -2.71
SRP54-214ENST00000630962 THOC2Q8NI27 1593 aaKnown RBP-1.9□□□□□ -2.71
SRP54-214ENST00000630962 ATMQ13315 3056 aa-1.91□□□□□ -2.71
SRP54-214ENST00000630962 MRPL33O75394 65 aaKnown RBP-1.91□□□□□ -2.72
SRP54-214ENST00000630962 CCDC88BA6NC98 1476 aa-1.91□□□□□ -2.72
SRP54-214ENST00000630962 CDC42BPGQ6DT37 1551 aa-1.91□□□□□ -2.72
SRP54-214ENST00000630962 KIF1AQ12756 1690 aa-1.91□□□□□ -2.72
SRP54-214ENST00000630962 ZC3H13Q5T200 1668 aaKnown RBP-1.92□□□□□ -2.72
SRP54-214ENST00000630962 SNRPFP62306 86 aaKnown RBP-1.92□□□□□ -2.72
SRP54-214ENST00000630962 NREPQ16612 68 aa-1.92□□□□□ -2.72
SRP54-214ENST00000630962 LINC00643Q86TS7 51 aa-1.92□□□□□ -2.72
SRP54-214ENST00000630962 PIK3C2BO00750 1634 aa-1.92□□□□□ -2.72
SRP54-214ENST00000630962 RPS27P42677 84 aaKnown RBP-1.93□□□□□ -2.72
SRP54-214ENST00000630962 RPS27LQ71UM5 84 aaKnown RBP-1.93□□□□□ -2.72
SRP54-214ENST00000630962 MT1MQ8N339 61 aa-1.93□□□□□ -2.72
SRP54-214ENST00000630962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.93□□□□□ -2.72
SRP54-214ENST00000630962 TLN1Q9Y490 2541 aaKnown RBP-1.93□□□□□ -2.72
SRP54-214ENST00000630962 RICTORQ6R327 1708 aa-1.94□□□□□ -2.72
SRP54-214ENST00000630962 ANKRD26Q9UPS8 1709 aa-1.94□□□□□ -2.72
SRP54-214ENST00000630962 M0R143 59 aa-1.94□□□□□ -2.72
SRP54-214ENST00000630962 MT2AP02795 61 aa-1.94□□□□□ -2.72
SRP54-214ENST00000630962 BVES-AS1Q5T3Y7 98 aa-1.94□□□□□ -2.72
SRP54-214ENST00000630962 MINOS1Q5TGZ0 78 aa-1.94□□□□□ -2.72
SRP54-214ENST00000630962 NOP10Q9NPE3 64 aaKnown RBP-1.94□□□□□ -2.72
SRP54-214ENST00000630962 TJP1Q07157 1748 aa-1.96□□□□□ -2.72
SRP54-214ENST00000630962 H3BUA1 57 aa-1.96□□□□□ -2.72
SRP54-214ENST00000630962 CRIP1P50238 77 aa-1.96□□□□□ -2.72
SRP54-214ENST00000630962 HFM1A2PYH4 1435 aa-1.97□□□□□ -2.72
SRP54-214ENST00000630962 NRAPQ86VF7 1730 aa-1.97□□□□□ -2.73
SRP54-214ENST00000630962 MAST1Q9Y2H9 1570 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 CFAP43Q8NDM7 1665 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 PVALEFA0A1B0GWK0 134 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 SFTA3P0C7M3 94 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 S100A16Q96FQ6 103 aaKnown RBP-1.98□□□□□ -2.73
SRP54-214ENST00000630962 UBL5Q9BZL1 73 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 AKAP12Q02952 1782 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 CSMD2Q7Z408 3487 aa-1.98□□□□□ -2.73
SRP54-214ENST00000630962 ARHGAP35Q9NRY4 1499 aa-1.99□□□□□ -2.73
SRP54-214ENST00000630962 LRRIQ1Q96JM4 1722 aa-1.99□□□□□ -2.73
SRP54-214ENST00000630962 A0A087WXM4 84 aa-1.99□□□□□ -2.73
SRP54-214ENST00000630962 LINC01546A6NGU7 62 aa-1.99□□□□□ -2.73
SRP54-214ENST00000630962 FCER1GP30273 86 aa-1.99□□□□□ -2.73
SRP54-214ENST00000630962 SNHG12Q9BXW3 62 aa-1.99□□□□□ -2.73
SRP54-214ENST00000630962 PYY3Q5JQD4 70 aa-2□□□□□ -2.73
SRP54-214ENST00000630962 NCBP2-AS2Q69YL0 99 aa-2□□□□□ -2.73
SRP54-214ENST00000630962 KCNQ1DNQ9H478 68 aa-2□□□□□ -2.73
SRP54-214ENST00000630962 ATP5EP2Q5VTU8 51 aa-2.01□□□□□ -2.73
SRP54-214ENST00000630962 KIF14Q15058 1648 aa-2.02□□□□□ -2.73
SRP54-214ENST00000630962 MT1BP07438 61 aa-2.02□□□□□ -2.73
SRP54-214ENST00000630962 C6orf48Q9UBA6 75 aa-2.02□□□□□ -2.73
SRP54-214ENST00000630962 RNF17Q9BXT8 1623 aaKnown RBP-2.02□□□□□ -2.73
SRP54-214ENST00000630962 HMGA1P17096 107 aaKnown RBP-2.03□□□□□ -2.73
SRP54-214ENST00000630962 FREM2Q5SZK8 3169 aa-2.03□□□□□ -2.73
SRP54-214ENST00000630962 M0QY20 66 aa-2.04□□□□□ -2.74
SRP54-214ENST00000630962 PPLO60437 1756 aa-2.04□□□□□ -2.74
SRP54-214ENST00000630962 RALGAPBQ86X10 1494 aa-2.04□□□□□ -2.74
SRP54-214ENST00000630962 BOD1L1Q8NFC6 3051 aa-2.04□□□□□ -2.74
SRP54-214ENST00000630962 MAP3K4Q9Y6R4 1608 aa-2.04□□□□□ -2.74
SRP54-214ENST00000630962 INO80Q9ULG1 1556 aaPredicted RBP-2.05□□□□□ -2.74
SRP54-214ENST00000630962 KANTRA0A1W2PQU2 76 aa-2.05□□□□□ -2.74
SRP54-214ENST00000630962 SMIM13P0DJ93 91 aa-2.05□□□□□ -2.74
SRP54-214ENST00000630962 PKIAP61925 76 aa-2.05□□□□□ -2.74
SRP54-214ENST00000630962 Q9H521 79 aa-2.05□□□□□ -2.74
SRP54-214ENST00000630962 DEFB4AO15263 64 aa-2.06□□□□□ -2.74
SRP54-214ENST00000630962 A0A1B0GUL6 1792 aa-2.06□□□□□ -2.74
SRP54-214ENST00000630962 M0QZ58 72 aa-2.07□□□□□ -2.74
SRP54-214ENST00000630962 SPART-AS1P0CW21 52 aa-2.07□□□□□ -2.74
SRP54-214ENST00000630962 CFAP54Q96N23 3096 aa-2.07□□□□□ -2.74
SRP54-214ENST00000630962 KDM5DQ9BY66 1539 aa-2.07□□□□□ -2.74
SRP54-214ENST00000630962 ETDCA0A1B0GVM5 59 aa-2.08□□□□□ -2.74
SRP54-214ENST00000630962 SMARCA2P51531 1590 aa-2.08□□□□□ -2.74
SRP54-214ENST00000630962 PRUNE2Q8WUY3 3088 aa-2.08□□□□□ -2.74
SRP54-214ENST00000630962 CRYBG3Q68DQ2 2970 aa-2.08□□□□□ -2.74
SRP54-214ENST00000630962 ERVK-7P63135 1459 aa-2.08□□□□□ -2.74
SRP54-214ENST00000630962 ABCC3O15438 1527 aa-2.09□□□□□ -2.74
SRP54-214ENST00000630962 ENHOQ6UWT2 76 aa-2.1□□□□□ -2.75
SRP54-214ENST00000630962 S100A8P05109 93 aa-2.11□□□□□ -2.75
SRP54-214ENST00000630962 VPS8Q8N3P4 1428 aa-2.11□□□□□ -2.75
SRP54-214ENST00000630962 MYO5CQ9NQX4 1742 aa-2.11□□□□□ -2.75
SRP54-214ENST00000630962 NHSQ6T4R5 1651 aa-2.12□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms