RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 LINC00483Q53H64 154 aa4.39□□□□□ -1.71
CTNNA1-244ENST00000627109 SPACA4Q8TDM5 124 aa4.39□□□□□ -1.71
CTNNA1-244ENST00000627109 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
CTNNA1-244ENST00000627109 DNAH2Q9P225 4427 aa4.39□□□□□ -1.71
CTNNA1-244ENST00000627109 FLG2Q5D862 2391 aaPredicted RBP4.38□□□□□ -1.71
CTNNA1-244ENST00000627109 H0Y9P7 68 aa4.38□□□□□ -1.71
CTNNA1-244ENST00000627109 LCE2BO14633 110 aa4.38□□□□□ -1.71
CTNNA1-244ENST00000627109 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
CTNNA1-244ENST00000627109 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
CTNNA1-244ENST00000627109 Q6ZR54 194 aa4.38□□□□□ -1.71
CTNNA1-244ENST00000627109 RTL8CO15255 209 aa4.37□□□□□ -1.71
CTNNA1-244ENST00000627109 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
CTNNA1-244ENST00000627109 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
CTNNA1-244ENST00000627109 PANO1I0J062 215 aa4.37□□□□□ -1.71
CTNNA1-244ENST00000627109 DNAH8Q96JB1 4490 aa4.37□□□□□ -1.71
CTNNA1-244ENST00000627109 A0A087WTM6 91 aa4.36□□□□□ -1.71
CTNNA1-244ENST00000627109 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
CTNNA1-244ENST00000627109 C1orf64Q8NEQ6 169 aa4.36□□□□□ -1.71
CTNNA1-244ENST00000627109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.36□□□□□ -1.71
CTNNA1-244ENST00000627109 MOBPQ13875 183 aa4.36□□□□□ -1.71
CTNNA1-244ENST00000627109 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
CTNNA1-244ENST00000627109 A8MWP4 228 aa4.35□□□□□ -1.71
CTNNA1-244ENST00000627109 Q96NJ1 140 aa4.35□□□□□ -1.71
CTNNA1-244ENST00000627109 CYP4F30PQ9H0H9 118 aa4.34□□□□□ -1.71
CTNNA1-244ENST00000627109 hDV103S1A0JD37 113 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 KRTAP10-2P60368 255 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 PLAC8Q9NZF1 115 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 H3BPC8 53 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
CTNNA1-244ENST00000627109 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
CTNNA1-244ENST00000627109 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
CTNNA1-244ENST00000627109 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
CTNNA1-244ENST00000627109 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
CTNNA1-244ENST00000627109 SMR3BP02814 79 aaPredicted RBP4.3□□□□□ -1.72
CTNNA1-244ENST00000627109 DNAH11Q96DT5 4516 aa4.3□□□□□ -1.72
CTNNA1-244ENST00000627109 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
CTNNA1-244ENST00000627109 PKD1P98161 4303 aa4.28□□□□□ -1.72
CTNNA1-244ENST00000627109 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
CTNNA1-244ENST00000627109 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
CTNNA1-244ENST00000627109 LCE2CQ5TA81 110 aa4.27□□□□□ -1.73
CTNNA1-244ENST00000627109 HYDINQ4G0P3 5121 aa4.27□□□□□ -1.73
CTNNA1-244ENST00000627109 ZNF861PO60384 105 aa4.26□□□□□ -1.73
CTNNA1-244ENST00000627109 Q1T7F1 81 aa4.26□□□□□ -1.73
CTNNA1-244ENST00000627109 SACSQ9NZJ4 4579 aa4.26□□□□□ -1.73
CTNNA1-244ENST00000627109 IGLV7-46A0A075B6I9 117 aa4.26□□□□□ -1.73
CTNNA1-244ENST00000627109 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
CTNNA1-244ENST00000627109 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
CTNNA1-244ENST00000627109 RYR3Q15413 4870 aa4.25□□□□□ -1.73
CTNNA1-244ENST00000627109 A0A1B0GVX0 72 aa4.24□□□□□ -1.73
CTNNA1-244ENST00000627109 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
CTNNA1-244ENST00000627109 FAT2Q9NYQ8 4349 aa4.24□□□□□ -1.73
CTNNA1-244ENST00000627109 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
CTNNA1-244ENST00000627109 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
CTNNA1-244ENST00000627109 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
CTNNA1-244ENST00000627109 SPAG11AQ6PDA7 123 aa4.23□□□□□ -1.73
CTNNA1-244ENST00000627109 COA5Q86WW8 74 aa4.23□□□□□ -1.73
CTNNA1-244ENST00000627109 RYR2Q92736 4967 aa4.22□□□□□ -1.73
CTNNA1-244ENST00000627109 Q6ZSA8 131 aa4.22□□□□□ -1.73
CTNNA1-244ENST00000627109 KRTAP13-3Q3SY46 172 aa4.22□□□□□ -1.73
CTNNA1-244ENST00000627109 A0A087X002 238 aa4.21□□□□□ -1.73
CTNNA1-244ENST00000627109 IGLV7-43P04211 117 aa4.21□□□□□ -1.73
CTNNA1-244ENST00000627109 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.73
CTNNA1-244ENST00000627109 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
CTNNA1-244ENST00000627109 DMBT1Q9UGM3 2413 aaPredicted RBP4.21□□□□□ -1.74
CTNNA1-244ENST00000627109 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
CTNNA1-244ENST00000627109 A8MU10 97 aa4.2□□□□□ -1.74
CTNNA1-244ENST00000627109 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
CTNNA1-244ENST00000627109 SSBP3-AS1Q7Z2R9 100 aa4.18□□□□□ -1.74
CTNNA1-244ENST00000627109 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
CTNNA1-244ENST00000627109 CSAG1Q6PB30 78 aa4.16□□□□□ -1.74
CTNNA1-244ENST00000627109 CAMK2N1Q7Z7J9 78 aa4.16□□□□□ -1.74
CTNNA1-244ENST00000627109 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.74
CTNNA1-244ENST00000627109 IGKV2-30P06310 120 aa4.15□□□□□ -1.74
CTNNA1-244ENST00000627109 KIAA1109Q2LD37 5005 aa4.15□□□□□ -1.75
CTNNA1-244ENST00000627109 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
CTNNA1-244ENST00000627109 A6NN06 94 aa4.15□□□□□ -1.75
CTNNA1-244ENST00000627109 Q5VV11 94 aa4.15□□□□□ -1.75
CTNNA1-244ENST00000627109 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-244ENST00000627109 ROMO1P60602 79 aa4.14□□□□□ -1.75
CTNNA1-244ENST00000627109 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
CTNNA1-244ENST00000627109 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
CTNNA1-244ENST00000627109 Q5VSD8 79 aa4.13□□□□□ -1.75
CTNNA1-244ENST00000627109 Q5W150 140 aa4.13□□□□□ -1.75
CTNNA1-244ENST00000627109 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
CTNNA1-244ENST00000627109 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
CTNNA1-244ENST00000627109 KRTAP1-4P0C5Y4 121 aa4.12□□□□□ -1.75
CTNNA1-244ENST00000627109 HRES1P13985 223 aa4.12□□□□□ -1.75
CTNNA1-244ENST00000627109 ACYP2P14621 99 aa4.11□□□□□ -1.75
CTNNA1-244ENST00000627109 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
CTNNA1-244ENST00000627109 SPINK1P00995 79 aa4.1□□□□□ -1.75
CTNNA1-244ENST00000627109 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
CTNNA1-244ENST00000627109 DYNC1H1Q14204 4646 aaKnown RBP4.1□□□□□ -1.75
CTNNA1-244ENST00000627109 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
CTNNA1-244ENST00000627109 FAT1Q14517 4588 aa4.08□□□□□ -1.76
CTNNA1-244ENST00000627109 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
CTNNA1-244ENST00000627109 Q8N1X5 172 aa4.07□□□□□ -1.76
CTNNA1-244ENST00000627109 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
CTNNA1-244ENST00000627109 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms