RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
SNX1-214ENST00000625244 A0A0G2JQZ4 141 aa7.09□□□□□ -1.27
SNX1-214ENST00000625244 ANKRD29Q8N6D5 301 aa7.09□□□□□ -1.27
SNX1-214ENST00000625244 A0A1B0GV72 72 aa7.08□□□□□ -1.28
SNX1-214ENST00000625244 C9JAW5 83 aa7.07□□□□□ -1.28
SNX1-214ENST00000625244 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
SNX1-214ENST00000625244 TRBV7-7A0A0K0K1E9 115 aa7.06□□□□□ -1.28
SNX1-214ENST00000625244 Q5XG85 94 aa7.06□□□□□ -1.28
SNX1-214ENST00000625244 DSCR8Q96T75 97 aa7.06□□□□□ -1.28
SNX1-214ENST00000625244 JMJD7-PLA2G4BH0Y9G9 81 aa7.05□□□□□ -1.28
SNX1-214ENST00000625244 RBM3P98179 157 aaKnown RBP7.05□□□□□ -1.28
SNX1-214ENST00000625244 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
SNX1-214ENST00000625244 SS18L2Q9UHA2 77 aa7.05□□□□□ -1.28
SNX1-214ENST00000625244 SPCS1Q9Y6A9 102 aa7.05□□□□□ -1.28
SNX1-214ENST00000625244 H3BT86 120 aa7.01□□□□□ -1.29
SNX1-214ENST00000625244 CCKP06307 115 aa7.01□□□□□ -1.29
SNX1-214ENST00000625244 MDN1Q9NU22 5596 aa7□□□□□ -1.29
SNX1-214ENST00000625244 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
SNX1-214ENST00000625244 VPS25Q9BRG1 176 aa7□□□□□ -1.29
SNX1-214ENST00000625244 A0A087WSZ3 146 aa6.99□□□□□ -1.29
SNX1-214ENST00000625244 PDE6GP18545 87 aa6.98□□□□□ -1.29
SNX1-214ENST00000625244 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
SNX1-214ENST00000625244 ATP11AUNQ6ZP68 121 aa6.98□□□□□ -1.29
SNX1-214ENST00000625244 GTF2H5Q6ZYL4 71 aa6.98□□□□□ -1.29
SNX1-214ENST00000625244 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
SNX1-214ENST00000625244 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
SNX1-214ENST00000625244 K7EP34 96 aa6.96□□□□□ -1.3
SNX1-214ENST00000625244 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
SNX1-214ENST00000625244 C14orf132Q9NPU4 83 aa6.94□□□□□ -1.3
SNX1-214ENST00000625244 Q75L30 129 aa6.93□□□□□ -1.3
SNX1-214ENST00000625244 A0A1B0GW54 56 aa6.92□□□□□ -1.3
SNX1-214ENST00000625244 Q6ZQT0 140 aa6.92□□□□□ -1.3
SNX1-214ENST00000625244 OBSCN-AS1Q96MR7 158 aa6.91□□□□□ -1.3
SNX1-214ENST00000625244 KMT2DO14686 5537 aa6.9□□□□□ -1.31
SNX1-214ENST00000625244 C20orf166-AS1Q96NR2 134 aa6.89□□□□□ -1.31
SNX1-214ENST00000625244 SIGMAR1Q99720 223 aa6.89□□□□□ -1.31
SNX1-214ENST00000625244 F8W1H4 67 aa6.87□□□□□ -1.31
SNX1-214ENST00000625244 IGKV4-1P06312 121 aa6.87□□□□□ -1.31
SNX1-214ENST00000625244 PRO0461Q9UI25 63 aa6.85□□□□□ -1.31
SNX1-214ENST00000625244 J3KT08 172 aa6.84□□□□□ -1.31
SNX1-214ENST00000625244 Q96NJ1 140 aa6.84□□□□□ -1.31
SNX1-214ENST00000625244 LINC00472Q9H8W2 130 aa6.83□□□□□ -1.32
SNX1-214ENST00000625244 FAM236DA0A1B0GTK5 79 aa6.82□□□□□ -1.32
SNX1-214ENST00000625244 FAM236CP0DP71 79 aa6.82□□□□□ -1.32
SNX1-214ENST00000625244 NREPQ16612 68 aa6.82□□□□□ -1.32
SNX1-214ENST00000625244 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
SNX1-214ENST00000625244 NDUFB1O75438 58 aa6.8□□□□□ -1.32
SNX1-214ENST00000625244 ETDBQ3ZM63 59 aa6.78□□□□□ -1.32
SNX1-214ENST00000625244 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
SNX1-214ENST00000625244 LINC00313P59037 77 aa6.77□□□□□ -1.33
SNX1-214ENST00000625244 DSCR10P59022 87 aa6.76□□□□□ -1.33
SNX1-214ENST00000625244 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
SNX1-214ENST00000625244 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
SNX1-214ENST00000625244 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
SNX1-214ENST00000625244 A0A1B0GV90 55 aa6.74□□□□□ -1.33
SNX1-214ENST00000625244 KRTAP2-3P0C7H8 128 aa6.74□□□□□ -1.33
SNX1-214ENST00000625244 KRTAP2-4Q9BYR9 128 aa6.74□□□□□ -1.33
SNX1-214ENST00000625244 A8MWP4 228 aa6.73□□□□□ -1.33
SNX1-214ENST00000625244 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
SNX1-214ENST00000625244 BPY2O14599 106 aa6.72□□□□□ -1.33
SNX1-214ENST00000625244 Q6ZVQ6 151 aa6.71□□□□□ -1.34
SNX1-214ENST00000625244 Q8N9P0 234 aaPredicted RBP6.71□□□□□ -1.34
SNX1-214ENST00000625244 A8MUU9 505 aa6.7□□□□□ -1.34
SNX1-214ENST00000625244 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
SNX1-214ENST00000625244 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
SNX1-214ENST00000625244 RBM12B-AS1Q9P1G2 102 aa6.69□□□□□ -1.34
SNX1-214ENST00000625244 HRES1P13985 223 aa6.68□□□□□ -1.34
SNX1-214ENST00000625244 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
SNX1-214ENST00000625244 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
SNX1-214ENST00000625244 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
SNX1-214ENST00000625244 ACYP1P07311 99 aa6.66□□□□□ -1.34
SNX1-214ENST00000625244 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
SNX1-214ENST00000625244 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.34
SNX1-214ENST00000625244 K7EQZ3 153 aa6.64□□□□□ -1.35
SNX1-214ENST00000625244 FAM240AA0A1B0GVK7 77 aa6.62□□□□□ -1.35
SNX1-214ENST00000625244 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
SNX1-214ENST00000625244 hDV103S1A0JD37 113 aa6.59□□□□□ -1.35
SNX1-214ENST00000625244 J3QR89 54 aa6.59□□□□□ -1.35
SNX1-214ENST00000625244 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
SNX1-214ENST00000625244 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
SNX1-214ENST00000625244 A6NN06 94 aa6.58□□□□□ -1.36
SNX1-214ENST00000625244 CXCL6P80162 114 aa6.58□□□□□ -1.36
SNX1-214ENST00000625244 Q8N9L7 120 aa6.58□□□□□ -1.36
SNX1-214ENST00000625244 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
SNX1-214ENST00000625244 NDUFS5O43920 106 aa6.56□□□□□ -1.36
SNX1-214ENST00000625244 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
SNX1-214ENST00000625244 WFDC13Q8IUB5 93 aa6.55□□□□□ -1.36
SNX1-214ENST00000625244 ATP5EP2Q5VTU8 51 aa6.54□□□□□ -1.36
SNX1-214ENST00000625244 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
SNX1-214ENST00000625244 HCG22E2RYF7 251 aa6.53□□□□□ -1.36
SNX1-214ENST00000625244 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
SNX1-214ENST00000625244 KRTAP2-2Q9BYT5 123 aa6.48□□□□□ -1.37
SNX1-214ENST00000625244 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
SNX1-214ENST00000625244 HIST1H4AP62805 103 aaKnown RBP6.47□□□□□ -1.37
SNX1-214ENST00000625244 K7ERU9 68 aa6.43□□□□□ -1.38
SNX1-214ENST00000625244 SPINK7P58062 85 aa6.42□□□□□ -1.38
SNX1-214ENST00000625244 KRTAP4-12Q9BQ66 201 aa6.42□□□□□ -1.38
SNX1-214ENST00000625244 TP53AIP1Q9HCN2 124 aa6.42□□□□□ -1.38
SNX1-214ENST00000625244 MT1BP07438 61 aa6.4□□□□□ -1.38
SNX1-214ENST00000625244 SPRR2EP22531 72 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms