RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
CLK1-215ENST00000621181 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
CLK1-215ENST00000621181 SPRR1AP35321 89 aa4.53□□□□□ -1.68
CLK1-215ENST00000621181 TMEM258P61165 79 aa4.53□□□□□ -1.68
CLK1-215ENST00000621181 Q8N377 158 aa4.53□□□□□ -1.68
CLK1-215ENST00000621181 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
CLK1-215ENST00000621181 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
CLK1-215ENST00000621181 FAM229BQ4G0N7 80 aa4.52□□□□□ -1.69
CLK1-215ENST00000621181 NKAPP1Q8N9T2 125 aa4.51□□□□□ -1.69
CLK1-215ENST00000621181 Q9BRP9 147 aa4.51□□□□□ -1.69
CLK1-215ENST00000621181 J3KT08 172 aa4.5□□□□□ -1.69
CLK1-215ENST00000621181 PRYO14603 147 aa4.5□□□□□ -1.69
CLK1-215ENST00000621181 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
CLK1-215ENST00000621181 Q6ZRX8 168 aa4.49□□□□□ -1.69
CLK1-215ENST00000621181 PRLHP81277 87 aa4.49□□□□□ -1.69
CLK1-215ENST00000621181 KLKP1Q107X0 134 aa4.49□□□□□ -1.69
CLK1-215ENST00000621181 DHRS4-AS1Q9P1J3 65 aa4.49□□□□□ -1.69
CLK1-215ENST00000621181 H7BZZ5 65 aa4.48□□□□□ -1.69
CLK1-215ENST00000621181 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
CLK1-215ENST00000621181 C20orf197Q8N268 126 aa4.48□□□□□ -1.69
CLK1-215ENST00000621181 FSIP2Q5CZC0 6907 aa4.47□□□□□ -1.69
CLK1-215ENST00000621181 A0A1B0GW54 56 aa4.47□□□□□ -1.69
CLK1-215ENST00000621181 A0A1W2PNM2 257 aa4.47□□□□□ -1.69
CLK1-215ENST00000621181 ERC2-IT1O76042 136 aa4.46□□□□□ -1.7
CLK1-215ENST00000621181 SPAG11AQ6PDA7 123 aa4.46□□□□□ -1.7
CLK1-215ENST00000621181 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
CLK1-215ENST00000621181 ST20-AS1Q8NBB2 130 aa4.46□□□□□ -1.7
CLK1-215ENST00000621181 SMIM29Q86T20 159 aa4.45□□□□□ -1.7
CLK1-215ENST00000621181 DEFB105AQ8NG35 78 aa4.45□□□□□ -1.7
CLK1-215ENST00000621181 SPRR4Q96PI1 79 aa4.45□□□□□ -1.7
CLK1-215ENST00000621181 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
CLK1-215ENST00000621181 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
CLK1-215ENST00000621181 NREPQ16612 68 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 ASB16-AS1Q495Z4 193 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 Q8N9L7 120 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 Q8NBF4 154 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 BPY2O14599 106 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 HIGD2AQ9BW72 106 aa4.44□□□□□ -1.7
CLK1-215ENST00000621181 SEC61BP60468 96 aaKnown RBP4.43□□□□□ -1.7
CLK1-215ENST00000621181 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
CLK1-215ENST00000621181 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
CLK1-215ENST00000621181 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
CLK1-215ENST00000621181 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
CLK1-215ENST00000621181 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
CLK1-215ENST00000621181 IGLV8-61A0A075B6I0 122 aa4.42□□□□□ -1.7
CLK1-215ENST00000621181 SNURFQ9Y675 71 aa4.42□□□□□ -1.7
CLK1-215ENST00000621181 DSCR10P59022 87 aa4.41□□□□□ -1.7
CLK1-215ENST00000621181 Q5XG85 94 aa4.41□□□□□ -1.7
CLK1-215ENST00000621181 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
CLK1-215ENST00000621181 NDUFC1O43677 76 aa4.4□□□□□ -1.7
CLK1-215ENST00000621181 ZNF706Q9Y5V0 76 aaPredicted RBP4.4□□□□□ -1.7
CLK1-215ENST00000621181 SERP1Q9Y6X1 66 aa4.4□□□□□ -1.7
CLK1-215ENST00000621181 SPINK1P00995 79 aa4.39□□□□□ -1.71
CLK1-215ENST00000621181 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
CLK1-215ENST00000621181 F8WEM9 126 aa4.39□□□□□ -1.71
CLK1-215ENST00000621181 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
CLK1-215ENST00000621181 SPRR1BP22528 89 aa4.37□□□□□ -1.71
CLK1-215ENST00000621181 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
CLK1-215ENST00000621181 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
CLK1-215ENST00000621181 A0A0G2JQZ4 141 aa4.36□□□□□ -1.71
CLK1-215ENST00000621181 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
CLK1-215ENST00000621181 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
CLK1-215ENST00000621181 K7EQZ3 153 aa4.35□□□□□ -1.71
CLK1-215ENST00000621181 C4orf26Q17RF5 130 aa4.35□□□□□ -1.71
CLK1-215ENST00000621181 MUC17Q685J3 4493 aa4.35□□□□□ -1.71
CLK1-215ENST00000621181 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
CLK1-215ENST00000621181 MOBPQ13875 183 aa4.35□□□□□ -1.71
CLK1-215ENST00000621181 C5orf47Q569G3 176 aa4.34□□□□□ -1.71
CLK1-215ENST00000621181 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
CLK1-215ENST00000621181 LINC00483Q53H64 154 aa4.32□□□□□ -1.72
CLK1-215ENST00000621181 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
CLK1-215ENST00000621181 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
CLK1-215ENST00000621181 MT1HP80294 61 aa4.31□□□□□ -1.72
CLK1-215ENST00000621181 SSBP3-AS1Q7Z2R9 100 aa4.31□□□□□ -1.72
CLK1-215ENST00000621181 KRTAP4-11Q9BYQ6 195 aa4.31□□□□□ -1.72
CLK1-215ENST00000621181 A0A087WSZ3 146 aa4.3□□□□□ -1.72
CLK1-215ENST00000621181 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
CLK1-215ENST00000621181 LINC00472Q9H8W2 130 aa4.3□□□□□ -1.72
CLK1-215ENST00000621181 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CLK1-215ENST00000621181 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
CLK1-215ENST00000621181 DEFB116Q30KQ4 102 aa4.28□□□□□ -1.72
CLK1-215ENST00000621181 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
CLK1-215ENST00000621181 PRR15Q8IV56 129 aa4.28□□□□□ -1.72
CLK1-215ENST00000621181 M0R2T5 61 aa4.27□□□□□ -1.73
CLK1-215ENST00000621181 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
CLK1-215ENST00000621181 A8MWP4 228 aa4.26□□□□□ -1.73
CLK1-215ENST00000621181 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
CLK1-215ENST00000621181 CYP4F30PQ9H0H9 118 aa4.25□□□□□ -1.73
CLK1-215ENST00000621181 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
CLK1-215ENST00000621181 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
CLK1-215ENST00000621181 Q96NJ1 140 aa4.25□□□□□ -1.73
CLK1-215ENST00000621181 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
CLK1-215ENST00000621181 LIMD2Q9BT23 127 aa4.24□□□□□ -1.73
CLK1-215ENST00000621181 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
CLK1-215ENST00000621181 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
CLK1-215ENST00000621181 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
CLK1-215ENST00000621181 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
CLK1-215ENST00000621181 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms