RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 RBM3P98179 157 aaKnown RBP5.87□□□□□ -1.47
TARDBP-221ENST00000619555 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
TARDBP-221ENST00000619555 SS18L2Q9UHA2 77 aa5.86□□□□□ -1.47
TARDBP-221ENST00000619555 PCP4L1A6NKN8 68 aa5.85□□□□□ -1.47
TARDBP-221ENST00000619555 DSCR8Q96T75 97 aa5.84□□□□□ -1.47
TARDBP-221ENST00000619555 COL5A1-AS1Q5SY13 56 aa5.83□□□□□ -1.48
TARDBP-221ENST00000619555 OBSCN-AS1Q96MR7 158 aa5.83□□□□□ -1.48
TARDBP-221ENST00000619555 VPS25Q9BRG1 176 aa5.83□□□□□ -1.48
TARDBP-221ENST00000619555 Q6ZQT0 140 aa5.82□□□□□ -1.48
TARDBP-221ENST00000619555 JMJD7-PLA2G4BH0Y9G9 81 aa5.81□□□□□ -1.48
TARDBP-221ENST00000619555 C14orf132Q9NPU4 83 aa5.81□□□□□ -1.48
TARDBP-221ENST00000619555 SPCS1Q9Y6A9 102 aa5.81□□□□□ -1.48
TARDBP-221ENST00000619555 LOC110117498A0A087WWA1 95 aa5.8□□□□□ -1.48
TARDBP-221ENST00000619555 H3BT86 120 aa5.8□□□□□ -1.48
TARDBP-221ENST00000619555 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
TARDBP-221ENST00000619555 ATP11AUNQ6ZP68 121 aa5.8□□□□□ -1.48
TARDBP-221ENST00000619555 Q75L30 129 aa5.8□□□□□ -1.48
TARDBP-221ENST00000619555 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
TARDBP-221ENST00000619555 IGKV4-1P06312 121 aa5.78□□□□□ -1.48
TARDBP-221ENST00000619555 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
TARDBP-221ENST00000619555 K7EP34 96 aa5.76□□□□□ -1.49
TARDBP-221ENST00000619555 DSCR10P59022 87 aa5.76□□□□□ -1.49
TARDBP-221ENST00000619555 KRTAP9-9Q9BYP9 154 aa5.76□□□□□ -1.49
TARDBP-221ENST00000619555 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
TARDBP-221ENST00000619555 PRO0461Q9UI25 63 aa5.76□□□□□ -1.49
TARDBP-221ENST00000619555 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
TARDBP-221ENST00000619555 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
TARDBP-221ENST00000619555 USH2AO75445 5202 aa5.75□□□□□ -1.49
TARDBP-221ENST00000619555 PDE6GP18545 87 aa5.74□□□□□ -1.49
TARDBP-221ENST00000619555 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
TARDBP-221ENST00000619555 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
TARDBP-221ENST00000619555 A0A1B0GW54 56 aa5.71□□□□□ -1.5
TARDBP-221ENST00000619555 A8MUU9 505 aa5.71□□□□□ -1.5
TARDBP-221ENST00000619555 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
TARDBP-221ENST00000619555 LINC00313P59037 77 aa5.7□□□□□ -1.5
TARDBP-221ENST00000619555 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
TARDBP-221ENST00000619555 C21orf62-AS1Q17RA5 79 aa5.69□□□□□ -1.5
TARDBP-221ENST00000619555 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
TARDBP-221ENST00000619555 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
TARDBP-221ENST00000619555 J3KT08 172 aa5.67□□□□□ -1.5
TARDBP-221ENST00000619555 GTF2H5Q6ZYL4 71 aa5.66□□□□□ -1.5
TARDBP-221ENST00000619555 IGKV3D-7A0A0C4DH55 119 aa5.65□□□□□ -1.5
TARDBP-221ENST00000619555 A8MWP4 228 aa5.65□□□□□ -1.5
TARDBP-221ENST00000619555 NREPQ16612 68 aa5.65□□□□□ -1.5
TARDBP-221ENST00000619555 C8orf87E5RJ46 101 aa5.64□□□□□ -1.51
TARDBP-221ENST00000619555 F8W1H4 67 aa5.62□□□□□ -1.51
TARDBP-221ENST00000619555 ETDBQ3ZM63 59 aa5.62□□□□□ -1.51
TARDBP-221ENST00000619555 Q6ZVQ6 151 aa5.62□□□□□ -1.51
TARDBP-221ENST00000619555 NDUFB1O75438 58 aa5.61□□□□□ -1.51
TARDBP-221ENST00000619555 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
TARDBP-221ENST00000619555 K7EQZ3 153 aa5.6□□□□□ -1.51
TARDBP-221ENST00000619555 MT2AP02795 61 aa5.6□□□□□ -1.51
TARDBP-221ENST00000619555 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
TARDBP-221ENST00000619555 LINC00846Q9NV44 126 aa5.6□□□□□ -1.51
TARDBP-221ENST00000619555 FAM236DA0A1B0GTK5 79 aa5.59□□□□□ -1.51
TARDBP-221ENST00000619555 FAM236CP0DP71 79 aa5.59□□□□□ -1.51
TARDBP-221ENST00000619555 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
TARDBP-221ENST00000619555 MMP24-AS1A0A0U1RRL7 71 aa5.58□□□□□ -1.52
TARDBP-221ENST00000619555 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
TARDBP-221ENST00000619555 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
TARDBP-221ENST00000619555 Q8N9P0 234 aaPredicted RBP5.58□□□□□ -1.52
TARDBP-221ENST00000619555 BPY2O14599 106 aa5.57□□□□□ -1.52
TARDBP-221ENST00000619555 HRES1P13985 223 aa5.57□□□□□ -1.52
TARDBP-221ENST00000619555 A0A1B0GV90 55 aa5.56□□□□□ -1.52
TARDBP-221ENST00000619555 MT1FP04733 61 aa5.56□□□□□ -1.52
TARDBP-221ENST00000619555 Q8N9L7 120 aa5.56□□□□□ -1.52
TARDBP-221ENST00000619555 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
TARDBP-221ENST00000619555 RBM12B-AS1Q9P1G2 102 aa5.54□□□□□ -1.52
TARDBP-221ENST00000619555 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
TARDBP-221ENST00000619555 UBL5Q9BZL1 73 aa5.53□□□□□ -1.52
TARDBP-221ENST00000619555 LCE1DQ5T752 114 aa5.52□□□□□ -1.53
TARDBP-221ENST00000619555 TMEM254Q8TBM7 123 aa5.52□□□□□ -1.53
TARDBP-221ENST00000619555 MRPL34Q9BQ48 92 aaKnown RBP5.52□□□□□ -1.53
TARDBP-221ENST00000619555 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
TARDBP-221ENST00000619555 hDV103S1A0JD37 113 aa5.51□□□□□ -1.53
TARDBP-221ENST00000619555 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
TARDBP-221ENST00000619555 LCE4AQ5TA78 99 aa5.51□□□□□ -1.53
TARDBP-221ENST00000619555 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
TARDBP-221ENST00000619555 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
TARDBP-221ENST00000619555 CASC2Q6XLA1 102 aa5.46□□□□□ -1.54
TARDBP-221ENST00000619555 NDUFS5O43920 106 aa5.45□□□□□ -1.54
TARDBP-221ENST00000619555 SPINK7P58062 85 aa5.45□□□□□ -1.54
TARDBP-221ENST00000619555 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
TARDBP-221ENST00000619555 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
TARDBP-221ENST00000619555 FAM240AA0A1B0GVK7 77 aa5.44□□□□□ -1.54
TARDBP-221ENST00000619555 CXCL6P80162 114 aa5.44□□□□□ -1.54
TARDBP-221ENST00000619555 Q5W150 140 aa5.44□□□□□ -1.54
TARDBP-221ENST00000619555 HCG22E2RYF7 251 aa5.43□□□□□ -1.54
TARDBP-221ENST00000619555 ACYP1P07311 99 aa5.42□□□□□ -1.54
TARDBP-221ENST00000619555 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
TARDBP-221ENST00000619555 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
TARDBP-221ENST00000619555 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
TARDBP-221ENST00000619555 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
TARDBP-221ENST00000619555 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
TARDBP-221ENST00000619555 C7orf65Q6ZTY9 151 aa5.33□□□□□ -1.56
TARDBP-221ENST00000619555 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
TARDBP-221ENST00000619555 A0A087WVE0 104 aa5.31□□□□□ -1.56
TARDBP-221ENST00000619555 HIST1H4AP62805 103 aaKnown RBP5.31□□□□□ -1.56
TARDBP-221ENST00000619555 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
TARDBP-221ENST00000619555 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms