RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 LCE2AQ5TA79 106 aaPredicted RBP13.43□□□□□ -0.26
PMS1-220ENST00000618056 PCOTHQ58A44 107 aa13.42□□□□□ -0.26
PMS1-220ENST00000618056 A0A087WSZ3 146 aa13.4□□□□□ -0.26
PMS1-220ENST00000618056 A0A1W2PNM2 257 aa13.39□□□□□ -0.27
PMS1-220ENST00000618056 UBL5Q9BZL1 73 aa13.39□□□□□ -0.27
PMS1-220ENST00000618056 RPL37P61927 97 aaKnown RBP13.38□□□□□ -0.27
PMS1-220ENST00000618056 PCP4P48539 62 aa13.33□□□□□ -0.28
PMS1-220ENST00000618056 ATP5EP2Q5VTU8 51 aa13.33□□□□□ -0.28
PMS1-220ENST00000618056 IMUPQ9GZP8 106 aa13.33□□□□□ -0.28
PMS1-220ENST00000618056 Q96NJ1 140 aa13.31□□□□□ -0.28
PMS1-220ENST00000618056 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
PMS1-220ENST00000618056 Q6ZVQ6 151 aa13.28□□□□□ -0.28
PMS1-220ENST00000618056 A0A1B0GW54 56 aa13.27□□□□□ -0.29
PMS1-220ENST00000618056 Q75L30 129 aa13.23□□□□□ -0.29
PMS1-220ENST00000618056 KRTAP19-2Q3LHN2 52 aa13.17□□□□□ -0.3
PMS1-220ENST00000618056 NREPQ16612 68 aa13.16□□□□□ -0.3
PMS1-220ENST00000618056 CXCL6P80162 114 aa13.16□□□□□ -0.3
PMS1-220ENST00000618056 LCE2CQ5TA81 110 aa13.16□□□□□ -0.3
PMS1-220ENST00000618056 LINC00472Q9H8W2 130 aa13.15□□□□□ -0.3
PMS1-220ENST00000618056 FAM236AA0A1B0GUQ0 79 aa13.14□□□□□ -0.31
PMS1-220ENST00000618056 FAM236BA0A1B0GV22 79 aa13.14□□□□□ -0.31
PMS1-220ENST00000618056 IGKV4-1P06312 121 aa13.14□□□□□ -0.31
PMS1-220ENST00000618056 HIST1H4AP62805 103 aaKnown RBP13.13□□□□□ -0.31
PMS1-220ENST00000618056 ATP11AUNQ6ZP68 121 aa13.13□□□□□ -0.31
PMS1-220ENST00000618056 C20orf166-AS1Q96NR2 134 aa13.13□□□□□ -0.31
PMS1-220ENST00000618056 A8MUU9 505 aa13.1□□□□□ -0.31
PMS1-220ENST00000618056 DSCR10P59022 87 aa13.09□□□□□ -0.31
PMS1-220ENST00000618056 ANAPC13Q9BS18 74 aa13.09□□□□□ -0.31
PMS1-220ENST00000618056 A0A087WVE0 104 aa13.07□□□□□ -0.32
PMS1-220ENST00000618056 BPY2O14599 106 aa13.06□□□□□ -0.32
PMS1-220ENST00000618056 DEFB116Q30KQ4 102 aa13.06□□□□□ -0.32
PMS1-220ENST00000618056 LINC00313P59037 77 aa13.05□□□□□ -0.32
PMS1-220ENST00000618056 KRTAP16-1A8MUX0 517 aa12.99□□□□□ -0.33
PMS1-220ENST00000618056 ATOX1O00244 68 aa12.98□□□□□ -0.33
PMS1-220ENST00000618056 MT1HP80294 61 aa12.97□□□□□ -0.33
PMS1-220ENST00000618056 NOTCH2NLQ7Z3S9 236 aa12.97□□□□□ -0.33
PMS1-220ENST00000618056 IGHV6-1A0A0B4J1U7 121 aa12.96□□□□□ -0.34
PMS1-220ENST00000618056 J3KT08 172 aa12.95□□□□□ -0.34
PMS1-220ENST00000618056 A0A1B0GVX0 72 aa12.93□□□□□ -0.34
PMS1-220ENST00000618056 FLGP20930 4061 aaPredicted RBP12.92□□□□□ -0.34
PMS1-220ENST00000618056 Q8N9L7 120 aa12.91□□□□□ -0.34
PMS1-220ENST00000618056 C8orf87E5RJ46 101 aa12.91□□□□□ -0.34
PMS1-220ENST00000618056 COX6B2Q6YFQ2 88 aa12.91□□□□□ -0.34
PMS1-220ENST00000618056 KRTAP9-2Q9BYQ4 174 aa12.91□□□□□ -0.34
PMS1-220ENST00000618056 K7EQZ3 153 aa12.82□□□□□ -0.36
PMS1-220ENST00000618056 NDUFB1O75438 58 aa12.81□□□□□ -0.36
PMS1-220ENST00000618056 A8MWP4 228 aa12.79□□□□□ -0.36
PMS1-220ENST00000618056 SERP2Q8N6R1 65 aa12.79□□□□□ -0.36
PMS1-220ENST00000618056 SMIM20Q8N5G0 67 aa12.78□□□□□ -0.36
PMS1-220ENST00000618056 CCDC179H3BU77 68 aa12.78□□□□□ -0.36
PMS1-220ENST00000618056 COX7CP15954 63 aa12.78□□□□□ -0.36
PMS1-220ENST00000618056 UQCRQO14949 82 aa12.76□□□□□ -0.37
PMS1-220ENST00000618056 TRAV7A0A075B6U4 112 aa12.72□□□□□ -0.37
PMS1-220ENST00000618056 M0R2T5 61 aa12.72□□□□□ -0.37
PMS1-220ENST00000618056 HCG22E2RYF7 251 aa12.71□□□□□ -0.38
PMS1-220ENST00000618056 PRR15Q8IV56 129 aa12.71□□□□□ -0.38
PMS1-220ENST00000618056 C8orf17Q9NRJ1 99 aa12.71□□□□□ -0.38
PMS1-220ENST00000618056 LORP23490 312 aaPredicted RBP12.7□□□□□ -0.38
PMS1-220ENST00000618056 KRTAP10-6P60371 365 aaPredicted RBP12.7□□□□□ -0.38
PMS1-220ENST00000618056 Q8N9P0 234 aaPredicted RBP12.7□□□□□ -0.38
PMS1-220ENST00000618056 LCE2DQ5TA82 110 aaPredicted RBP12.66□□□□□ -0.38
PMS1-220ENST00000618056 ZCCHC13Q8WW36 166 aaKnown RBP12.65□□□□□ -0.38
PMS1-220ENST00000618056 WFDC13Q8IUB5 93 aa12.61□□□□□ -0.39
PMS1-220ENST00000618056 HRES1P13985 223 aa12.6□□□□□ -0.39
PMS1-220ENST00000618056 MPLKIPQ8TAP9 179 aa12.59□□□□□ -0.39
PMS1-220ENST00000618056 OCR1Q9BZK8 76 aa12.59□□□□□ -0.39
PMS1-220ENST00000618056 CASC2Q6XLA1 102 aa12.58□□□□□ -0.4
PMS1-220ENST00000618056 MMP24-AS1A0A0U1RRL7 71 aa12.56□□□□□ -0.4
PMS1-220ENST00000618056 TMEM254Q8TBM7 123 aa12.54□□□□□ -0.4
PMS1-220ENST00000618056 RBM12B-AS1Q9P1G2 102 aa12.54□□□□□ -0.4
PMS1-220ENST00000618056 C20orf197Q8N268 126 aa12.52□□□□□ -0.41
PMS1-220ENST00000618056 FAM236DA0A1B0GTK5 79 aa12.51□□□□□ -0.41
PMS1-220ENST00000618056 FAM236CP0DP71 79 aa12.51□□□□□ -0.41
PMS1-220ENST00000618056 MRPL34Q9BQ48 92 aaKnown RBP12.51□□□□□ -0.41
PMS1-220ENST00000618056 SPINK7P58062 85 aa12.5□□□□□ -0.41
PMS1-220ENST00000618056 hDV103S1A0JD37 113 aa12.49□□□□□ -0.41
PMS1-220ENST00000618056 KLKP1Q107X0 134 aa12.43□□□□□ -0.42
PMS1-220ENST00000618056 CYSTM1Q9H1C7 97 aa12.41□□□□□ -0.42
PMS1-220ENST00000618056 KRTAP9-6A0A140TA67 174 aa12.4□□□□□ -0.43
PMS1-220ENST00000618056 SNURFQ9Y675 71 aa12.4□□□□□ -0.43
PMS1-220ENST00000618056 C5orf47Q569G3 176 aa12.38□□□□□ -0.43
PMS1-220ENST00000618056 FSIP2Q5CZC0 6907 aa12.35□□□□□ -0.43
PMS1-220ENST00000618056 NDUFS5O43920 106 aa12.35□□□□□ -0.43
PMS1-220ENST00000618056 NDUFC1O43677 76 aa12.34□□□□□ -0.43
PMS1-220ENST00000618056 TMEM258P61165 79 aa12.34□□□□□ -0.43
PMS1-220ENST00000618056 TP53AIP1Q9HCN2 124 aa12.34□□□□□ -0.43
PMS1-220ENST00000618056 MP68P56378 58 aa12.32□□□□□ -0.44
PMS1-220ENST00000618056 KRTAP9-8Q9BYQ0 159 aa12.31□□□□□ -0.44
PMS1-220ENST00000618056 H0Y9P7 68 aa12.28□□□□□ -0.44
PMS1-220ENST00000618056 H7BZZ5 65 aa12.27□□□□□ -0.44
PMS1-220ENST00000618056 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
PMS1-220ENST00000618056 H3BPC8 53 aa12.26□□□□□ -0.45
PMS1-220ENST00000618056 Q5W150 140 aa12.23□□□□□ -0.45
PMS1-220ENST00000618056 CRCT1Q9UGL9 99 aa12.22□□□□□ -0.45
PMS1-220ENST00000618056 LINC00208Q96KT6 92 aa12.2□□□□□ -0.46
PMS1-220ENST00000618056 C7orf65Q6ZTY9 151 aa12.16□□□□□ -0.46
PMS1-220ENST00000618056 IGKV2D-30A0A075B6S6 120 aa12.14□□□□□ -0.47
PMS1-220ENST00000618056 MT2AP02795 61 aa12.14□□□□□ -0.47
PMS1-220ENST00000618056 IGKV2-30P06310 120 aa12.14□□□□□ -0.47
PMS1-220ENST00000618056 ATP5EP56381 51 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms