RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352		A0A1B0GVX0	72 aa		12.65	□□□□□ -0.38
ACACA-238	ENST00000616352	IGKV3D-7	A0A0C4DH55	119 aa		12.64	□□□□□ -0.39
ACACA-238	ENST00000616352	C9orf92	A6NGG3	77 aa		12.63	□□□□□ -0.39
ACACA-238	ENST00000616352	LRP2	P98164	4655 aa		12.63	□□□□□ -0.39
ACACA-238	ENST00000616352	NDUFB1	O75438	58 aa		12.62	□□□□□ -0.39
ACACA-238	ENST00000616352	IGHV6-1	A0A0B4J1U7	121 aa		12.61	□□□□□ -0.39
ACACA-238	ENST00000616352		K7EQZ3	153 aa		12.6	□□□□□ -0.39
ACACA-238	ENST00000616352	CXCL6	P80162	114 aa		12.6	□□□□□ -0.39
ACACA-238	ENST00000616352	PRR15	Q8IV56	129 aa		12.6	□□□□□ -0.39
ACACA-238	ENST00000616352	NOTCH2NL	Q7Z3S9	236 aa		12.59	□□□□□ -0.39
ACACA-238	ENST00000616352	CDIP1	Q9H305	208 aa		12.58	□□□□□ -0.4
ACACA-238	ENST00000616352	LINC00643	Q86TS7	51 aa		12.56	□□□□□ -0.4
ACACA-238	ENST00000616352		Q8N9L7	120 aa		12.56	□□□□□ -0.4
ACACA-238	ENST00000616352	LINC00313	P59037	77 aa		12.55	□□□□□ -0.4
ACACA-238	ENST00000616352	C8orf87	E5RJ46	101 aa		12.55	□□□□□ -0.4
ACACA-238	ENST00000616352	ATP5EP2	Q5VTU8	51 aa		12.55	□□□□□ -0.4
ACACA-238	ENST00000616352	XP32	Q5T750	250 aa		12.54	□□□□□ -0.4
ACACA-238	ENST00000616352	C8orf17	Q9NRJ1	99 aa		12.51	□□□□□ -0.41
ACACA-238	ENST00000616352	KRTAP16-1	A8MUX0	517 aa		12.5	□□□□□ -0.41
ACACA-238	ENST00000616352	MMP24-AS1	A0A0U1RRL7	71 aa		12.48	□□□□□ -0.41
ACACA-238	ENST00000616352	C20orf166-AS1	Q96NR2	134 aa		12.41	□□□□□ -0.42
ACACA-238	ENST00000616352		A8MUU9	505 aa		12.4	□□□□□ -0.42
ACACA-238	ENST00000616352	hDV103S1	A0JD37	113 aa		12.39	□□□□□ -0.43
ACACA-238	ENST00000616352		Q75L30	129 aa		12.39	□□□□□ -0.43
ACACA-238	ENST00000616352	UBR4	Q5T4S7	5183 aa		12.39	□□□□□ -0.43
ACACA-238	ENST00000616352	MUC17	Q685J3	4493 aa		12.38	□□□□□ -0.43
ACACA-238	ENST00000616352	RPL37	P61927	97 aa	Known RBP	12.37	□□□□□ -0.43
ACACA-238	ENST00000616352	HCG22	E2RYF7	251 aa		12.37	□□□□□ -0.43
ACACA-238	ENST00000616352	TMEM254	Q8TBM7	123 aa		12.37	□□□□□ -0.43
ACACA-238	ENST00000616352	HIST1H4A	P62805	103 aa	Known RBP	12.36	□□□□□ -0.43
ACACA-238	ENST00000616352	CASC2	Q6XLA1	102 aa		12.35	□□□□□ -0.43
ACACA-238	ENST00000616352	WFDC13	Q8IUB5	93 aa		12.35	□□□□□ -0.43
ACACA-238	ENST00000616352		Q8N9P0	234 aa	Predicted RBP	12.34	□□□□□ -0.43
ACACA-238	ENST00000616352	MRPL34	Q9BQ48	92 aa	Known RBP	12.34	□□□□□ -0.43
ACACA-238	ENST00000616352	MT-ATP8	P03928	68 aa		12.31	□□□□□ -0.44
ACACA-238	ENST00000616352		A0A087WVE0	104 aa		12.29	□□□□□ -0.44
ACACA-238	ENST00000616352	SEC61B	P60468	96 aa	Known RBP	12.27	□□□□□ -0.44
ACACA-238	ENST00000616352	IMUP	Q9GZP8	106 aa		12.24	□□□□□ -0.45
ACACA-238	ENST00000616352	PCOTH	Q58A44	107 aa		12.22	□□□□□ -0.45
ACACA-238	ENST00000616352	ATP11AUN	Q6ZP68	121 aa		12.21	□□□□□ -0.46
ACACA-238	ENST00000616352	RNF213	Q63HN8	5207 aa		12.19	□□□□□ -0.46
ACACA-238	ENST00000616352	NDUFS5	O43920	106 aa		12.19	□□□□□ -0.46
ACACA-238	ENST00000616352	ZCCHC13	Q8WW36	166 aa	Known RBP	12.15	□□□□□ -0.47
ACACA-238	ENST00000616352	MUC2	Q02817	5179 aa		12.13	□□□□□ -0.47
ACACA-238	ENST00000616352	KRTAP4-1	Q9BYQ7	146 aa		12.08	□□□□□ -0.48
ACACA-238	ENST00000616352	TP53AIP1	Q9HCN2	124 aa		12.08	□□□□□ -0.48
ACACA-238	ENST00000616352		Q5W150	140 aa		12.07	□□□□□ -0.48
ACACA-238	ENST00000616352	FAM236A	A0A1B0GUQ0	79 aa		12.01	□□□□□ -0.49
ACACA-238	ENST00000616352	FAM236B	A0A1B0GV22	79 aa		12.01	□□□□□ -0.49
ACACA-238	ENST00000616352	OCR1	Q9BZK8	76 aa		11.99	□□□□□ -0.49
ACACA-238	ENST00000616352	SCGB1A1	P11684	91 aa		11.97	□□□□□ -0.49
ACACA-238	ENST00000616352	UQCRQ	O14949	82 aa		11.95	□□□□□ -0.5
ACACA-238	ENST00000616352	TRAV22	A0A0B4J277	110 aa		11.91	□□□□□ -0.5
ACACA-238	ENST00000616352	SPINK7	P58062	85 aa		11.89	□□□□□ -0.51
ACACA-238	ENST00000616352	ATOX1	O00244	68 aa		11.84	□□□□□ -0.51
ACACA-238	ENST00000616352	IGKV2D-30	A0A075B6S6	120 aa		11.83	□□□□□ -0.52
ACACA-238	ENST00000616352		H0Y9P7	68 aa		11.83	□□□□□ -0.52
ACACA-238	ENST00000616352	IGKV2-30	P06310	120 aa		11.83	□□□□□ -0.52
ACACA-238	ENST00000616352	SMIM20	Q8N5G0	67 aa		11.83	□□□□□ -0.52
ACACA-238	ENST00000616352	C7orf65	Q6ZTY9	151 aa		11.82	□□□□□ -0.52
ACACA-238	ENST00000616352	HRES1	P13985	223 aa		11.8	□□□□□ -0.52
ACACA-238	ENST00000616352	TRAV7	A0A075B6U4	112 aa		11.79	□□□□□ -0.52
ACACA-238	ENST00000616352	C5orf47	Q569G3	176 aa		11.79	□□□□□ -0.52
ACACA-238	ENST00000616352	LOC101927531	A0A1B0GV80	90 aa		11.75	□□□□□ -0.53
ACACA-238	ENST00000616352	MP68	P56378	58 aa		11.75	□□□□□ -0.53
ACACA-238	ENST00000616352	MPLKIP	Q8TAP9	179 aa		11.75	□□□□□ -0.53
ACACA-238	ENST00000616352	KRTAP19-2	Q3LHN2	52 aa		11.73	□□□□□ -0.53
ACACA-238	ENST00000616352	CYP4F30P	Q9H0H9	118 aa		11.72	□□□□□ -0.53
ACACA-238	ENST00000616352	C1orf64	Q8NEQ6	169 aa		11.71	□□□□□ -0.53
ACACA-238	ENST00000616352	LINC00208	Q96KT6	92 aa		11.71	□□□□□ -0.53
ACACA-238	ENST00000616352	SERP2	Q8N6R1	65 aa		11.69	□□□□□ -0.54
ACACA-238	ENST00000616352		H3BPC8	53 aa		11.68	□□□□□ -0.54
ACACA-238	ENST00000616352	FAT4	Q6V0I7	4981 aa		11.67	□□□□□ -0.54
ACACA-238	ENST00000616352	PCP4	P48539	62 aa		11.63	□□□□□ -0.55
ACACA-238	ENST00000616352	RBM12B-AS1	Q9P1G2	102 aa		11.63	□□□□□ -0.55
ACACA-238	ENST00000616352	LCE2C	Q5TA81	110 aa		11.62	□□□□□ -0.55
ACACA-238	ENST00000616352		A0A0U1RQV1	116 aa		11.6	□□□□□ -0.55
ACACA-238	ENST00000616352	FLG	P20930	4061 aa	Predicted RBP	11.57	□□□□□ -0.56
ACACA-238	ENST00000616352	C4orf26	Q17RF5	130 aa		11.57	□□□□□ -0.56
ACACA-238	ENST00000616352	KLKP1	Q107X0	134 aa		11.56	□□□□□ -0.56
ACACA-238	ENST00000616352	COX6B2	Q6YFQ2	88 aa		11.56	□□□□□ -0.56
ACACA-238	ENST00000616352	COX7C	P15954	63 aa		11.54	□□□□□ -0.56
ACACA-238	ENST00000616352	FAM236D	A0A1B0GTK5	79 aa		11.53	□□□□□ -0.56
ACACA-238	ENST00000616352	FAM236C	P0DP71	79 aa		11.53	□□□□□ -0.56
ACACA-238	ENST00000616352	ANAPC13	Q9BS18	74 aa		11.52	□□□□□ -0.57
ACACA-238	ENST00000616352	C20orf197	Q8N268	126 aa		11.51	□□□□□ -0.57
ACACA-238	ENST00000616352	SNURF	Q9Y675	71 aa		11.49	□□□□□ -0.57
ACACA-238	ENST00000616352	KRTAP3-1	Q9BYR8	98 aa		11.45	□□□□□ -0.58
ACACA-238	ENST00000616352	MT1H	P80294	61 aa		11.4	□□□□□ -0.58
ACACA-238	ENST00000616352	H1FX-AS1	Q4G0G2	97 aa		11.38	□□□□□ -0.59
ACACA-238	ENST00000616352	LCE2A	Q5TA79	106 aa	Predicted RBP	11.36	□□□□□ -0.59
ACACA-238	ENST00000616352	CCDC179	H3BU77	68 aa		11.3	□□□□□ -0.6
ACACA-238	ENST00000616352	CYSTM1	Q9H1C7	97 aa		11.3	□□□□□ -0.6
ACACA-238	ENST00000616352		A8MUN3	132 aa		11.28	□□□□□ -0.6
ACACA-238	ENST00000616352	DMAC1	Q96GE9	116 aa		11.25	□□□□□ -0.61
ACACA-238	ENST00000616352	NDUFC1	O43677	76 aa		11.24	□□□□□ -0.61
ACACA-238	ENST00000616352	SPANXA2-OT1	Q8N9U9	137 aa		11.24	□□□□□ -0.61
ACACA-238	ENST00000616352		H7BZZ5	65 aa		11.23	□□□□□ -0.61
ACACA-238	ENST00000616352		M0R2T5	61 aa		11.19	□□□□□ -0.62
ACACA-238	ENST00000616352		S4R3F8	94 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 143 ms