RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 C7orf65Q6ZTY9 151 aa6.18□□□□□ -1.42
GGA3-221ENST00000614198 H0Y9J4 135 aa6.17□□□□□ -1.42
GGA3-221ENST00000614198 H3BPC8 53 aa6.17□□□□□ -1.42
GGA3-221ENST00000614198 PRLHP81277 87 aa6.16□□□□□ -1.42
GGA3-221ENST00000614198 PCOTHQ58A44 107 aa6.16□□□□□ -1.42
GGA3-221ENST00000614198 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
GGA3-221ENST00000614198 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
GGA3-221ENST00000614198 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.43
GGA3-221ENST00000614198 IGLV1-50A0A075B6I6 118 aa6.14□□□□□ -1.43
GGA3-221ENST00000614198 IGLV5-52A0A0A0MRZ9 124 aa6.14□□□□□ -1.43
GGA3-221ENST00000614198 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
GGA3-221ENST00000614198 VPS13BQ7Z7G8 4022 aa6.14□□□□□ -1.43
GGA3-221ENST00000614198 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
GGA3-221ENST00000614198 C14orf177Q52M58 125 aa6.13□□□□□ -1.43
GGA3-221ENST00000614198 MOBPQ13875 183 aa6.13□□□□□ -1.43
GGA3-221ENST00000614198 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
GGA3-221ENST00000614198 SPRR1AP35321 89 aa6.12□□□□□ -1.43
GGA3-221ENST00000614198 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
GGA3-221ENST00000614198 REG3GQ6UW15 175 aa6.11□□□□□ -1.43
GGA3-221ENST00000614198 COA5Q86WW8 74 aa6.11□□□□□ -1.43
GGA3-221ENST00000614198 DYNC1H1Q14204 4646 aaKnown RBP6.11□□□□□ -1.43
GGA3-221ENST00000614198 LINC00313P59037 77 aa6.1□□□□□ -1.43
GGA3-221ENST00000614198 SPACA4Q8TDM5 124 aa6.1□□□□□ -1.43
GGA3-221ENST00000614198 PLA2G2DQ9UNK4 145 aa6.1□□□□□ -1.43
GGA3-221ENST00000614198 KRTAP10-1P60331 282 aa6.09□□□□□ -1.43
GGA3-221ENST00000614198 FAT1Q14517 4588 aa6.09□□□□□ -1.43
GGA3-221ENST00000614198 IGLV7-46A0A075B6I9 117 aa6.08□□□□□ -1.44
GGA3-221ENST00000614198 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
GGA3-221ENST00000614198 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
GGA3-221ENST00000614198 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
GGA3-221ENST00000614198 SPINK7P58062 85 aa6.07□□□□□ -1.44
GGA3-221ENST00000614198 PRR26Q8N8Z3 221 aa6.05□□□□□ -1.44
GGA3-221ENST00000614198 CIRBP-AS1Q8TBR5 109 aa6.05□□□□□ -1.44
GGA3-221ENST00000614198 EPPK1P58107 5090 aaKnown RBP6.04□□□□□ -1.44
GGA3-221ENST00000614198 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
GGA3-221ENST00000614198 ANAPC11Q9NYG5 84 aa6.04□□□□□ -1.44
GGA3-221ENST00000614198 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
GGA3-221ENST00000614198 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
GGA3-221ENST00000614198 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
GGA3-221ENST00000614198 A8MWP4 228 aa6.02□□□□□ -1.45
GGA3-221ENST00000614198 IGLV9-49A0A0B4J1Y8 123 aa6.01□□□□□ -1.45
GGA3-221ENST00000614198 CDK2AP2O75956 126 aa6□□□□□ -1.45
GGA3-221ENST00000614198 SMR3BP02814 79 aaPredicted RBP5.99□□□□□ -1.45
GGA3-221ENST00000614198 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
GGA3-221ENST00000614198 LINC00472Q9H8W2 130 aa5.98□□□□□ -1.45
GGA3-221ENST00000614198 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
GGA3-221ENST00000614198 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
GGA3-221ENST00000614198 SPINK6Q6UWN8 80 aa5.95□□□□□ -1.46
GGA3-221ENST00000614198 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
GGA3-221ENST00000614198 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
GGA3-221ENST00000614198 HRES1P13985 223 aa5.94□□□□□ -1.46
GGA3-221ENST00000614198 RETNLBQ9BQ08 111 aa5.94□□□□□ -1.46
GGA3-221ENST00000614198 Q6ZSA8 131 aa5.94□□□□□ -1.46
GGA3-221ENST00000614198 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
GGA3-221ENST00000614198 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
GGA3-221ENST00000614198 HSPG2P98160 4391 aa5.92□□□□□ -1.46
GGA3-221ENST00000614198 ASB16-AS1Q495Z4 193 aa5.92□□□□□ -1.46
GGA3-221ENST00000614198 PLA2G1BP04054 148 aaKnown RBP5.91□□□□□ -1.46
GGA3-221ENST00000614198 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
GGA3-221ENST00000614198 CSAG1Q6PB30 78 aa5.89□□□□□ -1.47
GGA3-221ENST00000614198 SPRR1BP22528 89 aa5.89□□□□□ -1.47
GGA3-221ENST00000614198 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
GGA3-221ENST00000614198 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
GGA3-221ENST00000614198 ZNF861PO60384 105 aa5.88□□□□□ -1.47
GGA3-221ENST00000614198 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
GGA3-221ENST00000614198 MYCBP2O75592 4640 aa5.87□□□□□ -1.47
GGA3-221ENST00000614198 A0A087X002 238 aa5.86□□□□□ -1.47
GGA3-221ENST00000614198 Q96NJ1 140 aa5.83□□□□□ -1.48
GGA3-221ENST00000614198 MRPL34Q9BQ48 92 aaKnown RBP5.83□□□□□ -1.48
GGA3-221ENST00000614198 FLG2Q5D862 2391 aaPredicted RBP5.83□□□□□ -1.48
GGA3-221ENST00000614198 PKHD1L1Q86WI1 4243 aa5.82□□□□□ -1.48
GGA3-221ENST00000614198 RYR1P21817 5038 aa5.82□□□□□ -1.48
GGA3-221ENST00000614198 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
GGA3-221ENST00000614198 A0A1B0GU69 56 aa5.8□□□□□ -1.48
GGA3-221ENST00000614198 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
GGA3-221ENST00000614198 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
GGA3-221ENST00000614198 ACYP2P14621 99 aa5.78□□□□□ -1.48
GGA3-221ENST00000614198 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
GGA3-221ENST00000614198 LINC00483Q53H64 154 aa5.77□□□□□ -1.49
GGA3-221ENST00000614198 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
GGA3-221ENST00000614198 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
GGA3-221ENST00000614198 Q5W150 140 aa5.74□□□□□ -1.49
GGA3-221ENST00000614198 SPINK1P00995 79 aa5.73□□□□□ -1.49
GGA3-221ENST00000614198 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
GGA3-221ENST00000614198 MIR22HGQ0VDD5 57 aa5.73□□□□□ -1.49
GGA3-221ENST00000614198 DMAC1Q96GE9 116 aa5.71□□□□□ -1.49
GGA3-221ENST00000614198 UQCR11O14957 56 aa5.7□□□□□ -1.5
GGA3-221ENST00000614198 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
GGA3-221ENST00000614198 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
GGA3-221ENST00000614198 TNXBP22105 4242 aa5.7□□□□□ -1.5
GGA3-221ENST00000614198 Q5VSD8 79 aa5.69□□□□□ -1.5
GGA3-221ENST00000614198 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
GGA3-221ENST00000614198 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
GGA3-221ENST00000614198 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
GGA3-221ENST00000614198 ABCA13Q86UQ4 5058 aa5.67□□□□□ -1.5
GGA3-221ENST00000614198 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
GGA3-221ENST00000614198 TYMSOSQ8TAI1 123 aa5.65□□□□□ -1.51
GGA3-221ENST00000614198 ROMO1P60602 79 aa5.62□□□□□ -1.51
GGA3-221ENST00000614198 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
GGA3-221ENST00000614198 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms