RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 K7EQZ3 153 aa9.88□□□□□ -0.83
SREK1-216ENST00000612404 NDUFB1O75438 58 aa9.88□□□□□ -0.83
SREK1-216ENST00000612404 HIST1H4AP62805 103 aaKnown RBP9.88□□□□□ -0.83
SREK1-216ENST00000612404 IGHV6-1A0A0B4J1U7 121 aa9.84□□□□□ -0.83
SREK1-216ENST00000612404 PRR15Q8IV56 129 aa9.84□□□□□ -0.83
SREK1-216ENST00000612404 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
SREK1-216ENST00000612404 A0A087WVE0 104 aa9.8□□□□□ -0.84
SREK1-216ENST00000612404 IMUPQ9GZP8 106 aa9.79□□□□□ -0.84
SREK1-216ENST00000612404 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
SREK1-216ENST00000612404 PRR4Q16378 134 aa9.77□□□□□ -0.84
SREK1-216ENST00000612404 NOTCH2NLQ7Z3S9 236 aa9.76□□□□□ -0.85
SREK1-216ENST00000612404 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
SREK1-216ENST00000612404 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
SREK1-216ENST00000612404 HERC1Q15751 4861 aa9.75□□□□□ -0.85
SREK1-216ENST00000612404 LINC00313P59037 77 aa9.74□□□□□ -0.85
SREK1-216ENST00000612404 ANAPC13Q9BS18 74 aa9.74□□□□□ -0.85
SREK1-216ENST00000612404 HCG22E2RYF7 251 aa9.73□□□□□ -0.85
SREK1-216ENST00000612404 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
SREK1-216ENST00000612404 MMP24-AS1A0A0U1RRL7 71 aa9.72□□□□□ -0.85
SREK1-216ENST00000612404 C9orf92A6NGG3 77 aa9.72□□□□□ -0.85
SREK1-216ENST00000612404 C8orf87E5RJ46 101 aa9.72□□□□□ -0.85
SREK1-216ENST00000612404 CASC2Q6XLA1 102 aa9.7□□□□□ -0.86
SREK1-216ENST00000612404 hDV103S1A0JD37 113 aa9.69□□□□□ -0.86
SREK1-216ENST00000612404 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
SREK1-216ENST00000612404 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
SREK1-216ENST00000612404 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
SREK1-216ENST00000612404 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
SREK1-216ENST00000612404 MRPL34Q9BQ48 92 aaKnown RBP9.62□□□□□ -0.87
SREK1-216ENST00000612404 KRTAP16-1A8MUX0 517 aa9.61□□□□□ -0.87
SREK1-216ENST00000612404 NDUFS5O43920 106 aa9.59□□□□□ -0.87
SREK1-216ENST00000612404 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
SREK1-216ENST00000612404 LPAP08519 4548 aa9.57□□□□□ -0.88
SREK1-216ENST00000612404 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
SREK1-216ENST00000612404 CCDC179H3BU77 68 aa9.54□□□□□ -0.88
SREK1-216ENST00000612404 Q8N9P0 234 aaPredicted RBP9.54□□□□□ -0.88
SREK1-216ENST00000612404 XP32Q5T750 250 aa9.53□□□□□ -0.88
SREK1-216ENST00000612404 ATOX1O00244 68 aa9.52□□□□□ -0.89
SREK1-216ENST00000612404 C20orf166-AS1Q96NR2 134 aa9.5□□□□□ -0.89
SREK1-216ENST00000612404 A8MUU9 505 aa9.49□□□□□ -0.89
SREK1-216ENST00000612404 LRP2P98164 4655 aa9.48□□□□□ -0.89
SREK1-216ENST00000612404 OCR1Q9BZK8 76 aa9.47□□□□□ -0.89
SREK1-216ENST00000612404 TP53AIP1Q9HCN2 124 aa9.47□□□□□ -0.89
SREK1-216ENST00000612404 Q75L30 129 aa9.46□□□□□ -0.89
SREK1-216ENST00000612404 SMIM20Q8N5G0 67 aa9.46□□□□□ -0.9
SREK1-216ENST00000612404 UQCRQO14949 82 aa9.43□□□□□ -0.9
SREK1-216ENST00000612404 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
SREK1-216ENST00000612404 RPL37P61927 97 aaKnown RBP9.43□□□□□ -0.9
SREK1-216ENST00000612404 COX7CP15954 63 aa9.4□□□□□ -0.91
SREK1-216ENST00000612404 Q5W150 140 aa9.39□□□□□ -0.91
SREK1-216ENST00000612404 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
SREK1-216ENST00000612404 SERP2Q8N6R1 65 aa9.39□□□□□ -0.91
SREK1-216ENST00000612404 ZCCHC13Q8WW36 166 aaKnown RBP9.39□□□□□ -0.91
SREK1-216ENST00000612404 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
SREK1-216ENST00000612404 H0Y9P7 68 aa9.35□□□□□ -0.91
SREK1-216ENST00000612404 C5orf47Q569G3 176 aa9.34□□□□□ -0.91
SREK1-216ENST00000612404 MP68P56378 58 aa9.32□□□□□ -0.92
SREK1-216ENST00000612404 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
SREK1-216ENST00000612404 SEC61BP60468 96 aaKnown RBP9.28□□□□□ -0.92
SREK1-216ENST00000612404 LINC00208Q96KT6 92 aa9.28□□□□□ -0.92
SREK1-216ENST00000612404 C20orf197Q8N268 126 aa9.25□□□□□ -0.93
SREK1-216ENST00000612404 C1orf64Q8NEQ6 169 aa9.25□□□□□ -0.93
SREK1-216ENST00000612404 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
SREK1-216ENST00000612404 IGKV2-30P06310 120 aa9.25□□□□□ -0.93
SREK1-216ENST00000612404 SNURFQ9Y675 71 aa9.23□□□□□ -0.93
SREK1-216ENST00000612404 H3BPC8 53 aa9.22□□□□□ -0.93
SREK1-216ENST00000612404 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
SREK1-216ENST00000612404 A0A0U1RQV1 116 aa9.2□□□□□ -0.94
SREK1-216ENST00000612404 MUC17Q685J3 4493 aa9.19□□□□□ -0.94
SREK1-216ENST00000612404 SPINK7P58062 85 aa9.19□□□□□ -0.94
SREK1-216ENST00000612404 C7orf65Q6ZTY9 151 aa9.19□□□□□ -0.94
SREK1-216ENST00000612404 TMEM258P61165 79 aa9.17□□□□□ -0.94
SREK1-216ENST00000612404 CYP4F30PQ9H0H9 118 aa9.17□□□□□ -0.94
SREK1-216ENST00000612404 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
SREK1-216ENST00000612404 CYSTM1Q9H1C7 97 aa9.16□□□□□ -0.94
SREK1-216ENST00000612404 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
SREK1-216ENST00000612404 RPS28P62857 69 aaKnown RBP9.13□□□□□ -0.95
SREK1-216ENST00000612404 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
SREK1-216ENST00000612404 MUC2Q02817 5179 aa9.08□□□□□ -0.96
SREK1-216ENST00000612404 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
SREK1-216ENST00000612404 SVIPQ8NHG7 77 aa9.03□□□□□ -0.96
SREK1-216ENST00000612404 NDUFC1O43677 76 aa9.02□□□□□ -0.96
SREK1-216ENST00000612404 HRES1P13985 223 aa9.02□□□□□ -0.96
SREK1-216ENST00000612404 H7BZZ5 65 aa9.01□□□□□ -0.97
SREK1-216ENST00000612404 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
SREK1-216ENST00000612404 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.98
SREK1-216ENST00000612404 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
SREK1-216ENST00000612404 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
SREK1-216ENST00000612404 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
SREK1-216ENST00000612404 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
SREK1-216ENST00000612404 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
SREK1-216ENST00000612404 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
SREK1-216ENST00000612404 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
SREK1-216ENST00000612404 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
SREK1-216ENST00000612404 DMAC1Q96GE9 116 aa8.82□□□□□ -1
SREK1-216ENST00000612404 A8MUN3 132 aa8.8□□□□□ -1
SREK1-216ENST00000612404 ACYP2P14621 99 aa8.77□□□□□ -1.01
SREK1-216ENST00000612404 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
SREK1-216ENST00000612404 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
SREK1-216ENST00000612404 SMIM26A0A096LP01 95 aa8.72□□□□□ -1.01
SREK1-216ENST00000612404 FAT4Q6V0I7 4981 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms