RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PRR15Q8IV56 129 aa9.23□□□□□ -0.93
PMF1-206ENST00000606952 IMUPQ9GZP8 106 aa9.23□□□□□ -0.93
PMF1-206ENST00000606952 NDUFB1O75438 58 aa9.22□□□□□ -0.93
PMF1-206ENST00000606952 RETNLBQ9BQ08 111 aa9.21□□□□□ -0.94
PMF1-206ENST00000606952 C8orf87E5RJ46 101 aa9.18□□□□□ -0.94
PMF1-206ENST00000606952 Q8N9L7 120 aa9.18□□□□□ -0.94
PMF1-206ENST00000606952 IGHV6-1A0A0B4J1U7 121 aa9.14□□□□□ -0.95
PMF1-206ENST00000606952 MMP24-AS1A0A0U1RRL7 71 aa9.14□□□□□ -0.95
PMF1-206ENST00000606952 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
PMF1-206ENST00000606952 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
PMF1-206ENST00000606952 HIST1H4AP62805 103 aaKnown RBP9.12□□□□□ -0.95
PMF1-206ENST00000606952 HERC1Q15751 4861 aa9.11□□□□□ -0.95
PMF1-206ENST00000606952 HCG22E2RYF7 251 aa9.1□□□□□ -0.95
PMF1-206ENST00000606952 LINC00313P59037 77 aa9.1□□□□□ -0.95
PMF1-206ENST00000606952 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
PMF1-206ENST00000606952 A0A087WVE0 104 aa9.09□□□□□ -0.95
PMF1-206ENST00000606952 KRTAP16-1A8MUX0 517 aa9.09□□□□□ -0.95
PMF1-206ENST00000606952 KRTAP13-3Q3SY46 172 aa9.09□□□□□ -0.95
PMF1-206ENST00000606952 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
PMF1-206ENST00000606952 PRR4Q16378 134 aa9.07□□□□□ -0.96
PMF1-206ENST00000606952 TMEM254Q8TBM7 123 aa9.07□□□□□ -0.96
PMF1-206ENST00000606952 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
PMF1-206ENST00000606952 CASC2Q6XLA1 102 aa9.04□□□□□ -0.96
PMF1-206ENST00000606952 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.97
PMF1-206ENST00000606952 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
PMF1-206ENST00000606952 Q8N9P0 234 aaPredicted RBP9.01□□□□□ -0.97
PMF1-206ENST00000606952 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
PMF1-206ENST00000606952 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
PMF1-206ENST00000606952 C9orf92A6NGG3 77 aa8.99□□□□□ -0.97
PMF1-206ENST00000606952 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
PMF1-206ENST00000606952 A8MUU9 505 aa8.98□□□□□ -0.97
PMF1-206ENST00000606952 HMCN2Q8NDA2 5059 aa8.97□□□□□ -0.97
PMF1-206ENST00000606952 SCGB1A1P11684 91 aa8.96□□□□□ -0.98
PMF1-206ENST00000606952 XP32Q5T750 250 aa8.96□□□□□ -0.98
PMF1-206ENST00000606952 Q75L30 129 aa8.94□□□□□ -0.98
PMF1-206ENST00000606952 ATOX1O00244 68 aa8.91□□□□□ -0.98
PMF1-206ENST00000606952 OCR1Q9BZK8 76 aa8.91□□□□□ -0.98
PMF1-206ENST00000606952 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
PMF1-206ENST00000606952 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
PMF1-206ENST00000606952 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
PMF1-206ENST00000606952 LPAP08519 4548 aa8.87□□□□□ -0.99
PMF1-206ENST00000606952 UQCRQO14949 82 aa8.85□□□□□ -0.99
PMF1-206ENST00000606952 NDUFS5O43920 106 aa8.84□□□□□ -0.99
PMF1-206ENST00000606952 TRAV7A0A075B6U4 112 aa8.82□□□□□ -1
PMF1-206ENST00000606952 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
PMF1-206ENST00000606952 Q5W150 140 aa8.79□□□□□ -1
PMF1-206ENST00000606952 SERP2Q8N6R1 65 aa8.78□□□□□ -1
PMF1-206ENST00000606952 LRP2P98164 4655 aa8.78□□□□□ -1
PMF1-206ENST00000606952 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
PMF1-206ENST00000606952 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
PMF1-206ENST00000606952 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
PMF1-206ENST00000606952 SEC61BP60468 96 aaKnown RBP8.73□□□□□ -1.01
PMF1-206ENST00000606952 H3BPC8 53 aa8.72□□□□□ -1.01
PMF1-206ENST00000606952 ANAPC13Q9BS18 74 aa8.72□□□□□ -1.01
PMF1-206ENST00000606952 H0Y9P7 68 aa8.71□□□□□ -1.02
PMF1-206ENST00000606952 COX7CP15954 63 aa8.71□□□□□ -1.02
PMF1-206ENST00000606952 PCOTHQ58A44 107 aa8.69□□□□□ -1.02
PMF1-206ENST00000606952 MP68P56378 58 aa8.68□□□□□ -1.02
PMF1-206ENST00000606952 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
PMF1-206ENST00000606952 IGKV2-30P06310 120 aa8.66□□□□□ -1.02
PMF1-206ENST00000606952 A0A0U1RQV1 116 aa8.64□□□□□ -1.03
PMF1-206ENST00000606952 MUC17Q685J3 4493 aa8.64□□□□□ -1.03
PMF1-206ENST00000606952 C7orf65Q6ZTY9 151 aa8.62□□□□□ -1.03
PMF1-206ENST00000606952 LINC00208Q96KT6 92 aa8.62□□□□□ -1.03
PMF1-206ENST00000606952 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
PMF1-206ENST00000606952 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
PMF1-206ENST00000606952 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
PMF1-206ENST00000606952 SPINK7P58062 85 aa8.58□□□□□ -1.04
PMF1-206ENST00000606952 C20orf197Q8N268 126 aa8.58□□□□□ -1.04
PMF1-206ENST00000606952 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
PMF1-206ENST00000606952 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
PMF1-206ENST00000606952 KRTAP4-1Q9BYQ7 146 aa8.54□□□□□ -1.04
PMF1-206ENST00000606952 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
PMF1-206ENST00000606952 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
PMF1-206ENST00000606952 HRES1P13985 223 aa8.51□□□□□ -1.05
PMF1-206ENST00000606952 PCP4P48539 62 aa8.48□□□□□ -1.05
PMF1-206ENST00000606952 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
PMF1-206ENST00000606952 NDUFC1O43677 76 aa8.47□□□□□ -1.05
PMF1-206ENST00000606952 RNF213Q63HN8 5207 aa8.46□□□□□ -1.06
PMF1-206ENST00000606952 CYSTM1Q9H1C7 97 aa8.46□□□□□ -1.06
PMF1-206ENST00000606952 H7BZZ5 65 aa8.43□□□□□ -1.06
PMF1-206ENST00000606952 SPANXA2-OT1Q8N9U9 137 aa8.41□□□□□ -1.06
PMF1-206ENST00000606952 C4orf26Q17RF5 130 aa8.36□□□□□ -1.07
PMF1-206ENST00000606952 KRTAP19-2Q3LHN2 52 aa8.36□□□□□ -1.07
PMF1-206ENST00000606952 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
PMF1-206ENST00000606952 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
PMF1-206ENST00000606952 MUC2Q02817 5179 aa8.34□□□□□ -1.07
PMF1-206ENST00000606952 A8MUN3 132 aa8.32□□□□□ -1.08
PMF1-206ENST00000606952 KRTAP3-1Q9BYR8 98 aa8.32□□□□□ -1.08
PMF1-206ENST00000606952 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
PMF1-206ENST00000606952 TMEM258P61165 79 aa8.29□□□□□ -1.08
PMF1-206ENST00000606952 ATP5EP56381 51 aaPredicted RBP8.26□□□□□ -1.09
PMF1-206ENST00000606952 FAM236DA0A1B0GTK5 79 aa8.22□□□□□ -1.09
PMF1-206ENST00000606952 FAM236CP0DP71 79 aa8.22□□□□□ -1.09
PMF1-206ENST00000606952 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
PMF1-206ENST00000606952 LCE2CQ5TA81 110 aa8.22□□□□□ -1.09
PMF1-206ENST00000606952 ACYP2P14621 99 aa8.19□□□□□ -1.1
PMF1-206ENST00000606952 FAT4Q6V0I7 4981 aa8.12□□□□□ -1.11
PMF1-206ENST00000606952 COA5Q86WW8 74 aa8.08□□□□□ -1.12
PMF1-206ENST00000606952 S4R3F8 94 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms