RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 A0A1B0GVX0 72 aa11.25□□□□□ -0.61
PNKP-215ENST00000600910 NDUFB1O75438 58 aa11.25□□□□□ -0.61
PNKP-215ENST00000600910 IGKV3D-7A0A0C4DH55 119 aa11.24□□□□□ -0.61
PNKP-215ENST00000600910 K7ERU9 68 aa11.24□□□□□ -0.61
PNKP-215ENST00000600910 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
PNKP-215ENST00000600910 K7EQZ3 153 aa11.21□□□□□ -0.61
PNKP-215ENST00000600910 LRP2P98164 4655 aa11.21□□□□□ -0.61
PNKP-215ENST00000600910 PRR15Q8IV56 129 aa11.2□□□□□ -0.62
PNKP-215ENST00000600910 NOTCH2NLQ7Z3S9 236 aa11.2□□□□□ -0.62
PNKP-215ENST00000600910 LINC00313P59037 77 aa11.19□□□□□ -0.62
PNKP-215ENST00000600910 CXCL6P80162 114 aa11.19□□□□□ -0.62
PNKP-215ENST00000600910 Q8N9L7 120 aa11.19□□□□□ -0.62
PNKP-215ENST00000600910 XP32Q5T750 250 aa11.17□□□□□ -0.62
PNKP-215ENST00000600910 C8orf87E5RJ46 101 aa11.16□□□□□ -0.62
PNKP-215ENST00000600910 LINC00643Q86TS7 51 aa11.16□□□□□ -0.62
PNKP-215ENST00000600910 ATP5EP2Q5VTU8 51 aa11.13□□□□□ -0.63
PNKP-215ENST00000600910 C8orf17Q9NRJ1 99 aa11.13□□□□□ -0.63
PNKP-215ENST00000600910 KRTAP16-1A8MUX0 517 aa11.09□□□□□ -0.63
PNKP-215ENST00000600910 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
PNKP-215ENST00000600910 hDV103S1A0JD37 113 aa11.02□□□□□ -0.64
PNKP-215ENST00000600910 HIST1H4AP62805 103 aaKnown RBP11.02□□□□□ -0.64
PNKP-215ENST00000600910 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.64
PNKP-215ENST00000600910 RPL37P61927 97 aaKnown RBP11.02□□□□□ -0.65
PNKP-215ENST00000600910 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
PNKP-215ENST00000600910 Q75L30 129 aa11.01□□□□□ -0.65
PNKP-215ENST00000600910 A8MUU9 505 aa11□□□□□ -0.65
PNKP-215ENST00000600910 HCG22E2RYF7 251 aa11□□□□□ -0.65
PNKP-215ENST00000600910 CASC2Q6XLA1 102 aa11□□□□□ -0.65
PNKP-215ENST00000600910 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
PNKP-215ENST00000600910 MRPL34Q9BQ48 92 aaKnown RBP10.98□□□□□ -0.65
PNKP-215ENST00000600910 Q8N9P0 234 aaPredicted RBP10.96□□□□□ -0.65
PNKP-215ENST00000600910 A0A087WVE0 104 aa10.94□□□□□ -0.66
PNKP-215ENST00000600910 MT-ATP8P03928 68 aa10.94□□□□□ -0.66
PNKP-215ENST00000600910 UBR4Q5T4S7 5183 aa10.93□□□□□ -0.66
PNKP-215ENST00000600910 SEC61BP60468 96 aaKnown RBP10.93□□□□□ -0.66
PNKP-215ENST00000600910 MUC17Q685J3 4493 aa10.91□□□□□ -0.66
PNKP-215ENST00000600910 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
PNKP-215ENST00000600910 NDUFS5O43920 106 aa10.9□□□□□ -0.66
PNKP-215ENST00000600910 ATP11AUNQ6ZP68 121 aa10.9□□□□□ -0.66
PNKP-215ENST00000600910 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
PNKP-215ENST00000600910 ZCCHC13Q8WW36 166 aaKnown RBP10.81□□□□□ -0.68
PNKP-215ENST00000600910 KRTAP4-1Q9BYQ7 146 aa10.74□□□□□ -0.69
PNKP-215ENST00000600910 TP53AIP1Q9HCN2 124 aa10.73□□□□□ -0.69
PNKP-215ENST00000600910 Q5W150 140 aa10.73□□□□□ -0.69
PNKP-215ENST00000600910 RNF213Q63HN8 5207 aa10.72□□□□□ -0.69
PNKP-215ENST00000600910 MUC2Q02817 5179 aa10.72□□□□□ -0.69
PNKP-215ENST00000600910 FAM236AA0A1B0GUQ0 79 aa10.68□□□□□ -0.7
PNKP-215ENST00000600910 FAM236BA0A1B0GV22 79 aa10.68□□□□□ -0.7
PNKP-215ENST00000600910 SCGB1A1P11684 91 aa10.68□□□□□ -0.7
PNKP-215ENST00000600910 OCR1Q9BZK8 76 aa10.64□□□□□ -0.71
PNKP-215ENST00000600910 UQCRQO14949 82 aa10.62□□□□□ -0.71
PNKP-215ENST00000600910 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
PNKP-215ENST00000600910 SPINK7P58062 85 aa10.59□□□□□ -0.71
PNKP-215ENST00000600910 IGKV2D-30A0A075B6S6 120 aa10.55□□□□□ -0.72
PNKP-215ENST00000600910 IGKV2-30P06310 120 aa10.55□□□□□ -0.72
PNKP-215ENST00000600910 H0Y9P7 68 aa10.54□□□□□ -0.72
PNKP-215ENST00000600910 C7orf65Q6ZTY9 151 aa10.53□□□□□ -0.72
PNKP-215ENST00000600910 ATOX1O00244 68 aa10.52□□□□□ -0.73
PNKP-215ENST00000600910 SMIM20Q8N5G0 67 aa10.51□□□□□ -0.73
PNKP-215ENST00000600910 TRAV7A0A075B6U4 112 aa10.48□□□□□ -0.73
PNKP-215ENST00000600910 HRES1P13985 223 aa10.48□□□□□ -0.73
PNKP-215ENST00000600910 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
PNKP-215ENST00000600910 MP68P56378 58 aa10.46□□□□□ -0.74
PNKP-215ENST00000600910 LOC101927531A0A1B0GV80 90 aa10.44□□□□□ -0.74
PNKP-215ENST00000600910 LINC00208Q96KT6 92 aa10.44□□□□□ -0.74
PNKP-215ENST00000600910 PCP4P48539 62 aa10.43□□□□□ -0.74
PNKP-215ENST00000600910 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
PNKP-215ENST00000600910 CYP4F30PQ9H0H9 118 aa10.42□□□□□ -0.74
PNKP-215ENST00000600910 MPLKIPQ8TAP9 179 aa10.4□□□□□ -0.74
PNKP-215ENST00000600910 KRTAP19-2Q3LHN2 52 aa10.4□□□□□ -0.75
PNKP-215ENST00000600910 SERP2Q8N6R1 65 aa10.38□□□□□ -0.75
PNKP-215ENST00000600910 RBM12B-AS1Q9P1G2 102 aa10.38□□□□□ -0.75
PNKP-215ENST00000600910 H3BPC8 53 aa10.37□□□□□ -0.75
PNKP-215ENST00000600910 A0A0U1RQV1 116 aa10.36□□□□□ -0.75
PNKP-215ENST00000600910 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
PNKP-215ENST00000600910 COX6B2Q6YFQ2 88 aa10.34□□□□□ -0.75
PNKP-215ENST00000600910 FAM236DA0A1B0GTK5 79 aa10.32□□□□□ -0.76
PNKP-215ENST00000600910 FAM236CP0DP71 79 aa10.32□□□□□ -0.76
PNKP-215ENST00000600910 LCE2CQ5TA81 110 aa10.32□□□□□ -0.76
PNKP-215ENST00000600910 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
PNKP-215ENST00000600910 ANAPC13Q9BS18 74 aa10.3□□□□□ -0.76
PNKP-215ENST00000600910 KLKP1Q107X0 134 aa10.28□□□□□ -0.76
PNKP-215ENST00000600910 COX7CP15954 63 aa10.25□□□□□ -0.77
PNKP-215ENST00000600910 C20orf197Q8N268 126 aa10.25□□□□□ -0.77
PNKP-215ENST00000600910 SNURFQ9Y675 71 aa10.24□□□□□ -0.77
PNKP-215ENST00000600910 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
PNKP-215ENST00000600910 MT1HP80294 61 aa10.15□□□□□ -0.78
PNKP-215ENST00000600910 FLGP20930 4061 aaPredicted RBP10.15□□□□□ -0.78
PNKP-215ENST00000600910 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
PNKP-215ENST00000600910 CCDC179H3BU77 68 aa10.11□□□□□ -0.79
PNKP-215ENST00000600910 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
PNKP-215ENST00000600910 M0R2T5 61 aa10.03□□□□□ -0.8
PNKP-215ENST00000600910 A8MUN3 132 aa10.02□□□□□ -0.81
PNKP-215ENST00000600910 CYSTM1Q9H1C7 97 aa10.02□□□□□ -0.81
PNKP-215ENST00000600910 NDUFC1O43677 76 aa9.98□□□□□ -0.81
PNKP-215ENST00000600910 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
PNKP-215ENST00000600910 SPANXA2-OT1Q8N9U9 137 aa9.96□□□□□ -0.82
PNKP-215ENST00000600910 S4R3F8 94 aa9.96□□□□□ -0.82
PNKP-215ENST00000600910 H7BZZ5 65 aa9.95□□□□□ -0.82
PNKP-215ENST00000600910 LCA10Q71F78 164 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms