RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 BVES-AS1Q5T3Y7 98 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 C1orf195Q5TG92 126 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 Q6JHZ5 121 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 Q6ZQY7 126 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 DEFB105AQ8NG35 78 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 KRTAP4-1Q9BYQ7 146 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 HIGD1BQ9P298 99 aa1.8□□□□□ -2.12
CKS1BP3-201ENST00000600888 A0A0B4J2C4 111 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 A0A1B0GX51 115 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 F8WEM9 126 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 H0YGX0 51 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 TCL1BO95988 128 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 OCIAD2Q56VL3 154 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 HRCT1Q6UXD1 115 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 CLEC2BQ92478 149 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 V9GYY9 64 aa1.79□□□□□ -2.12
CKS1BP3-201ENST00000600888 TRBV7-7A0A0K0K1E9 115 aa1.78□□□□□ -2.12
CKS1BP3-201ENST00000600888 KRTAP19-2Q3LHN2 52 aa1.78□□□□□ -2.12
CKS1BP3-201ENST00000600888 Q6Q795 121 aa1.78□□□□□ -2.12
CKS1BP3-201ENST00000600888 NEBP20929 6669 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 A0A0G2JQZ4 141 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 C9orf92A6NGG3 77 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 SNCGO76070 127 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 RPL37P61927 97 aaKnown RBP1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 SPATA45Q537H7 98 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 PCOTHQ58A44 107 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 C2orf91Q6ZV80 131 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 C14orf144Q96I85 54 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 VAMP8Q9BV40 100 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 SNHG12Q9BXW3 62 aa1.77□□□□□ -2.13
CKS1BP3-201ENST00000600888 A8MUU9 505 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 H3BQ85 93 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 BPY2O14599 106 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 PYY3Q5JQD4 70 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 TEN1Q86WV5 123 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 RAB37Q96AX2 223 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 C12orf57Q99622 126 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 SS18L2Q9UHA2 77 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 PRO1854Q9UHT4 67 aa1.76□□□□□ -2.13
CKS1BP3-201ENST00000600888 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
CKS1BP3-201ENST00000600888 LST1O00453 97 aa1.75□□□□□ -2.13
CKS1BP3-201ENST00000600888 FXYD2P54710 66 aa1.75□□□□□ -2.13
CKS1BP3-201ENST00000600888 MT1HP80294 61 aa1.75□□□□□ -2.13
CKS1BP3-201ENST00000600888 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
CKS1BP3-201ENST00000600888 TRBV7-4A0A0J9YYF1 115 aa1.74□□□□□ -2.13
CKS1BP3-201ENST00000600888 H3BMG7 143 aa1.74□□□□□ -2.13
CKS1BP3-201ENST00000600888 H3BUT2 72 aa1.74□□□□□ -2.13
CKS1BP3-201ENST00000600888 HSD52Q0P140 79 aa1.74□□□□□ -2.13
CKS1BP3-201ENST00000600888 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
CKS1BP3-201ENST00000600888 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 A0A087WSZ3 146 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 A0A1W2PNM2 257 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 TMEM256-PLSCR3K7ERE1 68 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 IGKV4-1P06312 121 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 COX6CP09669 75 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 ATP11AUNQ6ZP68 121 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 Q96NJ1 140 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 ORMDL1Q9P0S3 153 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 UQCR10Q9UDW1 63 aa1.73□□□□□ -2.13
CKS1BP3-201ENST00000600888 DNAL4O96015 105 aa1.72□□□□□ -2.13
CKS1BP3-201ENST00000600888 TRACP01848 142 aa1.72□□□□□ -2.13
CKS1BP3-201ENST00000600888 FABP2P12104 132 aa1.72□□□□□ -2.13
CKS1BP3-201ENST00000600888 ANKRD29Q8N6D5 301 aa1.72□□□□□ -2.13
CKS1BP3-201ENST00000600888 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
CKS1BP3-201ENST00000600888 PSPHP1O15172 72 aa1.71□□□□□ -2.14
CKS1BP3-201ENST00000600888 PSMB2P49721 201 aa1.71□□□□□ -2.14
CKS1BP3-201ENST00000600888 LINC00472Q9H8W2 130 aa1.71□□□□□ -2.14
CKS1BP3-201ENST00000600888 A0A1B0GW54 56 aa1.7□□□□□ -2.14
CKS1BP3-201ENST00000600888 K7ERJ3 54 aa1.7□□□□□ -2.14
CKS1BP3-201ENST00000600888 CCKP06307 115 aa1.7□□□□□ -2.14
CKS1BP3-201ENST00000600888 LINC00313P59037 77 aa1.7□□□□□ -2.14
CKS1BP3-201ENST00000600888 RBM3P98179 157 aaKnown RBP1.7□□□□□ -2.14
CKS1BP3-201ENST00000600888 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
CKS1BP3-201ENST00000600888 C8orf87E5RJ46 101 aa1.69□□□□□ -2.14
CKS1BP3-201ENST00000600888 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
CKS1BP3-201ENST00000600888 DSCR8Q96T75 97 aa1.69□□□□□ -2.14
CKS1BP3-201ENST00000600888 C8orf17Q9NRJ1 99 aa1.69□□□□□ -2.14
CKS1BP3-201ENST00000600888 FLGP20930 4061 aaPredicted RBP1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 TRBV20-1A0A075B6N2 111 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 FAM240AA0A1B0GVK7 77 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 C9JAW5 83 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 J3KT08 172 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 M0R143 59 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 M0R2T5 61 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 BAALC-AS2P0C853 105 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 SCGB1C2P0DMR2 95 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 PDE6GP18545 87 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 Q6ZQT0 140 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 SIGMAR1Q99720 223 aa1.68□□□□□ -2.14
CKS1BP3-201ENST00000600888 LOC110117498A0A087WWA1 95 aa1.67□□□□□ -2.14
CKS1BP3-201ENST00000600888 IGHV6-1A0A0B4J1U7 121 aa1.67□□□□□ -2.14
CKS1BP3-201ENST00000600888 SMIM6P0DI80 62 aa1.67□□□□□ -2.14
CKS1BP3-201ENST00000600888 ATXN8Q156A1 80 aa1.67□□□□□ -2.14
CKS1BP3-201ENST00000600888 A0A1B0GV72 72 aa1.66□□□□□ -2.14
CKS1BP3-201ENST00000600888 NDUFB1O75438 58 aa1.66□□□□□ -2.14
CKS1BP3-201ENST00000600888 HRES1P13985 223 aa1.66□□□□□ -2.14
CKS1BP3-201ENST00000600888 LYRM7Q5U5X0 104 aa1.66□□□□□ -2.14
CKS1BP3-201ENST00000600888 VPS25Q9BRG1 176 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms