RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 TRAV22A0A0B4J277 110 aa12.61□□□□□ -0.39
GRAMD1A-212ENST00000600231 Q5XG85 94 aa12.6□□□□□ -0.39
GRAMD1A-212ENST00000600231 H3BPC8 53 aa12.58□□□□□ -0.4
GRAMD1A-212ENST00000600231 KRTAP1-4P0C5Y4 121 aa12.58□□□□□ -0.4
GRAMD1A-212ENST00000600231 FAM229BQ4G0N7 80 aa12.57□□□□□ -0.4
GRAMD1A-212ENST00000600231 C1orf64Q8NEQ6 169 aa12.56□□□□□ -0.4
GRAMD1A-212ENST00000600231 MRPL34Q9BQ48 92 aaKnown RBP12.55□□□□□ -0.4
GRAMD1A-212ENST00000600231 TP53AIP1Q9HCN2 124 aa12.55□□□□□ -0.4
GRAMD1A-212ENST00000600231 PRR4Q16378 134 aa12.55□□□□□ -0.4
GRAMD1A-212ENST00000600231 NDUFS5O43920 106 aa12.54□□□□□ -0.4
GRAMD1A-212ENST00000600231 SMIM26A0A096LP01 95 aa12.53□□□□□ -0.4
GRAMD1A-212ENST00000600231 C4orf26Q17RF5 130 aa12.53□□□□□ -0.4
GRAMD1A-212ENST00000600231 FP248Q71RG6 208 aaPredicted RBP12.52□□□□□ -0.41
GRAMD1A-212ENST00000600231 LINC00336Q6ZUF6 198 aa12.48□□□□□ -0.41
GRAMD1A-212ENST00000600231 PLA2G1BP04054 148 aaKnown RBP12.48□□□□□ -0.41
GRAMD1A-212ENST00000600231 CYP4F30PQ9H0H9 118 aa12.48□□□□□ -0.41
GRAMD1A-212ENST00000600231 C1orf195Q5TG92 126 aa12.45□□□□□ -0.42
GRAMD1A-212ENST00000600231 DYNC1H1Q14204 4646 aaKnown RBP12.45□□□□□ -0.42
GRAMD1A-212ENST00000600231 SPANXA2-OT1Q8N9U9 137 aa12.42□□□□□ -0.42
GRAMD1A-212ENST00000600231 A0A1B0GVY2 172 aa12.41□□□□□ -0.42
GRAMD1A-212ENST00000600231 SMR3BP02814 79 aaPredicted RBP12.4□□□□□ -0.42
GRAMD1A-212ENST00000600231 C8orf87E5RJ46 101 aa12.39□□□□□ -0.43
GRAMD1A-212ENST00000600231 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
GRAMD1A-212ENST00000600231 PCOTHQ58A44 107 aa12.38□□□□□ -0.43
GRAMD1A-212ENST00000600231 LINC00313P59037 77 aa12.36□□□□□ -0.43
GRAMD1A-212ENST00000600231 Q5W150 140 aa12.36□□□□□ -0.43
GRAMD1A-212ENST00000600231 LIMD2Q9BT23 127 aa12.36□□□□□ -0.43
GRAMD1A-212ENST00000600231 MPLKIPQ8TAP9 179 aa12.35□□□□□ -0.43
GRAMD1A-212ENST00000600231 C4orf48Q5BLP8 95 aa12.34□□□□□ -0.43
GRAMD1A-212ENST00000600231 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
GRAMD1A-212ENST00000600231 FAT1Q14517 4588 aa12.31□□□□□ -0.44
GRAMD1A-212ENST00000600231 RYR2Q92736 4967 aa12.31□□□□□ -0.44
GRAMD1A-212ENST00000600231 KMT2CQ8NEZ4 4911 aaKnown RBP12.3□□□□□ -0.44
GRAMD1A-212ENST00000600231 IGLV7-46A0A075B6I9 117 aa12.3□□□□□ -0.44
GRAMD1A-212ENST00000600231 KRTAP13-3Q3SY46 172 aa12.3□□□□□ -0.44
GRAMD1A-212ENST00000600231 APOBP04114 4563 aaKnown RBP12.29□□□□□ -0.44
GRAMD1A-212ENST00000600231 SPINK1P00995 79 aa12.29□□□□□ -0.44
GRAMD1A-212ENST00000600231 Q8N9P0 234 aaPredicted RBP12.26□□□□□ -0.45
GRAMD1A-212ENST00000600231 LOC101927531A0A1B0GV80 90 aa12.23□□□□□ -0.45
GRAMD1A-212ENST00000600231 KRTAP16-1A8MUX0 517 aa12.22□□□□□ -0.45
GRAMD1A-212ENST00000600231 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
GRAMD1A-212ENST00000600231 LINC00304Q8N9R0 145 aa12.21□□□□□ -0.45
GRAMD1A-212ENST00000600231 RETNLBQ9BQ08 111 aa12.18□□□□□ -0.46
GRAMD1A-212ENST00000600231 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
GRAMD1A-212ENST00000600231 Q1T7F1 81 aa12.16□□□□□ -0.46
GRAMD1A-212ENST00000600231 COA5Q86WW8 74 aa12.15□□□□□ -0.46
GRAMD1A-212ENST00000600231 SPAG11AQ6PDA7 123 aa12.13□□□□□ -0.47
GRAMD1A-212ENST00000600231 RPS29P62273 56 aaKnown RBP12.13□□□□□ -0.47
GRAMD1A-212ENST00000600231 PKHD1L1Q86WI1 4243 aa12.04□□□□□ -0.48
GRAMD1A-212ENST00000600231 PSPHP1O15172 72 aa12.04□□□□□ -0.48
GRAMD1A-212ENST00000600231 IGKV2-30P06310 120 aa12.04□□□□□ -0.48
GRAMD1A-212ENST00000600231 HRES1P13985 223 aa12.04□□□□□ -0.48
GRAMD1A-212ENST00000600231 V9GYY9 64 aa12□□□□□ -0.49
GRAMD1A-212ENST00000600231 A8MUN3 132 aa11.96□□□□□ -0.49
GRAMD1A-212ENST00000600231 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
GRAMD1A-212ENST00000600231 BRK1Q8WUW1 75 aa11.94□□□□□ -0.5
GRAMD1A-212ENST00000600231 RYR3Q15413 4870 aa11.91□□□□□ -0.5
GRAMD1A-212ENST00000600231 C9orf92A6NGG3 77 aa11.89□□□□□ -0.51
GRAMD1A-212ENST00000600231 ACYP2P14621 99 aa11.89□□□□□ -0.51
GRAMD1A-212ENST00000600231 DMAC1Q96GE9 116 aa11.89□□□□□ -0.51
GRAMD1A-212ENST00000600231 PRO0628Q9UI54 55 aa11.89□□□□□ -0.51
GRAMD1A-212ENST00000600231 FLG2Q5D862 2391 aaPredicted RBP11.88□□□□□ -0.51
GRAMD1A-212ENST00000600231 Q5VV11 94 aa11.87□□□□□ -0.51
GRAMD1A-212ENST00000600231 HSPG2P98160 4391 aa11.87□□□□□ -0.51
GRAMD1A-212ENST00000600231 PRR15LQ9BU68 103 aa11.85□□□□□ -0.51
GRAMD1A-212ENST00000600231 LRP1Q07954 4544 aaKnown RBP11.85□□□□□ -0.51
GRAMD1A-212ENST00000600231 Q5VSD8 79 aa11.82□□□□□ -0.52
GRAMD1A-212ENST00000600231 Q8N1X5 172 aa11.8□□□□□ -0.52
GRAMD1A-212ENST00000600231 C20orf166-AS1Q96NR2 134 aa11.79□□□□□ -0.52
GRAMD1A-212ENST00000600231 LINC01558Q9Y6Z2 57 aa11.79□□□□□ -0.52
GRAMD1A-212ENST00000600231 A8MUU9 505 aa11.78□□□□□ -0.52
GRAMD1A-212ENST00000600231 C7orf65Q6ZTY9 151 aa11.76□□□□□ -0.53
GRAMD1A-212ENST00000600231 TNXBP22105 4242 aa11.75□□□□□ -0.53
GRAMD1A-212ENST00000600231 CHKB-CPT1BH3BT56 60 aa11.75□□□□□ -0.53
GRAMD1A-212ENST00000600231 KRTAP10-8P60410 259 aa11.74□□□□□ -0.53
GRAMD1A-212ENST00000600231 RYR1P21817 5038 aa11.73□□□□□ -0.53
GRAMD1A-212ENST00000600231 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
GRAMD1A-212ENST00000600231 Q75L30 129 aa11.7□□□□□ -0.54
GRAMD1A-212ENST00000600231 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
GRAMD1A-212ENST00000600231 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
GRAMD1A-212ENST00000600231 KIAA1109Q2LD37 5005 aa11.65□□□□□ -0.55
GRAMD1A-212ENST00000600231 A8MU10 97 aa11.63□□□□□ -0.55
GRAMD1A-212ENST00000600231 A6NED7 52 aa11.59□□□□□ -0.55
GRAMD1A-212ENST00000600231 SPINK7P58062 85 aa11.55□□□□□ -0.56
GRAMD1A-212ENST00000600231 MYCBP2O75592 4640 aa11.54□□□□□ -0.56
GRAMD1A-212ENST00000600231 LCA10Q71F78 164 aa11.53□□□□□ -0.56
GRAMD1A-212ENST00000600231 EPPK1P58107 5090 aaKnown RBP11.48□□□□□ -0.57
GRAMD1A-212ENST00000600231 MT1HL1P0DM35 61 aa11.47□□□□□ -0.57
GRAMD1A-212ENST00000600231 A0A1B0GU69 56 aa11.46□□□□□ -0.58
GRAMD1A-212ENST00000600231 KRTAP3-1Q9BYR8 98 aa11.45□□□□□ -0.58
GRAMD1A-212ENST00000600231 CDC42SE1Q9NRR8 79 aa11.43□□□□□ -0.58
GRAMD1A-212ENST00000600231 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
GRAMD1A-212ENST00000600231 XP32Q5T750 250 aa11.37□□□□□ -0.59
GRAMD1A-212ENST00000600231 RPL37P61927 97 aaKnown RBP11.36□□□□□ -0.59
GRAMD1A-212ENST00000600231 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
GRAMD1A-212ENST00000600231 COX6B2Q6YFQ2 88 aa11.3□□□□□ -0.6
GRAMD1A-212ENST00000600231 PMAIP1Q13794 54 aa11.28□□□□□ -0.6
GRAMD1A-212ENST00000600231 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
GRAMD1A-212ENST00000600231 UQCR11O14957 56 aa11.19□□□□□ -0.62
GRAMD1A-212ENST00000600231 SEC61GP60059 68 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms