RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 HMCN2Q8NDA2 5059 aa7.16□□□□□ -1.26
ZNF548-209ENST00000598895 Q8N9L7 120 aa7.15□□□□□ -1.26
ZNF548-209ENST00000598895 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
ZNF548-209ENST00000598895 ST20-AS1Q8NBB2 130 aa7.12□□□□□ -1.27
ZNF548-209ENST00000598895 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
ZNF548-209ENST00000598895 KRTAP13-2Q52LG2 175 aa7.11□□□□□ -1.27
ZNF548-209ENST00000598895 HRCT1Q6UXD1 115 aa7.11□□□□□ -1.27
ZNF548-209ENST00000598895 IGLV8-61A0A075B6I0 122 aa7.1□□□□□ -1.27
ZNF548-209ENST00000598895 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
ZNF548-209ENST00000598895 DSCR10P59022 87 aa7.08□□□□□ -1.28
ZNF548-209ENST00000598895 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
ZNF548-209ENST00000598895 HCG22E2RYF7 251 aa7.07□□□□□ -1.28
ZNF548-209ENST00000598895 ZNF706Q9Y5V0 76 aaPredicted RBP7.06□□□□□ -1.28
ZNF548-209ENST00000598895 NDUFB1O75438 58 aa7.05□□□□□ -1.28
ZNF548-209ENST00000598895 IGFL1Q6UW32 110 aa7.05□□□□□ -1.28
ZNF548-209ENST00000598895 K7EQZ3 153 aa7.04□□□□□ -1.28
ZNF548-209ENST00000598895 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
ZNF548-209ENST00000598895 SPRR1BP22528 89 aa7.03□□□□□ -1.28
ZNF548-209ENST00000598895 LINC00304Q8N9R0 145 aa7.03□□□□□ -1.28
ZNF548-209ENST00000598895 ZCCHC13Q8WW36 166 aaKnown RBP7.03□□□□□ -1.28
ZNF548-209ENST00000598895 MP68P56378 58 aa7.02□□□□□ -1.29
ZNF548-209ENST00000598895 PRR4Q16378 134 aa7.02□□□□□ -1.29
ZNF548-209ENST00000598895 H3BPC8 53 aa7.01□□□□□ -1.29
ZNF548-209ENST00000598895 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
ZNF548-209ENST00000598895 IGLV9-49A0A0B4J1Y8 123 aa7□□□□□ -1.29
ZNF548-209ENST00000598895 RETNLBQ9BQ08 111 aa7□□□□□ -1.29
ZNF548-209ENST00000598895 A0A087WSZ3 146 aa6.99□□□□□ -1.29
ZNF548-209ENST00000598895 LINC00483Q53H64 154 aa6.99□□□□□ -1.29
ZNF548-209ENST00000598895 MOBPQ13875 183 aa6.98□□□□□ -1.29
ZNF548-209ENST00000598895 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
ZNF548-209ENST00000598895 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
ZNF548-209ENST00000598895 hDV103S1A0JD37 113 aa6.97□□□□□ -1.29
ZNF548-209ENST00000598895 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
ZNF548-209ENST00000598895 A8MWP4 228 aa6.94□□□□□ -1.3
ZNF548-209ENST00000598895 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
ZNF548-209ENST00000598895 CASC2Q6XLA1 102 aa6.93□□□□□ -1.3
ZNF548-209ENST00000598895 WFDC13Q8IUB5 93 aa6.93□□□□□ -1.3
ZNF548-209ENST00000598895 LRP2P98164 4655 aa6.92□□□□□ -1.3
ZNF548-209ENST00000598895 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
ZNF548-209ENST00000598895 V9GYY9 64 aa6.92□□□□□ -1.3
ZNF548-209ENST00000598895 LPAP08519 4548 aa6.91□□□□□ -1.3
ZNF548-209ENST00000598895 TRAV22A0A0B4J277 110 aa6.91□□□□□ -1.3
ZNF548-209ENST00000598895 Q1T7F1 81 aa6.91□□□□□ -1.3
ZNF548-209ENST00000598895 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
ZNF548-209ENST00000598895 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
ZNF548-209ENST00000598895 SSBP3-AS1Q7Z2R9 100 aa6.9□□□□□ -1.3
ZNF548-209ENST00000598895 C1orf64Q8NEQ6 169 aa6.9□□□□□ -1.3
ZNF548-209ENST00000598895 LINC00472Q9H8W2 130 aa6.9□□□□□ -1.3
ZNF548-209ENST00000598895 H0Y9P7 68 aa6.89□□□□□ -1.31
ZNF548-209ENST00000598895 A0A0G2JQZ4 141 aa6.88□□□□□ -1.31
ZNF548-209ENST00000598895 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
ZNF548-209ENST00000598895 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
ZNF548-209ENST00000598895 SPINK1P00995 79 aa6.87□□□□□ -1.31
ZNF548-209ENST00000598895 BRK1Q8WUW1 75 aa6.87□□□□□ -1.31
ZNF548-209ENST00000598895 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
ZNF548-209ENST00000598895 TP53AIP1Q9HCN2 124 aa6.85□□□□□ -1.31
ZNF548-209ENST00000598895 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
ZNF548-209ENST00000598895 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
ZNF548-209ENST00000598895 RNF213Q63HN8 5207 aa6.79□□□□□ -1.32
ZNF548-209ENST00000598895 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
ZNF548-209ENST00000598895 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
ZNF548-209ENST00000598895 ASB16-AS1Q495Z4 193 aa6.78□□□□□ -1.32
ZNF548-209ENST00000598895 LIMD2Q9BT23 127 aa6.78□□□□□ -1.32
ZNF548-209ENST00000598895 C8orf17Q9NRJ1 99 aa6.77□□□□□ -1.33
ZNF548-209ENST00000598895 Q96NJ1 140 aa6.75□□□□□ -1.33
ZNF548-209ENST00000598895 A0A1B0GVX0 72 aa6.74□□□□□ -1.33
ZNF548-209ENST00000598895 KRTAP13-3Q3SY46 172 aa6.74□□□□□ -1.33
ZNF548-209ENST00000598895 CD164Q04900 197 aa6.73□□□□□ -1.33
ZNF548-209ENST00000598895 MRPL34Q9BQ48 92 aaKnown RBP6.71□□□□□ -1.34
ZNF548-209ENST00000598895 PSPHP1O15172 72 aa6.7□□□□□ -1.34
ZNF548-209ENST00000598895 COA5Q86WW8 74 aa6.69□□□□□ -1.34
ZNF548-209ENST00000598895 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
ZNF548-209ENST00000598895 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
ZNF548-209ENST00000598895 NDUFS5O43920 106 aa6.68□□□□□ -1.34
ZNF548-209ENST00000598895 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
ZNF548-209ENST00000598895 A8MUN3 132 aa6.67□□□□□ -1.34
ZNF548-209ENST00000598895 LOC101927531A0A1B0GV80 90 aa6.66□□□□□ -1.34
ZNF548-209ENST00000598895 Q5VV11 94 aa6.66□□□□□ -1.34
ZNF548-209ENST00000598895 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
ZNF548-209ENST00000598895 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
ZNF548-209ENST00000598895 XP32Q5T750 250 aa6.64□□□□□ -1.35
ZNF548-209ENST00000598895 Q75L30 129 aa6.64□□□□□ -1.35
ZNF548-209ENST00000598895 CHKB-CPT1BH3BT56 60 aa6.63□□□□□ -1.35
ZNF548-209ENST00000598895 PCOTHQ58A44 107 aa6.63□□□□□ -1.35
ZNF548-209ENST00000598895 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
ZNF548-209ENST00000598895 LINC01558Q9Y6Z2 57 aa6.6□□□□□ -1.35
ZNF548-209ENST00000598895 MUC2Q02817 5179 aa6.58□□□□□ -1.36
ZNF548-209ENST00000598895 SEC61BP60468 96 aaKnown RBP6.58□□□□□ -1.36
ZNF548-209ENST00000598895 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
ZNF548-209ENST00000598895 A6NED7 52 aa6.56□□□□□ -1.36
ZNF548-209ENST00000598895 KRTAP4-1Q9BYQ7 146 aa6.56□□□□□ -1.36
ZNF548-209ENST00000598895 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
ZNF548-209ENST00000598895 HRES1P13985 223 aa6.54□□□□□ -1.36
ZNF548-209ENST00000598895 ACYP2P14621 99 aa6.53□□□□□ -1.36
ZNF548-209ENST00000598895 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
ZNF548-209ENST00000598895 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
ZNF548-209ENST00000598895 LINC00313P59037 77 aa6.5□□□□□ -1.37
ZNF548-209ENST00000598895 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
ZNF548-209ENST00000598895 Q5W150 140 aa6.47□□□□□ -1.37
ZNF548-209ENST00000598895 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms