RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 C9orf92A6NGG3 77 aa10.66□□□□□ -0.7
LTBP4-223ENST00000598717 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
LTBP4-223ENST00000598717 CXCL6P80162 114 aa10.65□□□□□ -0.7
LTBP4-223ENST00000598717 IGKV3D-7A0A0C4DH55 119 aa10.64□□□□□ -0.71
LTBP4-223ENST00000598717 LINC00643Q86TS7 51 aa10.64□□□□□ -0.71
LTBP4-223ENST00000598717 ATP5EP2Q5VTU8 51 aa10.63□□□□□ -0.71
LTBP4-223ENST00000598717 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
LTBP4-223ENST00000598717 K7EQZ3 153 aa10.62□□□□□ -0.71
LTBP4-223ENST00000598717 LINC00313P59037 77 aa10.62□□□□□ -0.71
LTBP4-223ENST00000598717 CDIP1Q9H305 208 aa10.62□□□□□ -0.71
LTBP4-223ENST00000598717 C8orf87E5RJ46 101 aa10.61□□□□□ -0.71
LTBP4-223ENST00000598717 Q8N9L7 120 aa10.6□□□□□ -0.71
LTBP4-223ENST00000598717 HMCN2Q8NDA2 5059 aa10.57□□□□□ -0.72
LTBP4-223ENST00000598717 NOTCH2NLQ7Z3S9 236 aa10.56□□□□□ -0.72
LTBP4-223ENST00000598717 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
LTBP4-223ENST00000598717 XP32Q5T750 250 aa10.53□□□□□ -0.72
LTBP4-223ENST00000598717 MMP24-AS1A0A0U1RRL7 71 aa10.5□□□□□ -0.73
LTBP4-223ENST00000598717 HIST1H4AP62805 103 aaKnown RBP10.5□□□□□ -0.73
LTBP4-223ENST00000598717 LPAP08519 4548 aa10.48□□□□□ -0.73
LTBP4-223ENST00000598717 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
LTBP4-223ENST00000598717 KRTAP16-1A8MUX0 517 aa10.47□□□□□ -0.73
LTBP4-223ENST00000598717 HCG22E2RYF7 251 aa10.46□□□□□ -0.73
LTBP4-223ENST00000598717 CASC2Q6XLA1 102 aa10.46□□□□□ -0.73
LTBP4-223ENST00000598717 WFDC13Q8IUB5 93 aa10.46□□□□□ -0.73
LTBP4-223ENST00000598717 TMEM254Q8TBM7 123 aa10.45□□□□□ -0.74
LTBP4-223ENST00000598717 C20orf166-AS1Q96NR2 134 aa10.43□□□□□ -0.74
LTBP4-223ENST00000598717 MRPL34Q9BQ48 92 aaKnown RBP10.43□□□□□ -0.74
LTBP4-223ENST00000598717 Q75L30 129 aa10.42□□□□□ -0.74
LTBP4-223ENST00000598717 A8MUU9 505 aa10.41□□□□□ -0.74
LTBP4-223ENST00000598717 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
LTBP4-223ENST00000598717 RPL37P61927 97 aaKnown RBP10.41□□□□□ -0.74
LTBP4-223ENST00000598717 A0A087WVE0 104 aa10.38□□□□□ -0.75
LTBP4-223ENST00000598717 NDUFS5O43920 106 aa10.37□□□□□ -0.75
LTBP4-223ENST00000598717 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
LTBP4-223ENST00000598717 SEC61BP60468 96 aaKnown RBP10.36□□□□□ -0.75
LTBP4-223ENST00000598717 IMUPQ9GZP8 106 aa10.36□□□□□ -0.75
LTBP4-223ENST00000598717 LRP2P98164 4655 aa10.36□□□□□ -0.75
LTBP4-223ENST00000598717 ATP11AUNQ6ZP68 121 aa10.35□□□□□ -0.75
LTBP4-223ENST00000598717 PCOTHQ58A44 107 aa10.3□□□□□ -0.76
LTBP4-223ENST00000598717 ZCCHC13Q8WW36 166 aaKnown RBP10.25□□□□□ -0.77
LTBP4-223ENST00000598717 TP53AIP1Q9HCN2 124 aa10.24□□□□□ -0.77
LTBP4-223ENST00000598717 MUC17Q685J3 4493 aa10.22□□□□□ -0.77
LTBP4-223ENST00000598717 SCGB1A1P11684 91 aa10.22□□□□□ -0.77
LTBP4-223ENST00000598717 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
LTBP4-223ENST00000598717 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
LTBP4-223ENST00000598717 Q5W150 140 aa10.14□□□□□ -0.79
LTBP4-223ENST00000598717 UQCRQO14949 82 aa10.13□□□□□ -0.79
LTBP4-223ENST00000598717 UBR4Q5T4S7 5183 aa10.13□□□□□ -0.79
LTBP4-223ENST00000598717 OCR1Q9BZK8 76 aa10.1□□□□□ -0.79
LTBP4-223ENST00000598717 TRAV22A0A0B4J277 110 aa10.07□□□□□ -0.8
LTBP4-223ENST00000598717 KRTAP4-1Q9BYQ7 146 aa10.07□□□□□ -0.8
LTBP4-223ENST00000598717 SMIM20Q8N5G0 67 aa10.06□□□□□ -0.8
LTBP4-223ENST00000598717 ATOX1O00244 68 aa10.05□□□□□ -0.8
LTBP4-223ENST00000598717 SPINK7P58062 85 aa10.04□□□□□ -0.8
LTBP4-223ENST00000598717 H0Y9P7 68 aa10.03□□□□□ -0.8
LTBP4-223ENST00000598717 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
LTBP4-223ENST00000598717 IGKV2-30P06310 120 aa10.02□□□□□ -0.81
LTBP4-223ENST00000598717 RNF213Q63HN8 5207 aa10.01□□□□□ -0.81
LTBP4-223ENST00000598717 TRAV7A0A075B6U4 112 aa10□□□□□ -0.81
LTBP4-223ENST00000598717 MP68P56378 58 aa10□□□□□ -0.81
LTBP4-223ENST00000598717 C5orf47Q569G3 176 aa10□□□□□ -0.81
LTBP4-223ENST00000598717 C7orf65Q6ZTY9 151 aa10□□□□□ -0.81
LTBP4-223ENST00000598717 LOC101927531A0A1B0GV80 90 aa9.95□□□□□ -0.82
LTBP4-223ENST00000598717 C1orf64Q8NEQ6 169 aa9.93□□□□□ -0.82
LTBP4-223ENST00000598717 LINC00208Q96KT6 92 aa9.93□□□□□ -0.82
LTBP4-223ENST00000598717 H3BPC8 53 aa9.91□□□□□ -0.82
LTBP4-223ENST00000598717 SERP2Q8N6R1 65 aa9.91□□□□□ -0.82
LTBP4-223ENST00000598717 HRES1P13985 223 aa9.89□□□□□ -0.83
LTBP4-223ENST00000598717 CYP4F30PQ9H0H9 118 aa9.89□□□□□ -0.83
LTBP4-223ENST00000598717 MUC2Q02817 5179 aa9.89□□□□□ -0.83
LTBP4-223ENST00000598717 RBM12B-AS1Q9P1G2 102 aa9.86□□□□□ -0.83
LTBP4-223ENST00000598717 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
LTBP4-223ENST00000598717 COX6B2Q6YFQ2 88 aa9.81□□□□□ -0.84
LTBP4-223ENST00000598717 MPLKIPQ8TAP9 179 aa9.81□□□□□ -0.84
LTBP4-223ENST00000598717 ANAPC13Q9BS18 74 aa9.81□□□□□ -0.84
LTBP4-223ENST00000598717 FAM236DA0A1B0GTK5 79 aa9.8□□□□□ -0.84
LTBP4-223ENST00000598717 FAM236CP0DP71 79 aa9.8□□□□□ -0.84
LTBP4-223ENST00000598717 COX7CP15954 63 aa9.79□□□□□ -0.84
LTBP4-223ENST00000598717 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
LTBP4-223ENST00000598717 C20orf197Q8N268 126 aa9.76□□□□□ -0.85
LTBP4-223ENST00000598717 KLKP1Q107X0 134 aa9.74□□□□□ -0.85
LTBP4-223ENST00000598717 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
LTBP4-223ENST00000598717 KRTAP19-2Q3LHN2 52 aa9.73□□□□□ -0.85
LTBP4-223ENST00000598717 LCE2CQ5TA81 110 aa9.66□□□□□ -0.86
LTBP4-223ENST00000598717 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
LTBP4-223ENST00000598717 FAT4Q6V0I7 4981 aa9.6□□□□□ -0.87
LTBP4-223ENST00000598717 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
LTBP4-223ENST00000598717 CCDC179H3BU77 68 aa9.57□□□□□ -0.88
LTBP4-223ENST00000598717 A8MUN3 132 aa9.55□□□□□ -0.88
LTBP4-223ENST00000598717 NDUFC1O43677 76 aa9.55□□□□□ -0.88
LTBP4-223ENST00000598717 MT1HP80294 61 aa9.53□□□□□ -0.88
LTBP4-223ENST00000598717 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
LTBP4-223ENST00000598717 M0R2T5 61 aa9.49□□□□□ -0.89
LTBP4-223ENST00000598717 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
LTBP4-223ENST00000598717 FLGP20930 4061 aaPredicted RBP9.48□□□□□ -0.89
LTBP4-223ENST00000598717 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
LTBP4-223ENST00000598717 H7BZZ5 65 aa9.46□□□□□ -0.9
LTBP4-223ENST00000598717 S4R3F8 94 aa9.45□□□□□ -0.9
LTBP4-223ENST00000598717 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
LTBP4-223ENST00000598717 ACYP2P14621 99 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms