RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ANKRD29Q8N6D5 301 aa7.02□□□□□ -1.29
SHKBP1-208ENST00000595726 TRBV7-4A0A0J9YYF1 115 aa7.01□□□□□ -1.29
SHKBP1-208ENST00000595726 C9orf118A6NHY6 69 aa7.01□□□□□ -1.29
SHKBP1-208ENST00000595726 SCGB1C2P0DMR2 95 aa7.01□□□□□ -1.29
SHKBP1-208ENST00000595726 UBE2V1Q13404 147 aa7.01□□□□□ -1.29
SHKBP1-208ENST00000595726 LYRM7Q5U5X0 104 aa7.01□□□□□ -1.29
SHKBP1-208ENST00000595726 Q75L30 129 aa7□□□□□ -1.29
SHKBP1-208ENST00000595726 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
SHKBP1-208ENST00000595726 CCKP06307 115 aa6.97□□□□□ -1.29
SHKBP1-208ENST00000595726 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
SHKBP1-208ENST00000595726 A0A1W2PPM0 123 aa6.96□□□□□ -1.3
SHKBP1-208ENST00000595726 ATP11AUNQ6ZP68 121 aa6.96□□□□□ -1.3
SHKBP1-208ENST00000595726 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
SHKBP1-208ENST00000595726 C20orf166-AS1Q96NR2 134 aa6.95□□□□□ -1.3
SHKBP1-208ENST00000595726 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
SHKBP1-208ENST00000595726 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
SHKBP1-208ENST00000595726 TRBV20-1A0A075B6N2 111 aa6.93□□□□□ -1.3
SHKBP1-208ENST00000595726 A8MUU9 505 aa6.93□□□□□ -1.3
SHKBP1-208ENST00000595726 IGKV4-1P06312 121 aa6.93□□□□□ -1.3
SHKBP1-208ENST00000595726 DSCR10P59022 87 aa6.93□□□□□ -1.3
SHKBP1-208ENST00000595726 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
SHKBP1-208ENST00000595726 GTF2H5Q6ZYL4 71 aa6.93□□□□□ -1.3
SHKBP1-208ENST00000595726 BAALC-AS2P0C853 105 aa6.92□□□□□ -1.3
SHKBP1-208ENST00000595726 ATXN8Q156A1 80 aa6.92□□□□□ -1.3
SHKBP1-208ENST00000595726 DSCR8Q96T75 97 aa6.92□□□□□ -1.3
SHKBP1-208ENST00000595726 VPS25Q9BRG1 176 aa6.92□□□□□ -1.3
SHKBP1-208ENST00000595726 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
SHKBP1-208ENST00000595726 A0A1B0GV90 55 aa6.91□□□□□ -1.3
SHKBP1-208ENST00000595726 SPCS1Q9Y6A9 102 aa6.91□□□□□ -1.3
SHKBP1-208ENST00000595726 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.3
SHKBP1-208ENST00000595726 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.3
SHKBP1-208ENST00000595726 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
SHKBP1-208ENST00000595726 C9JAW5 83 aa6.88□□□□□ -1.31
SHKBP1-208ENST00000595726 K7EP34 96 aa6.88□□□□□ -1.31
SHKBP1-208ENST00000595726 LINC00313P59037 77 aa6.88□□□□□ -1.31
SHKBP1-208ENST00000595726 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
SHKBP1-208ENST00000595726 JMJD7-PLA2G4BH0Y9G9 81 aa6.85□□□□□ -1.31
SHKBP1-208ENST00000595726 IGHV6-1A0A0B4J1U7 121 aa6.84□□□□□ -1.31
SHKBP1-208ENST00000595726 Q6ZQT0 140 aa6.84□□□□□ -1.31
SHKBP1-208ENST00000595726 LOC110117498A0A087WWA1 95 aa6.82□□□□□ -1.32
SHKBP1-208ENST00000595726 A0A1B0GVX0 72 aa6.82□□□□□ -1.32
SHKBP1-208ENST00000595726 F8W1H4 67 aa6.81□□□□□ -1.32
SHKBP1-208ENST00000595726 KRTAP20-1Q3LI63 56 aa6.81□□□□□ -1.32
SHKBP1-208ENST00000595726 C8orf87E5RJ46 101 aa6.8□□□□□ -1.32
SHKBP1-208ENST00000595726 C14orf132Q9NPU4 83 aa6.8□□□□□ -1.32
SHKBP1-208ENST00000595726 FAM236DA0A1B0GTK5 79 aa6.79□□□□□ -1.32
SHKBP1-208ENST00000595726 J3KT08 172 aa6.79□□□□□ -1.32
SHKBP1-208ENST00000595726 FAM236CP0DP71 79 aa6.79□□□□□ -1.32
SHKBP1-208ENST00000595726 A0A1B0GW54 56 aa6.78□□□□□ -1.32
SHKBP1-208ENST00000595726 PDE6GP18545 87 aa6.78□□□□□ -1.32
SHKBP1-208ENST00000595726 H3BT86 120 aa6.77□□□□□ -1.33
SHKBP1-208ENST00000595726 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
SHKBP1-208ENST00000595726 NDUFB1O75438 58 aa6.73□□□□□ -1.33
SHKBP1-208ENST00000595726 PRO0461Q9UI25 63 aa6.73□□□□□ -1.33
SHKBP1-208ENST00000595726 A8MWP4 228 aa6.72□□□□□ -1.33
SHKBP1-208ENST00000595726 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
SHKBP1-208ENST00000595726 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
SHKBP1-208ENST00000595726 HRES1P13985 223 aa6.69□□□□□ -1.34
SHKBP1-208ENST00000595726 NREPQ16612 68 aa6.69□□□□□ -1.34
SHKBP1-208ENST00000595726 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
SHKBP1-208ENST00000595726 MDN1Q9NU22 5596 aa6.68□□□□□ -1.34
SHKBP1-208ENST00000595726 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
SHKBP1-208ENST00000595726 ZCCHC13Q8WW36 166 aaKnown RBP6.68□□□□□ -1.34
SHKBP1-208ENST00000595726 ETDBQ3ZM63 59 aa6.67□□□□□ -1.34
SHKBP1-208ENST00000595726 PRR15Q8IV56 129 aa6.66□□□□□ -1.34
SHKBP1-208ENST00000595726 RBM12B-AS1Q9P1G2 102 aa6.65□□□□□ -1.34
SHKBP1-208ENST00000595726 Q6ZVQ6 151 aa6.64□□□□□ -1.35
SHKBP1-208ENST00000595726 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
SHKBP1-208ENST00000595726 J3QR89 54 aa6.63□□□□□ -1.35
SHKBP1-208ENST00000595726 K7EQZ3 153 aa6.62□□□□□ -1.35
SHKBP1-208ENST00000595726 SPINK7P58062 85 aa6.6□□□□□ -1.35
SHKBP1-208ENST00000595726 KMT2DO14686 5537 aa6.59□□□□□ -1.35
SHKBP1-208ENST00000595726 K7ERU9 68 aa6.59□□□□□ -1.35
SHKBP1-208ENST00000595726 TMEM254Q8TBM7 123 aa6.59□□□□□ -1.35
SHKBP1-208ENST00000595726 MRPL34Q9BQ48 92 aaKnown RBP6.59□□□□□ -1.35
SHKBP1-208ENST00000595726 BPY2O14599 106 aa6.58□□□□□ -1.36
SHKBP1-208ENST00000595726 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
SHKBP1-208ENST00000595726 ACYP1P07311 99 aa6.54□□□□□ -1.36
SHKBP1-208ENST00000595726 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
SHKBP1-208ENST00000595726 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
SHKBP1-208ENST00000595726 Q8N9L7 120 aa6.52□□□□□ -1.37
SHKBP1-208ENST00000595726 NDUFS5O43920 106 aa6.51□□□□□ -1.37
SHKBP1-208ENST00000595726 PCP4P48539 62 aa6.5□□□□□ -1.37
SHKBP1-208ENST00000595726 UBL5Q9BZL1 73 aa6.48□□□□□ -1.37
SHKBP1-208ENST00000595726 CASC2Q6XLA1 102 aa6.47□□□□□ -1.37
SHKBP1-208ENST00000595726 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
SHKBP1-208ENST00000595726 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
SHKBP1-208ENST00000595726 Q5W150 140 aa6.45□□□□□ -1.38
SHKBP1-208ENST00000595726 A6NN06 94 aa6.44□□□□□ -1.38
SHKBP1-208ENST00000595726 HCG22E2RYF7 251 aa6.44□□□□□ -1.38
SHKBP1-208ENST00000595726 KRTAP5-9P26371 169 aa6.44□□□□□ -1.38
SHKBP1-208ENST00000595726 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
SHKBP1-208ENST00000595726 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
SHKBP1-208ENST00000595726 C7orf65Q6ZTY9 151 aa6.42□□□□□ -1.38
SHKBP1-208ENST00000595726 CXCL6P80162 114 aa6.39□□□□□ -1.39
SHKBP1-208ENST00000595726 LINC00643Q86TS7 51 aa6.38□□□□□ -1.39
SHKBP1-208ENST00000595726 ATP5EP2Q5VTU8 51 aa6.37□□□□□ -1.39
SHKBP1-208ENST00000595726 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
SHKBP1-208ENST00000595726 MT1BP07438 61 aa6.3□□□□□ -1.4
SHKBP1-208ENST00000595726 C4orf26Q17RF5 130 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms