RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 K7ERU9 68 aa8.66□□□□□ -1.02
FOXA3-202ENST00000594297 J3KT08 172 aa8.62□□□□□ -1.03
FOXA3-202ENST00000594297 KRTAP13-3Q3SY46 172 aa8.61□□□□□ -1.03
FOXA3-202ENST00000594297 LINC00846Q9NV44 126 aa8.61□□□□□ -1.03
FOXA3-202ENST00000594297 Q6ZVQ6 151 aa8.59□□□□□ -1.03
FOXA3-202ENST00000594297 FP248Q71RG6 208 aaPredicted RBP8.59□□□□□ -1.03
FOXA3-202ENST00000594297 C1orf195Q5TG92 126 aa8.58□□□□□ -1.04
FOXA3-202ENST00000594297 BPY2O14599 106 aa8.57□□□□□ -1.04
FOXA3-202ENST00000594297 IGKV4-1P06312 121 aa8.57□□□□□ -1.04
FOXA3-202ENST00000594297 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
FOXA3-202ENST00000594297 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
FOXA3-202ENST00000594297 NDUFB1O75438 58 aa8.56□□□□□ -1.04
FOXA3-202ENST00000594297 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
FOXA3-202ENST00000594297 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
FOXA3-202ENST00000594297 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
FOXA3-202ENST00000594297 Q96NJ1 140 aa8.52□□□□□ -1.05
FOXA3-202ENST00000594297 ATP5EP2Q5VTU8 51 aa8.51□□□□□ -1.05
FOXA3-202ENST00000594297 LINC00643Q86TS7 51 aa8.51□□□□□ -1.05
FOXA3-202ENST00000594297 CXCL6P80162 114 aa8.5□□□□□ -1.05
FOXA3-202ENST00000594297 MT1HP80294 61 aa8.49□□□□□ -1.05
FOXA3-202ENST00000594297 A8MWP4 228 aa8.48□□□□□ -1.05
FOXA3-202ENST00000594297 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
FOXA3-202ENST00000594297 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
FOXA3-202ENST00000594297 IGHV6-1A0A0B4J1U7 121 aa8.44□□□□□ -1.06
FOXA3-202ENST00000594297 IGKV3D-7A0A0C4DH55 119 aa8.43□□□□□ -1.06
FOXA3-202ENST00000594297 C8orf87E5RJ46 101 aa8.43□□□□□ -1.06
FOXA3-202ENST00000594297 DSCR10P59022 87 aa8.43□□□□□ -1.06
FOXA3-202ENST00000594297 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
FOXA3-202ENST00000594297 XP32Q5T750 250 aa8.42□□□□□ -1.06
FOXA3-202ENST00000594297 PRR15Q8IV56 129 aa8.42□□□□□ -1.06
FOXA3-202ENST00000594297 LINC00313P59037 77 aa8.41□□□□□ -1.06
FOXA3-202ENST00000594297 K7EQZ3 153 aa8.39□□□□□ -1.07
FOXA3-202ENST00000594297 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
FOXA3-202ENST00000594297 HIST1H4AP62805 103 aaKnown RBP8.39□□□□□ -1.07
FOXA3-202ENST00000594297 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
FOXA3-202ENST00000594297 Q8N9L7 120 aa8.36□□□□□ -1.07
FOXA3-202ENST00000594297 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
FOXA3-202ENST00000594297 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
FOXA3-202ENST00000594297 IMUPQ9GZP8 106 aa8.33□□□□□ -1.08
FOXA3-202ENST00000594297 hDV103S1A0JD37 113 aa8.31□□□□□ -1.08
FOXA3-202ENST00000594297 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
FOXA3-202ENST00000594297 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
FOXA3-202ENST00000594297 CASC2Q6XLA1 102 aa8.31□□□□□ -1.08
FOXA3-202ENST00000594297 PCOTHQ58A44 107 aa8.29□□□□□ -1.08
FOXA3-202ENST00000594297 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
FOXA3-202ENST00000594297 MMP24-AS1A0A0U1RRL7 71 aa8.28□□□□□ -1.08
FOXA3-202ENST00000594297 WFDC13Q8IUB5 93 aa8.28□□□□□ -1.08
FOXA3-202ENST00000594297 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
FOXA3-202ENST00000594297 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
FOXA3-202ENST00000594297 FLGP20930 4061 aaPredicted RBP8.26□□□□□ -1.09
FOXA3-202ENST00000594297 NOTCH2NLQ7Z3S9 236 aa8.26□□□□□ -1.09
FOXA3-202ENST00000594297 M0R2T5 61 aa8.25□□□□□ -1.09
FOXA3-202ENST00000594297 NDUFS5O43920 106 aa8.24□□□□□ -1.09
FOXA3-202ENST00000594297 A0A087WVE0 104 aa8.22□□□□□ -1.09
FOXA3-202ENST00000594297 Q75L30 129 aa8.22□□□□□ -1.09
FOXA3-202ENST00000594297 KRTAP16-1A8MUX0 517 aa8.21□□□□□ -1.1
FOXA3-202ENST00000594297 SCGB1A1P11684 91 aa8.21□□□□□ -1.1
FOXA3-202ENST00000594297 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.1
FOXA3-202ENST00000594297 ATP11AUNQ6ZP68 121 aa8.2□□□□□ -1.1
FOXA3-202ENST00000594297 Q8N9P0 234 aaPredicted RBP8.2□□□□□ -1.1
FOXA3-202ENST00000594297 A8MUU9 505 aa8.19□□□□□ -1.1
FOXA3-202ENST00000594297 RPL37P61927 97 aaKnown RBP8.18□□□□□ -1.1
FOXA3-202ENST00000594297 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
FOXA3-202ENST00000594297 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
FOXA3-202ENST00000594297 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
FOXA3-202ENST00000594297 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
FOXA3-202ENST00000594297 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
FOXA3-202ENST00000594297 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
FOXA3-202ENST00000594297 UQCRQO14949 82 aa8.08□□□□□ -1.12
FOXA3-202ENST00000594297 SSPOA2VEC9 5147 aa8.07□□□□□ -1.12
FOXA3-202ENST00000594297 ATOX1O00244 68 aa8.07□□□□□ -1.12
FOXA3-202ENST00000594297 USH2AO75445 5202 aa8.03□□□□□ -1.12
FOXA3-202ENST00000594297 TRAV7A0A075B6U4 112 aa8.01□□□□□ -1.13
FOXA3-202ENST00000594297 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
FOXA3-202ENST00000594297 MP68P56378 58 aa8.01□□□□□ -1.13
FOXA3-202ENST00000594297 C5orf47Q569G3 176 aa8.01□□□□□ -1.13
FOXA3-202ENST00000594297 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
FOXA3-202ENST00000594297 H0Y9P7 68 aa7.97□□□□□ -1.13
FOXA3-202ENST00000594297 Q5W150 140 aa7.97□□□□□ -1.13
FOXA3-202ENST00000594297 H3BPC8 53 aa7.94□□□□□ -1.14
FOXA3-202ENST00000594297 SERP2Q8N6R1 65 aa7.94□□□□□ -1.14
FOXA3-202ENST00000594297 FCGBPQ9Y6R7 5405 aaPredicted RBP7.94□□□□□ -1.14
FOXA3-202ENST00000594297 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
FOXA3-202ENST00000594297 C7orf65Q6ZTY9 151 aa7.93□□□□□ -1.14
FOXA3-202ENST00000594297 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
FOXA3-202ENST00000594297 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
FOXA3-202ENST00000594297 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
FOXA3-202ENST00000594297 SPINK7P58062 85 aa7.92□□□□□ -1.14
FOXA3-202ENST00000594297 C1orf64Q8NEQ6 169 aa7.9□□□□□ -1.14
FOXA3-202ENST00000594297 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
FOXA3-202ENST00000594297 ANAPC13Q9BS18 74 aa7.9□□□□□ -1.14
FOXA3-202ENST00000594297 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
FOXA3-202ENST00000594297 MACF1Q9UPN3 7388 aaKnown RBP7.85□□□□□ -1.15
FOXA3-202ENST00000594297 COX7CP15954 63 aa7.84□□□□□ -1.15
FOXA3-202ENST00000594297 CYP4F30PQ9H0H9 118 aa7.84□□□□□ -1.15
FOXA3-202ENST00000594297 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
FOXA3-202ENST00000594297 LCE2BO14633 110 aa7.8□□□□□ -1.16
FOXA3-202ENST00000594297 C20orf197Q8N268 126 aa7.8□□□□□ -1.16
FOXA3-202ENST00000594297 MT2AP02795 61 aa7.78□□□□□ -1.16
FOXA3-202ENST00000594297 SYNE2Q8WXH0 6885 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms