RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 BAALC-AS2P0C853 105 aa5.51□□□□□ -1.53
VPS4B-207ENST00000591519 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
VPS4B-207ENST00000591519 A0A1W2PNM2 257 aa5.5□□□□□ -1.53
VPS4B-207ENST00000591519 ATXN8Q156A1 80 aa5.5□□□□□ -1.53
VPS4B-207ENST00000591519 UBE2V1Q13404 147 aa5.49□□□□□ -1.53
VPS4B-207ENST00000591519 Q6Q795 121 aa5.49□□□□□ -1.53
VPS4B-207ENST00000591519 VPS25Q9BRG1 176 aa5.49□□□□□ -1.53
VPS4B-207ENST00000591519 SS18L2Q9UHA2 77 aa5.48□□□□□ -1.53
VPS4B-207ENST00000591519 CCKP06307 115 aa5.47□□□□□ -1.53
VPS4B-207ENST00000591519 M0R2T5 61 aa5.46□□□□□ -1.54
VPS4B-207ENST00000591519 TAX1BP3O14907 124 aa5.46□□□□□ -1.54
VPS4B-207ENST00000591519 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
VPS4B-207ENST00000591519 LYRM7Q5U5X0 104 aa5.46□□□□□ -1.54
VPS4B-207ENST00000591519 C9JAW5 83 aa5.45□□□□□ -1.54
VPS4B-207ENST00000591519 COX6B2Q6YFQ2 88 aa5.45□□□□□ -1.54
VPS4B-207ENST00000591519 DSCR8Q96T75 97 aa5.45□□□□□ -1.54
VPS4B-207ENST00000591519 TRBV7-4A0A0J9YYF1 115 aa5.44□□□□□ -1.54
VPS4B-207ENST00000591519 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
VPS4B-207ENST00000591519 MTURNQ8N3F0 131 aa5.44□□□□□ -1.54
VPS4B-207ENST00000591519 OBSCN-AS1Q96MR7 158 aa5.44□□□□□ -1.54
VPS4B-207ENST00000591519 SIGMAR1Q99720 223 aa5.44□□□□□ -1.54
VPS4B-207ENST00000591519 A0A1W2PPM0 123 aa5.43□□□□□ -1.54
VPS4B-207ENST00000591519 PCP4L1A6NKN8 68 aa5.43□□□□□ -1.54
VPS4B-207ENST00000591519 Q75L30 129 aa5.43□□□□□ -1.54
VPS4B-207ENST00000591519 Q96NJ1 140 aa5.43□□□□□ -1.54
VPS4B-207ENST00000591519 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
VPS4B-207ENST00000591519 TRBV20-1A0A075B6N2 111 aa5.42□□□□□ -1.54
VPS4B-207ENST00000591519 IGKV4-1P06312 121 aa5.41□□□□□ -1.54
VPS4B-207ENST00000591519 ATP11AUNQ6ZP68 121 aa5.41□□□□□ -1.54
VPS4B-207ENST00000591519 DSCR10P59022 87 aa5.4□□□□□ -1.54
VPS4B-207ENST00000591519 C14orf132Q9NPU4 83 aa5.4□□□□□ -1.54
VPS4B-207ENST00000591519 JMJD7-PLA2G4BH0Y9G9 81 aa5.39□□□□□ -1.55
VPS4B-207ENST00000591519 SPCS1Q9Y6A9 102 aa5.39□□□□□ -1.55
VPS4B-207ENST00000591519 COL5A1-AS1Q5SY13 56 aa5.38□□□□□ -1.55
VPS4B-207ENST00000591519 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
VPS4B-207ENST00000591519 Q6ZQT0 140 aa5.38□□□□□ -1.55
VPS4B-207ENST00000591519 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
VPS4B-207ENST00000591519 LOC110117498A0A087WWA1 95 aa5.35□□□□□ -1.55
VPS4B-207ENST00000591519 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
VPS4B-207ENST00000591519 H3BT86 120 aa5.35□□□□□ -1.55
VPS4B-207ENST00000591519 C20orf166-AS1Q96NR2 134 aa5.35□□□□□ -1.55
VPS4B-207ENST00000591519 A8MUU9 505 aa5.34□□□□□ -1.55
VPS4B-207ENST00000591519 LINC00313P59037 77 aa5.33□□□□□ -1.56
VPS4B-207ENST00000591519 NOTCH2NLQ7Z3S9 236 aa5.33□□□□□ -1.56
VPS4B-207ENST00000591519 PDE6GP18545 87 aa5.32□□□□□ -1.56
VPS4B-207ENST00000591519 C21orf62-AS1Q17RA5 79 aa5.32□□□□□ -1.56
VPS4B-207ENST00000591519 K7EP34 96 aa5.3□□□□□ -1.56
VPS4B-207ENST00000591519 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
VPS4B-207ENST00000591519 KRTAP16-1A8MUX0 517 aa5.28□□□□□ -1.56
VPS4B-207ENST00000591519 J3KT08 172 aa5.28□□□□□ -1.56
VPS4B-207ENST00000591519 NREPQ16612 68 aa5.28□□□□□ -1.56
VPS4B-207ENST00000591519 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
VPS4B-207ENST00000591519 C8orf87E5RJ46 101 aa5.26□□□□□ -1.57
VPS4B-207ENST00000591519 NDUFB1O75438 58 aa5.26□□□□□ -1.57
VPS4B-207ENST00000591519 PRO0461Q9UI25 63 aa5.26□□□□□ -1.57
VPS4B-207ENST00000591519 A0A1B0GW54 56 aa5.25□□□□□ -1.57
VPS4B-207ENST00000591519 GTF2H5Q6ZYL4 71 aa5.25□□□□□ -1.57
VPS4B-207ENST00000591519 IGKV3D-7A0A0C4DH55 119 aa5.24□□□□□ -1.57
VPS4B-207ENST00000591519 A8MWP4 228 aa5.24□□□□□ -1.57
VPS4B-207ENST00000591519 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
VPS4B-207ENST00000591519 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
VPS4B-207ENST00000591519 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.58
VPS4B-207ENST00000591519 USH2AO75445 5202 aa5.21□□□□□ -1.58
VPS4B-207ENST00000591519 K7EQZ3 153 aa5.2□□□□□ -1.58
VPS4B-207ENST00000591519 BPY2O14599 106 aa5.2□□□□□ -1.58
VPS4B-207ENST00000591519 MT2AP02795 61 aa5.2□□□□□ -1.58
VPS4B-207ENST00000591519 Q6ZVQ6 151 aa5.2□□□□□ -1.58
VPS4B-207ENST00000591519 PRR15Q8IV56 129 aa5.2□□□□□ -1.58
VPS4B-207ENST00000591519 SSPOA2VEC9 5147 aa5.2□□□□□ -1.58
VPS4B-207ENST00000591519 F8W1H4 67 aa5.18□□□□□ -1.58
VPS4B-207ENST00000591519 HRES1P13985 223 aa5.18□□□□□ -1.58
VPS4B-207ENST00000591519 ETDBQ3ZM63 59 aa5.18□□□□□ -1.58
VPS4B-207ENST00000591519 Q8N9L7 120 aa5.18□□□□□ -1.58
VPS4B-207ENST00000591519 MMP24-AS1A0A0U1RRL7 71 aa5.17□□□□□ -1.58
VPS4B-207ENST00000591519 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
VPS4B-207ENST00000591519 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.17□□□□□ -1.58
VPS4B-207ENST00000591519 LINC00846Q9NV44 126 aa5.17□□□□□ -1.58
VPS4B-207ENST00000591519 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
VPS4B-207ENST00000591519 MT1FP04733 61 aa5.16□□□□□ -1.58
VPS4B-207ENST00000591519 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
VPS4B-207ENST00000591519 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
VPS4B-207ENST00000591519 NDUFS5O43920 106 aa5.15□□□□□ -1.59
VPS4B-207ENST00000591519 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
VPS4B-207ENST00000591519 UBL5Q9BZL1 73 aa5.15□□□□□ -1.59
VPS4B-207ENST00000591519 hDV103S1A0JD37 113 aa5.14□□□□□ -1.59
VPS4B-207ENST00000591519 WFDC13Q8IUB5 93 aa5.14□□□□□ -1.59
VPS4B-207ENST00000591519 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
VPS4B-207ENST00000591519 IGKV2-30P06310 120 aa5.13□□□□□ -1.59
VPS4B-207ENST00000591519 MRPL34Q9BQ48 92 aaKnown RBP5.13□□□□□ -1.59
VPS4B-207ENST00000591519 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
VPS4B-207ENST00000591519 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
VPS4B-207ENST00000591519 A0A1B0GV90 55 aa5.11□□□□□ -1.59
VPS4B-207ENST00000591519 CASC2Q6XLA1 102 aa5.1□□□□□ -1.59
VPS4B-207ENST00000591519 KRTAP2-2Q9BYT5 123 aa5.1□□□□□ -1.59
VPS4B-207ENST00000591519 SPINK7P58062 85 aa5.09□□□□□ -1.59
VPS4B-207ENST00000591519 HCG22E2RYF7 251 aa5.07□□□□□ -1.6
VPS4B-207ENST00000591519 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
VPS4B-207ENST00000591519 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
VPS4B-207ENST00000591519 IGKV2D-30A0A075B6S6 120 aa5.03□□□□□ -1.6
VPS4B-207ENST00000591519 Q5W150 140 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms