RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 DMBT1Q9UGM3 2413 aaPredicted RBP7.47□□□□□ -1.21
PTBP1-216ENST00000590887 KRTAP10-8P60410 259 aa7.47□□□□□ -1.21
PTBP1-216ENST00000590887 A0A087WVE0 104 aa7.46□□□□□ -1.22
PTBP1-216ENST00000590887 K7EQZ3 153 aa7.46□□□□□ -1.22
PTBP1-216ENST00000590887 A0A1B0GVX0 72 aa7.45□□□□□ -1.22
PTBP1-216ENST00000590887 HCG22E2RYF7 251 aa7.45□□□□□ -1.22
PTBP1-216ENST00000590887 C8orf87E5RJ46 101 aa7.45□□□□□ -1.22
PTBP1-216ENST00000590887 C1orf195Q5TG92 126 aa7.45□□□□□ -1.22
PTBP1-216ENST00000590887 Q8N9L7 120 aa7.45□□□□□ -1.22
PTBP1-216ENST00000590887 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
PTBP1-216ENST00000590887 CASC2Q6XLA1 102 aa7.41□□□□□ -1.22
PTBP1-216ENST00000590887 ANAPC13Q9BS18 74 aa7.41□□□□□ -1.22
PTBP1-216ENST00000590887 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
PTBP1-216ENST00000590887 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
PTBP1-216ENST00000590887 LINC00313P59037 77 aa7.38□□□□□ -1.23
PTBP1-216ENST00000590887 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
PTBP1-216ENST00000590887 WFDC13Q8IUB5 93 aa7.37□□□□□ -1.23
PTBP1-216ENST00000590887 MMP24-AS1A0A0U1RRL7 71 aa7.36□□□□□ -1.23
PTBP1-216ENST00000590887 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
PTBP1-216ENST00000590887 TRAV7A0A075B6U4 112 aa7.35□□□□□ -1.23
PTBP1-216ENST00000590887 FP248Q71RG6 208 aaPredicted RBP7.35□□□□□ -1.23
PTBP1-216ENST00000590887 PCP4P48539 62 aa7.34□□□□□ -1.23
PTBP1-216ENST00000590887 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
PTBP1-216ENST00000590887 TP53AIP1Q9HCN2 124 aa7.34□□□□□ -1.23
PTBP1-216ENST00000590887 TNXBP22105 4242 aa7.33□□□□□ -1.24
PTBP1-216ENST00000590887 MRPL34Q9BQ48 92 aaKnown RBP7.33□□□□□ -1.24
PTBP1-216ENST00000590887 J3QL48 77 aa7.31□□□□□ -1.24
PTBP1-216ENST00000590887 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
PTBP1-216ENST00000590887 UQCRQO14949 82 aa7.3□□□□□ -1.24
PTBP1-216ENST00000590887 COX7CP15954 63 aa7.3□□□□□ -1.24
PTBP1-216ENST00000590887 NDUFS5O43920 106 aa7.29□□□□□ -1.24
PTBP1-216ENST00000590887 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
PTBP1-216ENST00000590887 C5orf47Q569G3 176 aa7.28□□□□□ -1.24
PTBP1-216ENST00000590887 OCR1Q9BZK8 76 aa7.27□□□□□ -1.25
PTBP1-216ENST00000590887 MP68P56378 58 aa7.25□□□□□ -1.25
PTBP1-216ENST00000590887 RETNLBQ9BQ08 111 aa7.24□□□□□ -1.25
PTBP1-216ENST00000590887 H3BPC8 53 aa7.23□□□□□ -1.25
PTBP1-216ENST00000590887 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
PTBP1-216ENST00000590887 Q8N9P0 234 aaPredicted RBP7.23□□□□□ -1.25
PTBP1-216ENST00000590887 IGLV7-46A0A075B6I9 117 aa7.22□□□□□ -1.25
PTBP1-216ENST00000590887 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
PTBP1-216ENST00000590887 PRR4Q16378 134 aa7.19□□□□□ -1.26
PTBP1-216ENST00000590887 KRTAP16-1A8MUX0 517 aa7.18□□□□□ -1.26
PTBP1-216ENST00000590887 C9orf92A6NGG3 77 aa7.17□□□□□ -1.26
PTBP1-216ENST00000590887 H0Y9P7 68 aa7.17□□□□□ -1.26
PTBP1-216ENST00000590887 NDUFC1O43677 76 aa7.16□□□□□ -1.26
PTBP1-216ENST00000590887 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
PTBP1-216ENST00000590887 CCDC179H3BU77 68 aa7.14□□□□□ -1.27
PTBP1-216ENST00000590887 KLKP1Q107X0 134 aa7.14□□□□□ -1.27
PTBP1-216ENST00000590887 C20orf166-AS1Q96NR2 134 aa7.14□□□□□ -1.27
PTBP1-216ENST00000590887 A8MUU9 505 aa7.13□□□□□ -1.27
PTBP1-216ENST00000590887 Q75L30 129 aa7.12□□□□□ -1.27
PTBP1-216ENST00000590887 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
PTBP1-216ENST00000590887 LOC101927531A0A1B0GV80 90 aa7.11□□□□□ -1.27
PTBP1-216ENST00000590887 C1orf64Q8NEQ6 169 aa7.11□□□□□ -1.27
PTBP1-216ENST00000590887 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
PTBP1-216ENST00000590887 TPRXLQ17RH7 258 aa7.1□□□□□ -1.27
PTBP1-216ENST00000590887 KRTAP13-3Q3SY46 172 aa7.1□□□□□ -1.27
PTBP1-216ENST00000590887 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.27
PTBP1-216ENST00000590887 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
PTBP1-216ENST00000590887 ATP11AUNQ6ZP68 121 aa7.08□□□□□ -1.28
PTBP1-216ENST00000590887 SNURFQ9Y675 71 aa7.08□□□□□ -1.28
PTBP1-216ENST00000590887 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
PTBP1-216ENST00000590887 Q5W150 140 aa7.04□□□□□ -1.28
PTBP1-216ENST00000590887 LRP2P98164 4655 aa7.04□□□□□ -1.28
PTBP1-216ENST00000590887 XP32Q5T750 250 aa7.03□□□□□ -1.28
PTBP1-216ENST00000590887 TMEM258P61165 79 aa7.02□□□□□ -1.29
PTBP1-216ENST00000590887 IGKV2-30P06310 120 aa7□□□□□ -1.29
PTBP1-216ENST00000590887 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
PTBP1-216ENST00000590887 C7orf65Q6ZTY9 151 aa7□□□□□ -1.29
PTBP1-216ENST00000590887 H7BZZ5 65 aa6.98□□□□□ -1.29
PTBP1-216ENST00000590887 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
PTBP1-216ENST00000590887 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
PTBP1-216ENST00000590887 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
PTBP1-216ENST00000590887 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
PTBP1-216ENST00000590887 PCOTHQ58A44 107 aa6.94□□□□□ -1.3
PTBP1-216ENST00000590887 LPAP08519 4548 aa6.93□□□□□ -1.3
PTBP1-216ENST00000590887 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
PTBP1-216ENST00000590887 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
PTBP1-216ENST00000590887 CYSTM1Q9H1C7 97 aa6.91□□□□□ -1.3
PTBP1-216ENST00000590887 SPINK7P58062 85 aa6.9□□□□□ -1.3
PTBP1-216ENST00000590887 RNF213Q63HN8 5207 aa6.87□□□□□ -1.31
PTBP1-216ENST00000590887 HRES1P13985 223 aa6.86□□□□□ -1.31
PTBP1-216ENST00000590887 A8MUN3 132 aa6.82□□□□□ -1.32
PTBP1-216ENST00000590887 ACYP2P14621 99 aa6.82□□□□□ -1.32
PTBP1-216ENST00000590887 SERP1Q9Y6X1 66 aa6.79□□□□□ -1.32
PTBP1-216ENST00000590887 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
PTBP1-216ENST00000590887 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
PTBP1-216ENST00000590887 RBM12B-AS1Q9P1G2 102 aa6.76□□□□□ -1.33
PTBP1-216ENST00000590887 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
PTBP1-216ENST00000590887 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
PTBP1-216ENST00000590887 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
PTBP1-216ENST00000590887 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
PTBP1-216ENST00000590887 MUC2Q02817 5179 aa6.71□□□□□ -1.34
PTBP1-216ENST00000590887 COA5Q86WW8 74 aa6.68□□□□□ -1.34
PTBP1-216ENST00000590887 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
PTBP1-216ENST00000590887 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
PTBP1-216ENST00000590887 H1FX-AS1Q4G0G2 97 aa6.61□□□□□ -1.35
PTBP1-216ENST00000590887 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
PTBP1-216ENST00000590887 V9GYY9 64 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms