RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	IGKV4-1	P06312	121 aa		13.97	□□□□□ -0.17
CIRBP-223	ENST00000589266	DEFB116	Q30KQ4	102 aa		13.92	□□□□□ -0.18
CIRBP-223	ENST00000589266	SIGMAR1	Q99720	223 aa		13.92	□□□□□ -0.18
CIRBP-223	ENST00000589266		K7ERU9	68 aa		13.9	□□□□□ -0.18
CIRBP-223	ENST00000589266	BPY2	O14599	106 aa		13.89	□□□□□ -0.19
CIRBP-223	ENST00000589266	TPRXL	Q17RH7	258 aa		13.88	□□□□□ -0.19
CIRBP-223	ENST00000589266		A8MWP4	228 aa		13.86	□□□□□ -0.19
CIRBP-223	ENST00000589266	NDUFB1	O75438	58 aa		13.86	□□□□□ -0.19
CIRBP-223	ENST00000589266	KRTAP13-3	Q3SY46	172 aa		13.84	□□□□□ -0.19
CIRBP-223	ENST00000589266	DSCR10	P59022	87 aa		13.82	□□□□□ -0.2
CIRBP-223	ENST00000589266	CXCL6	P80162	114 aa		13.82	□□□□□ -0.2
CIRBP-223	ENST00000589266		A0A1B0GVX0	72 aa		13.81	□□□□□ -0.2
CIRBP-223	ENST00000589266	ATP5EP2	Q5VTU8	51 aa		13.79	□□□□□ -0.2
CIRBP-223	ENST00000589266	LINC00643	Q86TS7	51 aa		13.79	□□□□□ -0.2
CIRBP-223	ENST00000589266	PRR15	Q8IV56	129 aa		13.78	□□□□□ -0.2
CIRBP-223	ENST00000589266	IGKV3D-7	A0A0C4DH55	119 aa		13.77	□□□□□ -0.21
CIRBP-223	ENST00000589266	C8orf87	E5RJ46	101 aa		13.77	□□□□□ -0.21
CIRBP-223	ENST00000589266	IGHV6-1	A0A0B4J1U7	121 aa		13.75	□□□□□ -0.21
CIRBP-223	ENST00000589266	LINC00313	P59037	77 aa		13.73	□□□□□ -0.21
CIRBP-223	ENST00000589266		K7EQZ3	153 aa		13.71	□□□□□ -0.21
CIRBP-223	ENST00000589266	CDIP1	Q9H305	208 aa		13.71	□□□□□ -0.21
CIRBP-223	ENST00000589266	C9orf92	A6NGG3	77 aa		13.7	□□□□□ -0.22
CIRBP-223	ENST00000589266	MUC17	Q685J3	4493 aa		13.68	□□□□□ -0.22
CIRBP-223	ENST00000589266	C8orf17	Q9NRJ1	99 aa		13.67	□□□□□ -0.22
CIRBP-223	ENST00000589266	NOTCH2NL	Q7Z3S9	236 aa		13.64	□□□□□ -0.23
CIRBP-223	ENST00000589266	XP32	Q5T750	250 aa		13.63	□□□□□ -0.23
CIRBP-223	ENST00000589266		Q8N9L7	120 aa		13.63	□□□□□ -0.23
CIRBP-223	ENST00000589266	MMP24-AS1	A0A0U1RRL7	71 aa		13.6	□□□□□ -0.23
CIRBP-223	ENST00000589266	KRTAP16-1	A8MUX0	517 aa		13.6	□□□□□ -0.23
CIRBP-223	ENST00000589266	LCE2D	Q5TA82	110 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-223	ENST00000589266	FSIP2	Q5CZC0	6907 aa		13.57	□□□□□ -0.24
CIRBP-223	ENST00000589266	CRCT1	Q9UGL9	99 aa		13.56	□□□□□ -0.24
CIRBP-223	ENST00000589266	TMEM254	Q8TBM7	123 aa		13.55	□□□□□ -0.24
CIRBP-223	ENST00000589266	C20orf166-AS1	Q96NR2	134 aa		13.55	□□□□□ -0.24
CIRBP-223	ENST00000589266		Q75L30	129 aa		13.54	□□□□□ -0.24
CIRBP-223	ENST00000589266	hDV103S1	A0JD37	113 aa		13.53	□□□□□ -0.24
CIRBP-223	ENST00000589266	HCG22	E2RYF7	251 aa		13.53	□□□□□ -0.24
CIRBP-223	ENST00000589266		A8MUU9	505 aa		13.52	□□□□□ -0.25
CIRBP-223	ENST00000589266	HIST1H4A	P62805	103 aa	Known RBP	13.51	□□□□□ -0.25
CIRBP-223	ENST00000589266	RPL37	P61927	97 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-223	ENST00000589266	CASC2	Q6XLA1	102 aa		13.5	□□□□□ -0.25
CIRBP-223	ENST00000589266	MRPL34	Q9BQ48	92 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-223	ENST00000589266		Q8N9P0	234 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-223	ENST00000589266	IMUP	Q9GZP8	106 aa		13.47	□□□□□ -0.25
CIRBP-223	ENST00000589266	WFDC13	Q8IUB5	93 aa		13.46	□□□□□ -0.25
CIRBP-223	ENST00000589266	SEC61B	P60468	96 aa	Known RBP	13.43	□□□□□ -0.26
CIRBP-223	ENST00000589266	MT-ATP8	P03928	68 aa		13.42	□□□□□ -0.26
CIRBP-223	ENST00000589266		A0A087WVE0	104 aa		13.37	□□□□□ -0.27
CIRBP-223	ENST00000589266	ATP11AUN	Q6ZP68	121 aa		13.37	□□□□□ -0.27
CIRBP-223	ENST00000589266	NDUFS5	O43920	106 aa		13.31	□□□□□ -0.28
CIRBP-223	ENST00000589266	PCOTH	Q58A44	107 aa		13.29	□□□□□ -0.28
CIRBP-223	ENST00000589266	TP53AIP1	Q9HCN2	124 aa		13.28	□□□□□ -0.28
CIRBP-223	ENST00000589266	ZCCHC13	Q8WW36	166 aa	Known RBP	13.27	□□□□□ -0.29
CIRBP-223	ENST00000589266	KRTAP4-1	Q9BYQ7	146 aa		13.24	□□□□□ -0.29
CIRBP-223	ENST00000589266	SCGB1A1	P11684	91 aa		13.14	□□□□□ -0.31
CIRBP-223	ENST00000589266	UQCRQ	O14949	82 aa		13.12	□□□□□ -0.31
CIRBP-223	ENST00000589266	FAM236A	A0A1B0GUQ0	79 aa		13.11	□□□□□ -0.31
CIRBP-223	ENST00000589266	FAM236B	A0A1B0GV22	79 aa		13.11	□□□□□ -0.31
CIRBP-223	ENST00000589266		Q5W150	140 aa		13.11	□□□□□ -0.31
CIRBP-223	ENST00000589266	OCR1	Q9BZK8	76 aa		13.1	□□□□□ -0.31
CIRBP-223	ENST00000589266	SMIM20	Q8N5G0	67 aa		13.06	□□□□□ -0.32
CIRBP-223	ENST00000589266	LCE2C	Q5TA81	110 aa		13.05	□□□□□ -0.32
CIRBP-223	ENST00000589266	TRAV22	A0A0B4J277	110 aa		13.02	□□□□□ -0.33
CIRBP-223	ENST00000589266	ATOX1	O00244	68 aa		13.01	□□□□□ -0.33
CIRBP-223	ENST00000589266	SPINK7	P58062	85 aa		12.98	□□□□□ -0.33
CIRBP-223	ENST00000589266	MT1H	P80294	61 aa		12.96	□□□□□ -0.33
CIRBP-223	ENST00000589266	C5orf47	Q569G3	176 aa		12.96	□□□□□ -0.33
CIRBP-223	ENST00000589266	TRAV7	A0A075B6U4	112 aa		12.94	□□□□□ -0.34
CIRBP-223	ENST00000589266	C7orf65	Q6ZTY9	151 aa		12.94	□□□□□ -0.34
CIRBP-223	ENST00000589266		H0Y9P7	68 aa		12.93	□□□□□ -0.34
CIRBP-223	ENST00000589266	IGKV2-30	P06310	120 aa		12.92	□□□□□ -0.34
CIRBP-223	ENST00000589266	KRTAP19-2	Q3LHN2	52 aa		12.92	□□□□□ -0.34
CIRBP-223	ENST00000589266	MP68	P56378	58 aa		12.91	□□□□□ -0.34
CIRBP-223	ENST00000589266	IGKV2D-30	A0A075B6S6	120 aa		12.89	□□□□□ -0.35
CIRBP-223	ENST00000589266	LOC101927531	A0A1B0GV80	90 aa		12.89	□□□□□ -0.35
CIRBP-223	ENST00000589266		H3BPC8	53 aa		12.88	□□□□□ -0.35
CIRBP-223	ENST00000589266	LOR	P23490	312 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-223	ENST00000589266	HRES1	P13985	223 aa		12.83	□□□□□ -0.36
CIRBP-223	ENST00000589266	KRTAP10-6	P60371	365 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-223	ENST00000589266	SERP2	Q8N6R1	65 aa		12.82	□□□□□ -0.36
CIRBP-223	ENST00000589266	C1orf64	Q8NEQ6	169 aa		12.81	□□□□□ -0.36
CIRBP-223	ENST00000589266	CYP4F30P	Q9H0H9	118 aa		12.81	□□□□□ -0.36
CIRBP-223	ENST00000589266	LINC00208	Q96KT6	92 aa		12.79	□□□□□ -0.36
CIRBP-223	ENST00000589266	MPLKIP	Q8TAP9	179 aa		12.78	□□□□□ -0.36
CIRBP-223	ENST00000589266	RBM12B-AS1	Q9P1G2	102 aa		12.74	□□□□□ -0.37
CIRBP-223	ENST00000589266	KRTAP9-7	A8MTY7	169 aa		12.72	□□□□□ -0.37
CIRBP-223	ENST00000589266		M0R2T5	61 aa		12.71	□□□□□ -0.37
CIRBP-223	ENST00000589266	COX7C	P15954	63 aa		12.66	□□□□□ -0.38
CIRBP-223	ENST00000589266	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	12.65	□□□□□ -0.38
CIRBP-223	ENST00000589266	ANAPC13	Q9BS18	74 aa		12.64	□□□□□ -0.39
CIRBP-223	ENST00000589266	COX6B2	Q6YFQ2	88 aa		12.61	□□□□□ -0.39
CIRBP-223	ENST00000589266	FAM236D	A0A1B0GTK5	79 aa		12.59	□□□□□ -0.39
CIRBP-223	ENST00000589266	FAM236C	P0DP71	79 aa		12.59	□□□□□ -0.39
CIRBP-223	ENST00000589266	C4orf26	Q17RF5	130 aa		12.58	□□□□□ -0.4
CIRBP-223	ENST00000589266	C20orf197	Q8N268	126 aa		12.58	□□□□□ -0.4
CIRBP-223	ENST00000589266	KLKP1	Q107X0	134 aa		12.57	□□□□□ -0.4
CIRBP-223	ENST00000589266	FLG	P20930	4061 aa	Predicted RBP	12.54	□□□□□ -0.4
CIRBP-223	ENST00000589266	SNURF	Q9Y675	71 aa		12.52	□□□□□ -0.41
CIRBP-223	ENST00000589266	H1FX-AS1	Q4G0G2	97 aa		12.45	□□□□□ -0.42
CIRBP-223	ENST00000589266	KRTAP3-1	Q9BYR8	98 aa		12.43	□□□□□ -0.42

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