RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ATP5EP2Q5VTU8 51 aa12.61□□□□□ -0.39
ACTN4-210ENST00000588618 IGHV6-1A0A0B4J1U7 121 aa12.59□□□□□ -0.39
ACTN4-210ENST00000588618 IGKV3D-7A0A0C4DH55 119 aa12.58□□□□□ -0.4
ACTN4-210ENST00000588618 LPAP08519 4548 aa12.58□□□□□ -0.4
ACTN4-210ENST00000588618 A0A1B0GVX0 72 aa12.57□□□□□ -0.4
ACTN4-210ENST00000588618 HMCN2Q8NDA2 5059 aa12.56□□□□□ -0.4
ACTN4-210ENST00000588618 K7EQZ3 153 aa12.55□□□□□ -0.4
ACTN4-210ENST00000588618 Q8N9L7 120 aa12.55□□□□□ -0.4
ACTN4-210ENST00000588618 PRR15Q8IV56 129 aa12.54□□□□□ -0.4
ACTN4-210ENST00000588618 C9orf92A6NGG3 77 aa12.52□□□□□ -0.41
ACTN4-210ENST00000588618 C8orf87E5RJ46 101 aa12.5□□□□□ -0.41
ACTN4-210ENST00000588618 LINC00313P59037 77 aa12.5□□□□□ -0.41
ACTN4-210ENST00000588618 TPRXLQ17RH7 258 aa12.5□□□□□ -0.41
ACTN4-210ENST00000588618 NOTCH2NLQ7Z3S9 236 aa12.48□□□□□ -0.41
ACTN4-210ENST00000588618 HIST1H4AP62805 103 aaKnown RBP12.48□□□□□ -0.41
ACTN4-210ENST00000588618 KRTAP13-3Q3SY46 172 aa12.48□□□□□ -0.41
ACTN4-210ENST00000588618 C8orf17Q9NRJ1 99 aa12.45□□□□□ -0.42
ACTN4-210ENST00000588618 MT-ATP8P03928 68 aa12.44□□□□□ -0.42
ACTN4-210ENST00000588618 LRP2P98164 4655 aa12.43□□□□□ -0.42
ACTN4-210ENST00000588618 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
ACTN4-210ENST00000588618 hDV103S1A0JD37 113 aa12.37□□□□□ -0.43
ACTN4-210ENST00000588618 HCG22E2RYF7 251 aa12.37□□□□□ -0.43
ACTN4-210ENST00000588618 WFDC13Q8IUB5 93 aa12.37□□□□□ -0.43
ACTN4-210ENST00000588618 A0A087WVE0 104 aa12.35□□□□□ -0.43
ACTN4-210ENST00000588618 CASC2Q6XLA1 102 aa12.35□□□□□ -0.43
ACTN4-210ENST00000588618 KRTAP16-1A8MUX0 517 aa12.34□□□□□ -0.43
ACTN4-210ENST00000588618 XP32Q5T750 250 aa12.34□□□□□ -0.43
ACTN4-210ENST00000588618 IMUPQ9GZP8 106 aa12.32□□□□□ -0.44
ACTN4-210ENST00000588618 TMEM254Q8TBM7 123 aa12.31□□□□□ -0.44
ACTN4-210ENST00000588618 MRPL34Q9BQ48 92 aaKnown RBP12.3□□□□□ -0.44
ACTN4-210ENST00000588618 NDUFS5O43920 106 aa12.25□□□□□ -0.45
ACTN4-210ENST00000588618 C20orf166-AS1Q96NR2 134 aa12.25□□□□□ -0.45
ACTN4-210ENST00000588618 Q75L30 129 aa12.23□□□□□ -0.45
ACTN4-210ENST00000588618 A8MUU9 505 aa12.22□□□□□ -0.45
ACTN4-210ENST00000588618 Q8N9P0 234 aaPredicted RBP12.22□□□□□ -0.45
ACTN4-210ENST00000588618 RPL37P61927 97 aaKnown RBP12.2□□□□□ -0.46
ACTN4-210ENST00000588618 ATP11AUNQ6ZP68 121 aa12.16□□□□□ -0.46
ACTN4-210ENST00000588618 SCGB1A1P11684 91 aa12.14□□□□□ -0.47
ACTN4-210ENST00000588618 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
ACTN4-210ENST00000588618 MUC17Q685J3 4493 aa12.12□□□□□ -0.47
ACTN4-210ENST00000588618 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
ACTN4-210ENST00000588618 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
ACTN4-210ENST00000588618 TP53AIP1Q9HCN2 124 aa12.09□□□□□ -0.47
ACTN4-210ENST00000588618 PCOTHQ58A44 107 aa12.06□□□□□ -0.48
ACTN4-210ENST00000588618 ZCCHC13Q8WW36 166 aaKnown RBP12.06□□□□□ -0.48
ACTN4-210ENST00000588618 UBR4Q5T4S7 5183 aa12.03□□□□□ -0.48
ACTN4-210ENST00000588618 UQCRQO14949 82 aa11.98□□□□□ -0.49
ACTN4-210ENST00000588618 Q5W150 140 aa11.98□□□□□ -0.49
ACTN4-210ENST00000588618 OCR1Q9BZK8 76 aa11.98□□□□□ -0.49
ACTN4-210ENST00000588618 ATOX1O00244 68 aa11.97□□□□□ -0.49
ACTN4-210ENST00000588618 SMIM20Q8N5G0 67 aa11.95□□□□□ -0.5
ACTN4-210ENST00000588618 PCP4P48539 62 aa11.94□□□□□ -0.5
ACTN4-210ENST00000588618 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
ACTN4-210ENST00000588618 MUC2Q02817 5179 aa11.88□□□□□ -0.51
ACTN4-210ENST00000588618 TRAV7A0A075B6U4 112 aa11.86□□□□□ -0.51
ACTN4-210ENST00000588618 H0Y9P7 68 aa11.86□□□□□ -0.51
ACTN4-210ENST00000588618 MP68P56378 58 aa11.85□□□□□ -0.51
ACTN4-210ENST00000588618 C5orf47Q569G3 176 aa11.85□□□□□ -0.51
ACTN4-210ENST00000588618 RNF213Q63HN8 5207 aa11.85□□□□□ -0.51
ACTN4-210ENST00000588618 KRTAP4-1Q9BYQ7 146 aa11.83□□□□□ -0.52
ACTN4-210ENST00000588618 IGKV2D-30A0A075B6S6 120 aa11.82□□□□□ -0.52
ACTN4-210ENST00000588618 IGKV2-30P06310 120 aa11.82□□□□□ -0.52
ACTN4-210ENST00000588618 SPINK7P58062 85 aa11.8□□□□□ -0.52
ACTN4-210ENST00000588618 C7orf65Q6ZTY9 151 aa11.8□□□□□ -0.52
ACTN4-210ENST00000588618 SERP2Q8N6R1 65 aa11.78□□□□□ -0.52
ACTN4-210ENST00000588618 LOC101927531A0A1B0GV80 90 aa11.76□□□□□ -0.53
ACTN4-210ENST00000588618 LINC00208Q96KT6 92 aa11.75□□□□□ -0.53
ACTN4-210ENST00000588618 C1orf64Q8NEQ6 169 aa11.74□□□□□ -0.53
ACTN4-210ENST00000588618 H3BPC8 53 aa11.73□□□□□ -0.53
ACTN4-210ENST00000588618 ANAPC13Q9BS18 74 aa11.73□□□□□ -0.53
ACTN4-210ENST00000588618 CYP4F30PQ9H0H9 118 aa11.67□□□□□ -0.54
ACTN4-210ENST00000588618 COX7CP15954 63 aa11.65□□□□□ -0.54
ACTN4-210ENST00000588618 C20orf197Q8N268 126 aa11.61□□□□□ -0.55
ACTN4-210ENST00000588618 HRES1P13985 223 aa11.6□□□□□ -0.55
ACTN4-210ENST00000588618 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
ACTN4-210ENST00000588618 RBM12B-AS1Q9P1G2 102 aa11.59□□□□□ -0.55
ACTN4-210ENST00000588618 SNURFQ9Y675 71 aa11.57□□□□□ -0.56
ACTN4-210ENST00000588618 KLKP1Q107X0 134 aa11.53□□□□□ -0.56
ACTN4-210ENST00000588618 FAM236DA0A1B0GTK5 79 aa11.52□□□□□ -0.57
ACTN4-210ENST00000588618 FAM236CP0DP71 79 aa11.52□□□□□ -0.57
ACTN4-210ENST00000588618 C4orf26Q17RF5 130 aa11.51□□□□□ -0.57
ACTN4-210ENST00000588618 MPLKIPQ8TAP9 179 aa11.5□□□□□ -0.57
ACTN4-210ENST00000588618 COX6B2Q6YFQ2 88 aa11.49□□□□□ -0.57
ACTN4-210ENST00000588618 CCDC179H3BU77 68 aa11.48□□□□□ -0.57
ACTN4-210ENST00000588618 FAT4Q6V0I7 4981 aa11.46□□□□□ -0.57
ACTN4-210ENST00000588618 CYSTM1Q9H1C7 97 aa11.46□□□□□ -0.58
ACTN4-210ENST00000588618 KRTAP19-2Q3LHN2 52 aa11.45□□□□□ -0.58
ACTN4-210ENST00000588618 NDUFC1O43677 76 aa11.38□□□□□ -0.59
ACTN4-210ENST00000588618 KRTAP3-1Q9BYR8 98 aa11.35□□□□□ -0.59
ACTN4-210ENST00000588618 LCE2CQ5TA81 110 aa11.32□□□□□ -0.6
ACTN4-210ENST00000588618 FLGP20930 4061 aaPredicted RBP11.31□□□□□ -0.6
ACTN4-210ENST00000588618 H7BZZ5 65 aa11.3□□□□□ -0.6
ACTN4-210ENST00000588618 H1FX-AS1Q4G0G2 97 aa11.29□□□□□ -0.6
ACTN4-210ENST00000588618 A8MUN3 132 aa11.28□□□□□ -0.6
ACTN4-210ENST00000588618 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
ACTN4-210ENST00000588618 DMAC1Q96GE9 116 aa11.21□□□□□ -0.61
ACTN4-210ENST00000588618 ACYP2P14621 99 aa11.15□□□□□ -0.63
ACTN4-210ENST00000588618 S4R3F8 94 aa11.13□□□□□ -0.63
ACTN4-210ENST00000588618 MT1HP80294 61 aa11.12□□□□□ -0.63
ACTN4-210ENST00000588618 M0R2T5 61 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms