RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 A0A087X002 238 aa7.16□□□□□ -1.26
CDK5RAP3-231ENST00000584063 A0A1B0GW54 56 aa7.15□□□□□ -1.26
CDK5RAP3-231ENST00000584063 SPINK7P58062 85 aa7.15□□□□□ -1.26
CDK5RAP3-231ENST00000584063 IGLV5-37A0A075B6J1 123 aa7.14□□□□□ -1.27
CDK5RAP3-231ENST00000584063 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
CDK5RAP3-231ENST00000584063 PANO1I0J062 215 aa7.12□□□□□ -1.27
CDK5RAP3-231ENST00000584063 KRTAP21-3Q3LHN1 58 aa7.12□□□□□ -1.27
CDK5RAP3-231ENST00000584063 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
CDK5RAP3-231ENST00000584063 NDUFAF8A1L188 74 aa7.12□□□□□ -1.27
CDK5RAP3-231ENST00000584063 FRAS1Q86XX4 4008 aa7.11□□□□□ -1.27
CDK5RAP3-231ENST00000584063 SPAG11AQ6PDA7 123 aa7.1□□□□□ -1.27
CDK5RAP3-231ENST00000584063 DNAH2Q9P225 4427 aa7.1□□□□□ -1.27
CDK5RAP3-231ENST00000584063 VPS13DQ5THJ4 4388 aa7.1□□□□□ -1.27
CDK5RAP3-231ENST00000584063 IGLV5-52A0A0A0MRZ9 124 aa7.09□□□□□ -1.27
CDK5RAP3-231ENST00000584063 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
CDK5RAP3-231ENST00000584063 C14orf177Q52M58 125 aa7.08□□□□□ -1.28
CDK5RAP3-231ENST00000584063 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
CDK5RAP3-231ENST00000584063 K7ERS5 55 aa7.06□□□□□ -1.28
CDK5RAP3-231ENST00000584063 WWC2-AS2Q96NR7 200 aa7.06□□□□□ -1.28
CDK5RAP3-231ENST00000584063 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-231ENST00000584063 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
CDK5RAP3-231ENST00000584063 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP3-231ENST00000584063 CIRBP-AS1Q8TBR5 109 aa7.05□□□□□ -1.28
CDK5RAP3-231ENST00000584063 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
CDK5RAP3-231ENST00000584063 A0A087WTM6 91 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 DNAH8Q96JB1 4490 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 C9orf163Q8N9P6 203 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 HECTD4Q9Y4D8 3996 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 LCE6AA0A183 80 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 H0Y9P7 68 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
CDK5RAP3-231ENST00000584063 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
CDK5RAP3-231ENST00000584063 DNAH17Q9UFH2 4485 aa7.01□□□□□ -1.29
CDK5RAP3-231ENST00000584063 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
CDK5RAP3-231ENST00000584063 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
CDK5RAP3-231ENST00000584063 DNAH6Q9C0G6 4158 aa6.98□□□□□ -1.29
CDK5RAP3-231ENST00000584063 KRTAP29-1A8MX34 341 aaPredicted RBP6.97□□□□□ -1.29
CDK5RAP3-231ENST00000584063 NDUFB1O75438 58 aa6.95□□□□□ -1.3
CDK5RAP3-231ENST00000584063 LINC00472Q9H8W2 130 aa6.95□□□□□ -1.3
CDK5RAP3-231ENST00000584063 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
CDK5RAP3-231ENST00000584063 A8MUU9 505 aa6.94□□□□□ -1.3
CDK5RAP3-231ENST00000584063 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
CDK5RAP3-231ENST00000584063 KRTAP10-2P60368 255 aa6.92□□□□□ -1.3
CDK5RAP3-231ENST00000584063 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
CDK5RAP3-231ENST00000584063 MMP24-AS1A0A0U1RRL7 71 aa6.91□□□□□ -1.3
CDK5RAP3-231ENST00000584063 SPINK6Q6UWN8 80 aa6.91□□□□□ -1.3
CDK5RAP3-231ENST00000584063 KRTAP25-1Q3LHN0 102 aa6.91□□□□□ -1.3
CDK5RAP3-231ENST00000584063 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
CDK5RAP3-231ENST00000584063 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
CDK5RAP3-231ENST00000584063 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
CDK5RAP3-231ENST00000584063 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
CDK5RAP3-231ENST00000584063 ALMS1Q8TCU4 4167 aa6.88□□□□□ -1.31
CDK5RAP3-231ENST00000584063 COA5Q86WW8 74 aa6.87□□□□□ -1.31
CDK5RAP3-231ENST00000584063 SPRR1BP22528 89 aa6.86□□□□□ -1.31
CDK5RAP3-231ENST00000584063 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
CDK5RAP3-231ENST00000584063 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
CDK5RAP3-231ENST00000584063 Q96NJ1 140 aa6.85□□□□□ -1.31
CDK5RAP3-231ENST00000584063 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
CDK5RAP3-231ENST00000584063 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
CDK5RAP3-231ENST00000584063 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
CDK5RAP3-231ENST00000584063 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
CDK5RAP3-231ENST00000584063 LRP1BQ9NZR2 4599 aa6.81□□□□□ -1.32
CDK5RAP3-231ENST00000584063 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
CDK5RAP3-231ENST00000584063 PKD1P98161 4303 aa6.78□□□□□ -1.32
CDK5RAP3-231ENST00000584063 H3BPC8 53 aa6.77□□□□□ -1.33
CDK5RAP3-231ENST00000584063 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
CDK5RAP3-231ENST00000584063 ZNF861PO60384 105 aa6.76□□□□□ -1.33
CDK5RAP3-231ENST00000584063 Q5W150 140 aa6.75□□□□□ -1.33
CDK5RAP3-231ENST00000584063 RYR2Q92736 4967 aa6.75□□□□□ -1.33
CDK5RAP3-231ENST00000584063 HRES1P13985 223 aa6.73□□□□□ -1.33
CDK5RAP3-231ENST00000584063 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
CDK5RAP3-231ENST00000584063 MRPL34Q9BQ48 92 aaKnown RBP6.73□□□□□ -1.33
CDK5RAP3-231ENST00000584063 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
CDK5RAP3-231ENST00000584063 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.33
CDK5RAP3-231ENST00000584063 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
CDK5RAP3-231ENST00000584063 IGLV7-43P04211 117 aa6.7□□□□□ -1.34
CDK5RAP3-231ENST00000584063 RYR3Q15413 4870 aa6.7□□□□□ -1.34
CDK5RAP3-231ENST00000584063 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
CDK5RAP3-231ENST00000584063 CAMK2N1Q7Z7J9 78 aa6.67□□□□□ -1.34
CDK5RAP3-231ENST00000584063 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
CDK5RAP3-231ENST00000584063 FAT1Q14517 4588 aa6.65□□□□□ -1.35
CDK5RAP3-231ENST00000584063 Q6ZSA8 131 aa6.64□□□□□ -1.35
CDK5RAP3-231ENST00000584063 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
CDK5RAP3-231ENST00000584063 UQCR11O14957 56 aa6.63□□□□□ -1.35
CDK5RAP3-231ENST00000584063 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
CDK5RAP3-231ENST00000584063 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
CDK5RAP3-231ENST00000584063 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
CDK5RAP3-231ENST00000584063 A0A1B0GU69 56 aa6.57□□□□□ -1.36
CDK5RAP3-231ENST00000584063 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
CDK5RAP3-231ENST00000584063 IGKV2-30P06310 120 aa6.56□□□□□ -1.36
CDK5RAP3-231ENST00000584063 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
CDK5RAP3-231ENST00000584063 KRTAP13-3Q3SY46 172 aa6.54□□□□□ -1.36
CDK5RAP3-231ENST00000584063 A0A1B0GVY2 172 aa6.53□□□□□ -1.36
CDK5RAP3-231ENST00000584063 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
CDK5RAP3-231ENST00000584063 CRIPTQ9P021 101 aa6.52□□□□□ -1.37
CDK5RAP3-231ENST00000584063 SPINK1P00995 79 aa6.51□□□□□ -1.37
CDK5RAP3-231ENST00000584063 ACYP2P14621 99 aa6.51□□□□□ -1.37
CDK5RAP3-231ENST00000584063 EPPK1P58107 5090 aaKnown RBP6.49□□□□□ -1.37
CDK5RAP3-231ENST00000584063 LINC00304Q8N9R0 145 aa6.48□□□□□ -1.37
CDK5RAP3-231ENST00000584063 KRTAP1-4P0C5Y4 121 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms