RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 IGKV3D-7A0A0C4DH55 119 aa5.23□□□□□ -1.57
RFFL-210ENST00000582308 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
RFFL-210ENST00000582308 NOTCH2NLQ7Z3S9 236 aa5.23□□□□□ -1.57
RFFL-210ENST00000582308 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
RFFL-210ENST00000582308 K7EQZ3 153 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 K7ERU9 68 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 NDUFB1O75438 58 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 PRR15Q8IV56 129 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 Q8N9L7 120 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 CDIP1Q9H305 208 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 LRP2P98164 4655 aa5.21□□□□□ -1.58
RFFL-210ENST00000582308 LINC00313P59037 77 aa5.2□□□□□ -1.58
RFFL-210ENST00000582308 CXCL6P80162 114 aa5.2□□□□□ -1.58
RFFL-210ENST00000582308 XP32Q5T750 250 aa5.19□□□□□ -1.58
RFFL-210ENST00000582308 LINC00643Q86TS7 51 aa5.19□□□□□ -1.58
RFFL-210ENST00000582308 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
RFFL-210ENST00000582308 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
RFFL-210ENST00000582308 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
RFFL-210ENST00000582308 MMP24-AS1A0A0U1RRL7 71 aa5.16□□□□□ -1.58
RFFL-210ENST00000582308 ATP5EP2Q5VTU8 51 aa5.16□□□□□ -1.58
RFFL-210ENST00000582308 A8MUU9 505 aa5.13□□□□□ -1.59
RFFL-210ENST00000582308 Q75L30 129 aa5.13□□□□□ -1.59
RFFL-210ENST00000582308 C20orf166-AS1Q96NR2 134 aa5.13□□□□□ -1.59
RFFL-210ENST00000582308 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
RFFL-210ENST00000582308 RPL37P61927 97 aaKnown RBP5.12□□□□□ -1.59
RFFL-210ENST00000582308 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
RFFL-210ENST00000582308 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
RFFL-210ENST00000582308 WFDC13Q8IUB5 93 aa5.11□□□□□ -1.59
RFFL-210ENST00000582308 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
RFFL-210ENST00000582308 HCG22E2RYF7 251 aa5.1□□□□□ -1.59
RFFL-210ENST00000582308 CASC2Q6XLA1 102 aa5.1□□□□□ -1.59
RFFL-210ENST00000582308 Q8N9P0 234 aaPredicted RBP5.1□□□□□ -1.59
RFFL-210ENST00000582308 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
RFFL-210ENST00000582308 MT-ATP8P03928 68 aa5.09□□□□□ -1.59
RFFL-210ENST00000582308 A0A087WVE0 104 aa5.08□□□□□ -1.6
RFFL-210ENST00000582308 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
RFFL-210ENST00000582308 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
RFFL-210ENST00000582308 UBR4Q5T4S7 5183 aa5.06□□□□□ -1.6
RFFL-210ENST00000582308 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
RFFL-210ENST00000582308 IMUPQ9GZP8 106 aa5.05□□□□□ -1.6
RFFL-210ENST00000582308 NDUFS5O43920 106 aa5.04□□□□□ -1.6
RFFL-210ENST00000582308 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
RFFL-210ENST00000582308 ZCCHC13Q8WW36 166 aaKnown RBP5.02□□□□□ -1.61
RFFL-210ENST00000582308 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
RFFL-210ENST00000582308 Q5W150 140 aa5.01□□□□□ -1.61
RFFL-210ENST00000582308 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
RFFL-210ENST00000582308 FAM236AA0A1B0GUQ0 79 aa4.96□□□□□ -1.62
RFFL-210ENST00000582308 FAM236BA0A1B0GV22 79 aa4.96□□□□□ -1.62
RFFL-210ENST00000582308 OCR1Q9BZK8 76 aa4.96□□□□□ -1.62
RFFL-210ENST00000582308 MUC2Q02817 5179 aa4.96□□□□□ -1.62
RFFL-210ENST00000582308 UQCRQO14949 82 aa4.94□□□□□ -1.62
RFFL-210ENST00000582308 SCGB1A1P11684 91 aa4.94□□□□□ -1.62
RFFL-210ENST00000582308 SPINK7P58062 85 aa4.93□□□□□ -1.62
RFFL-210ENST00000582308 TRAV22A0A0B4J277 110 aa4.91□□□□□ -1.62
RFFL-210ENST00000582308 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
RFFL-210ENST00000582308 H0Y9P7 68 aa4.9□□□□□ -1.63
RFFL-210ENST00000582308 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
RFFL-210ENST00000582308 HRES1P13985 223 aa4.89□□□□□ -1.63
RFFL-210ENST00000582308 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
RFFL-210ENST00000582308 ATOX1O00244 68 aa4.88□□□□□ -1.63
RFFL-210ENST00000582308 C7orf65Q6ZTY9 151 aa4.88□□□□□ -1.63
RFFL-210ENST00000582308 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
RFFL-210ENST00000582308 C5orf47Q569G3 176 aa4.87□□□□□ -1.63
RFFL-210ENST00000582308 SMIM20Q8N5G0 67 aa4.87□□□□□ -1.63
RFFL-210ENST00000582308 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
RFFL-210ENST00000582308 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
RFFL-210ENST00000582308 C1orf64Q8NEQ6 169 aa4.85□□□□□ -1.63
RFFL-210ENST00000582308 LINC00208Q96KT6 92 aa4.85□□□□□ -1.63
RFFL-210ENST00000582308 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.63
RFFL-210ENST00000582308 MP68P56378 58 aa4.84□□□□□ -1.63
RFFL-210ENST00000582308 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
RFFL-210ENST00000582308 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
RFFL-210ENST00000582308 H3BPC8 53 aa4.82□□□□□ -1.64
RFFL-210ENST00000582308 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
RFFL-210ENST00000582308 FAT4Q6V0I7 4981 aa4.8□□□□□ -1.64
RFFL-210ENST00000582308 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
RFFL-210ENST00000582308 KLKP1Q107X0 134 aa4.79□□□□□ -1.64
RFFL-210ENST00000582308 C4orf26Q17RF5 130 aa4.79□□□□□ -1.64
RFFL-210ENST00000582308 A0A0U1RQV1 116 aa4.78□□□□□ -1.64
RFFL-210ENST00000582308 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
RFFL-210ENST00000582308 FAM236DA0A1B0GTK5 79 aa4.77□□□□□ -1.65
RFFL-210ENST00000582308 FAM236CP0DP71 79 aa4.77□□□□□ -1.65
RFFL-210ENST00000582308 COX7CP15954 63 aa4.76□□□□□ -1.65
RFFL-210ENST00000582308 SNURFQ9Y675 71 aa4.76□□□□□ -1.65
RFFL-210ENST00000582308 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
RFFL-210ENST00000582308 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
RFFL-210ENST00000582308 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
RFFL-210ENST00000582308 MT1HP80294 61 aa4.72□□□□□ -1.65
RFFL-210ENST00000582308 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
RFFL-210ENST00000582308 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
RFFL-210ENST00000582308 CCDC179H3BU77 68 aa4.68□□□□□ -1.66
RFFL-210ENST00000582308 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
RFFL-210ENST00000582308 A8MUN3 132 aa4.65□□□□□ -1.67
RFFL-210ENST00000582308 H7BZZ5 65 aa4.64□□□□□ -1.67
RFFL-210ENST00000582308 DMAC1Q96GE9 116 aa4.64□□□□□ -1.67
RFFL-210ENST00000582308 M0R2T5 61 aa4.63□□□□□ -1.67
RFFL-210ENST00000582308 NDUFC1O43677 76 aa4.63□□□□□ -1.67
RFFL-210ENST00000582308 SPANXA2-OT1Q8N9U9 137 aa4.63□□□□□ -1.67
RFFL-210ENST00000582308 S4R3F8 94 aa4.62□□□□□ -1.67
RFFL-210ENST00000582308 PCP4P48539 62 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms