RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 PRLHP81277 87 aa1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 KRTAP25-1Q3LHN0 102 aa1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 KRTAP26-1Q6PEX3 210 aa1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 KRTAP13-1Q8IUC0 172 aa1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 DMAC1Q96GE9 116 aa1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 Q96NJ1 140 aa1.03□□□□□ -2.24
PTP4A1-204ENST00000578299 CSPG4Q6UVK1 2322 aa1.03□□□□□ -2.25
PTP4A1-204ENST00000578299 FN1P02751 2386 aaKnown RBP1.03□□□□□ -2.25
PTP4A1-204ENST00000578299 GVINP1Q7Z2Y8 2422 aa1.03□□□□□ -2.25
PTP4A1-204ENST00000578299 PRRC2CQ9Y520 2896 aaKnown RBP1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 TACC2O95359 2948 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 A0A1B0GU69 56 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 K7EIL1 84 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 DEFB4AO15263 64 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 SPG11Q96JI7 2443 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 CCL19Q99731 98 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 TP53AIP1Q9HCN2 124 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 CELSR1Q9NYQ6 3014 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 STARD9Q9P2P6 4700 aa1.02□□□□□ -2.25
PTP4A1-204ENST00000578299 JMJD1CQ15652 2540 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 NBASA2RRP1 2371 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 OTOGLQ3ZCN5 2332 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 UQCR11O14957 56 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 HTN3P15516 51 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 SPRR1BP22528 89 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 DEFB135Q30KP9 77 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 DEFB113Q30KQ7 82 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 MRPL34Q9BQ48 92 aaKnown RBP1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 PIEZO2Q9H5I5 2752 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 FAT2Q9NYQ8 4349 aa1.01□□□□□ -2.25
PTP4A1-204ENST00000578299 TLN1Q9Y490 2541 aaKnown RBP1□□□□□ -2.25
PTP4A1-204ENST00000578299 IGF2RP11717 2491 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 RIF1Q5UIP0 2472 aaKnown RBP1□□□□□ -2.25
PTP4A1-204ENST00000578299 HIVEP3Q5T1R4 2406 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 ASH1LQ9NR48 2969 aaKnown RBP1□□□□□ -2.25
PTP4A1-204ENST00000578299 H0YAA0 97 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 ACYP2P14621 99 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 TLN2Q9Y4G6 2542 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 CELSR2Q9HCU4 2923 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 ITPR1Q14643 2758 aa1□□□□□ -2.25
PTP4A1-204ENST00000578299 ANKRD11Q6UB99 2663 aaPredicted RBP1□□□□□ -2.25
PTP4A1-204ENST00000578299 FAT3Q8TDW7 4589 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 LRP1BQ9NZR2 4599 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 HIVEP2P31629 2446 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 AKAP13Q12802 2813 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 ANKRD17O75179 2603 aaKnown RBP0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 A0A087WTM6 91 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 LINC01556Q5JQF7 62 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 PSORS1C2Q9UIG4 136 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 R4GN34 69 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 LRP1Q07954 4544 aaKnown RBP0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 LRBAP50851 2863 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 MUC6Q6W4X9 2439 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 VPS13BQ7Z7G8 4022 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 HSPG2P98160 4391 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 F8P00451 2351 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 FAT1Q14517 4588 aa0.99□□□□□ -2.25
PTP4A1-204ENST00000578299 NCOR2Q9Y618 2525 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 MAP1AP78559 2803 aaPredicted RBP0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 KMT2BQ9UMN6 2715 aaPredicted RBP0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 SPTBN4Q9H254 2564 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 A0A096LNI7 61 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 NUPR2A6NF83 97 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 LY6G6CO95867 125 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 KRTAP12-3P60328 96 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 C20orf166-AS1Q96NR2 134 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 CRIPTQ9P021 101 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 CHD6Q8TD26 2715 aa0.98□□□□□ -2.25
PTP4A1-204ENST00000578299 PTPN13Q12923 2485 aa0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 SPART-AS1P0CW21 52 aa0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 SSBP3-AS1Q7Z2R9 100 aa0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 ZFYVE26Q68DK2 2539 aa0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 KMT2AQ03164 3969 aa0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 SETXQ7Z333 2677 aaKnown RBP0.97□□□□□ -2.25
PTP4A1-204ENST00000578299 SONP18583 2426 aaKnown RBP0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 SPINK1P00995 79 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 KRTAP12-4P60329 112 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 TPRXLQ17RH7 258 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 CRYBG3Q68DQ2 2970 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 SPINK6Q6UWN8 80 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 Q6ZSA8 131 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 TNXBP22105 4242 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 PKD1P98161 4303 aa0.96□□□□□ -2.26
PTP4A1-204ENST00000578299 MYO9AB2RTY4 2548 aa0.95□□□□□ -2.26
PTP4A1-204ENST00000578299 USP9XQ93008 2570 aaPredicted RBP0.95□□□□□ -2.26
PTP4A1-204ENST00000578299 NBDYA0A0U1RRE5 68 aa0.95□□□□□ -2.26
PTP4A1-204ENST00000578299 H3BNG1 76 aa0.95□□□□□ -2.26
PTP4A1-204ENST00000578299 C10orf95Q9H7T3 257 aa0.95□□□□□ -2.26
PTP4A1-204ENST00000578299 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
PTP4A1-204ENST00000578299 FLG2Q5D862 2391 aaPredicted RBP0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 MUC19Q7Z5P9 8384 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 PKD1L2Q7Z442 2459 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 NAV2Q8IVL1 2488 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 MTORP42345 2549 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 GCN1Q92616 2671 aaKnown RBP0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 HERC1Q15751 4861 aa0.94□□□□□ -2.26
PTP4A1-204ENST00000578299 APCP25054 2843 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms