RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 C6orf99Q4VX62 202 aa6.24□□□□□ -1.41
SMARCE1-214ENST00000578112 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
SMARCE1-214ENST00000578112 A6NN06 94 aa6.23□□□□□ -1.41
SMARCE1-214ENST00000578112 NCR3O14931 201 aa6.23□□□□□ -1.41
SMARCE1-214ENST00000578112 Q6ZRX8 168 aa6.23□□□□□ -1.41
SMARCE1-214ENST00000578112 KRTAP4-1Q9BYQ7 146 aa6.23□□□□□ -1.41
SMARCE1-214ENST00000578112 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
SMARCE1-214ENST00000578112 CFC1P0CG37 223 aa6.21□□□□□ -1.42
SMARCE1-214ENST00000578112 SOSTDC1Q6X4U4 206 aa6.21□□□□□ -1.42
SMARCE1-214ENST00000578112 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.42
SMARCE1-214ENST00000578112 PSPHP1O15172 72 aa6.2□□□□□ -1.42
SMARCE1-214ENST00000578112 LEPROTO15243 131 aa6.2□□□□□ -1.42
SMARCE1-214ENST00000578112 IGLV9-49A0A0B4J1Y8 123 aa6.2□□□□□ -1.42
SMARCE1-214ENST00000578112 TRIAP1O43715 76 aa6.2□□□□□ -1.42
SMARCE1-214ENST00000578112 IGLV6-57P01721 117 aa6.2□□□□□ -1.42
SMARCE1-214ENST00000578112 SPRR1BP22528 89 aa6.2□□□□□ -1.42
SMARCE1-214ENST00000578112 F8WEM9 126 aa6.19□□□□□ -1.42
SMARCE1-214ENST00000578112 IGHV6-1A0A0B4J1U7 121 aa6.18□□□□□ -1.42
SMARCE1-214ENST00000578112 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
SMARCE1-214ENST00000578112 Q9BRP9 147 aa6.18□□□□□ -1.42
SMARCE1-214ENST00000578112 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
SMARCE1-214ENST00000578112 TRAV23DV6A0A075B6W5 121 aa6.17□□□□□ -1.42
SMARCE1-214ENST00000578112 PLNP26678 52 aa6.17□□□□□ -1.42
SMARCE1-214ENST00000578112 CLEC2BQ92478 149 aa6.16□□□□□ -1.42
SMARCE1-214ENST00000578112 COX6CP09669 75 aa6.15□□□□□ -1.42
SMARCE1-214ENST00000578112 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.42
SMARCE1-214ENST00000578112 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.43
SMARCE1-214ENST00000578112 DHRS4-AS1Q9P1J3 65 aa6.15□□□□□ -1.43
SMARCE1-214ENST00000578112 MT1HP80294 61 aa6.14□□□□□ -1.43
SMARCE1-214ENST00000578112 ATP5EP2Q5VTU8 51 aa6.14□□□□□ -1.43
SMARCE1-214ENST00000578112 A0A087WVE0 104 aa6.1□□□□□ -1.43
SMARCE1-214ENST00000578112 TSPEAR-AS2P59090 65 aa6.1□□□□□ -1.43
SMARCE1-214ENST00000578112 IGLV8-61A0A075B6I0 122 aa6.09□□□□□ -1.43
SMARCE1-214ENST00000578112 PCOTHQ58A44 107 aa6.09□□□□□ -1.43
SMARCE1-214ENST00000578112 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
SMARCE1-214ENST00000578112 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-214ENST00000578112 Q1RN00 199 aa6.08□□□□□ -1.44
SMARCE1-214ENST00000578112 IGKV3D-7A0A0C4DH55 119 aa6.08□□□□□ -1.44
SMARCE1-214ENST00000578112 TRAV22A0A0B4J277 110 aa6.07□□□□□ -1.44
SMARCE1-214ENST00000578112 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-214ENST00000578112 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
SMARCE1-214ENST00000578112 ST20-AS1Q8NBB2 130 aa6.06□□□□□ -1.44
SMARCE1-214ENST00000578112 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
SMARCE1-214ENST00000578112 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
SMARCE1-214ENST00000578112 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
SMARCE1-214ENST00000578112 H7C2G1 150 aa6.05□□□□□ -1.44
SMARCE1-214ENST00000578112 ELOF1P60002 83 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-214ENST00000578112 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
SMARCE1-214ENST00000578112 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
SMARCE1-214ENST00000578112 COX7BP24311 80 aa6.04□□□□□ -1.44
SMARCE1-214ENST00000578112 SNURFQ9Y675 71 aa6.04□□□□□ -1.44
SMARCE1-214ENST00000578112 DNAL4O96015 105 aa6.02□□□□□ -1.45
SMARCE1-214ENST00000578112 LINC00308Q8TCZ7 52 aa6.02□□□□□ -1.45
SMARCE1-214ENST00000578112 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
SMARCE1-214ENST00000578112 C9orf92A6NGG3 77 aa6.01□□□□□ -1.45
SMARCE1-214ENST00000578112 Q5VV11 94 aa6.01□□□□□ -1.45
SMARCE1-214ENST00000578112 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
SMARCE1-214ENST00000578112 LITAFQ99732 161 aa6□□□□□ -1.45
SMARCE1-214ENST00000578112 TRBV7-4A0A0J9YYF1 115 aa5.99□□□□□ -1.45
SMARCE1-214ENST00000578112 A8MU10 97 aa5.99□□□□□ -1.45
SMARCE1-214ENST00000578112 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
SMARCE1-214ENST00000578112 LINC00846Q9NV44 126 aa5.99□□□□□ -1.45
SMARCE1-214ENST00000578112 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
SMARCE1-214ENST00000578112 M0R2T5 61 aa5.98□□□□□ -1.45
SMARCE1-214ENST00000578112 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
SMARCE1-214ENST00000578112 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
SMARCE1-214ENST00000578112 SMIM29Q86T20 159 aa5.97□□□□□ -1.45
SMARCE1-214ENST00000578112 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
SMARCE1-214ENST00000578112 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
SMARCE1-214ENST00000578112 MUSTN1Q8IVN3 82 aa5.93□□□□□ -1.46
SMARCE1-214ENST00000578112 OBSCN-AS1Q96MR7 158 aa5.93□□□□□ -1.46
SMARCE1-214ENST00000578112 A0A1B0GW54 56 aa5.93□□□□□ -1.46
SMARCE1-214ENST00000578112 DEFB105AQ8NG35 78 aa5.92□□□□□ -1.46
SMARCE1-214ENST00000578112 C1orf64Q8NEQ6 169 aa5.89□□□□□ -1.47
SMARCE1-214ENST00000578112 A6NED7 52 aa5.86□□□□□ -1.47
SMARCE1-214ENST00000578112 FLGP20930 4061 aaPredicted RBP5.85□□□□□ -1.47
SMARCE1-214ENST00000578112 LOC101927531A0A1B0GV80 90 aa5.85□□□□□ -1.47
SMARCE1-214ENST00000578112 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
SMARCE1-214ENST00000578112 UBL5Q9BZL1 73 aa5.85□□□□□ -1.47
SMARCE1-214ENST00000578112 NREPQ16612 68 aa5.84□□□□□ -1.47
SMARCE1-214ENST00000578112 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
SMARCE1-214ENST00000578112 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.48
SMARCE1-214ENST00000578112 C14orf132Q9NPU4 83 aa5.82□□□□□ -1.48
SMARCE1-214ENST00000578112 LINC00575Q6W349 94 aa5.82□□□□□ -1.48
SMARCE1-214ENST00000578112 SMIM11BQ8TCY0 68 aa5.82□□□□□ -1.48
SMARCE1-214ENST00000578112 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
SMARCE1-214ENST00000578112 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
SMARCE1-214ENST00000578112 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.81□□□□□ -1.48
SMARCE1-214ENST00000578112 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
SMARCE1-214ENST00000578112 C20orf166-AS1Q96NR2 134 aa5.8□□□□□ -1.48
SMARCE1-214ENST00000578112 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
SMARCE1-214ENST00000578112 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
SMARCE1-214ENST00000578112 ROMO1P60602 79 aa5.78□□□□□ -1.48
SMARCE1-214ENST00000578112 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
SMARCE1-214ENST00000578112 A8MUU9 505 aa5.78□□□□□ -1.48
SMARCE1-214ENST00000578112 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
SMARCE1-214ENST00000578112 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
SMARCE1-214ENST00000578112 JMJD7-PLA2G4BH0Y9G9 81 aa5.76□□□□□ -1.49
SMARCE1-214ENST00000578112 Q6ZQY7 126 aa5.76□□□□□ -1.49
SMARCE1-214ENST00000578112 ADM2Q7Z4H4 148 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms