RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 CHD9Q3L8U1 2897 aa1.96□□□□□ -2.1
CDH8-205ENST00000577730 AKAP13Q12802 2813 aa1.95□□□□□ -2.1
CDH8-205ENST00000577730 FLNBO75369 2602 aaKnown RBP1.95□□□□□ -2.1
CDH8-205ENST00000577730 APCP25054 2843 aa1.95□□□□□ -2.1
CDH8-205ENST00000577730 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
CDH8-205ENST00000577730 TRANK1O15050 2925 aa1.95□□□□□ -2.1
CDH8-205ENST00000577730 USH2AO75445 5202 aa1.95□□□□□ -2.1
CDH8-205ENST00000577730 UTP20O75691 2785 aaKnown RBP1.94□□□□□ -2.1
CDH8-205ENST00000577730 DNHD1Q96M86 4753 aa1.93□□□□□ -2.1
CDH8-205ENST00000577730 HERC2O95714 4834 aa1.93□□□□□ -2.1
CDH8-205ENST00000577730 KRTAP19-4Q3LI73 84 aa1.91□□□□□ -2.1
CDH8-205ENST00000577730 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
CDH8-205ENST00000577730 EP400Q96L91 3159 aa1.91□□□□□ -2.1
CDH8-205ENST00000577730 CHD7Q9P2D1 2997 aa1.91□□□□□ -2.1
CDH8-205ENST00000577730 MGAQ8IWI9 3026 aa1.91□□□□□ -2.1
CDH8-205ENST00000577730 LOC100996750A0A140TA64 210 aa1.91□□□□□ -2.1
CDH8-205ENST00000577730 KRTAP4-6Q9BYQ5 205 aa1.91□□□□□ -2.1
CDH8-205ENST00000577730 LRBAP50851 2863 aa1.9□□□□□ -2.11
CDH8-205ENST00000577730 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
CDH8-205ENST00000577730 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
CDH8-205ENST00000577730 IGSF10Q6WRI0 2623 aa1.89□□□□□ -2.11
CDH8-205ENST00000577730 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
CDH8-205ENST00000577730 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
CDH8-205ENST00000577730 NBEAQ8NFP9 2946 aa1.89□□□□□ -2.11
CDH8-205ENST00000577730 ZNF292O60281 2723 aa1.88□□□□□ -2.11
CDH8-205ENST00000577730 TEX15Q9BXT5 2789 aa1.88□□□□□ -2.11
CDH8-205ENST00000577730 TNRC18O15417 2968 aaPredicted RBP1.88□□□□□ -2.11
CDH8-205ENST00000577730 KRTAP10-12P60413 245 aa1.87□□□□□ -2.11
CDH8-205ENST00000577730 CFAP54Q96N23 3096 aa1.87□□□□□ -2.11
CDH8-205ENST00000577730 NIPBLQ6KC79 2804 aaeCLIP1.87□□□□□ -2.11
CDH8-205ENST00000577730 HIVEP1P15822 2718 aa1.86□□□□□ -2.11
CDH8-205ENST00000577730 HERC1Q15751 4861 aa1.85□□□□□ -2.11
CDH8-205ENST00000577730 FRYQ5TBA9 3013 aa1.85□□□□□ -2.11
CDH8-205ENST00000577730 DNAH12Q6ZR08 3092 aa1.85□□□□□ -2.11
CDH8-205ENST00000577730 KALRNO60229 2985 aa1.85□□□□□ -2.11
CDH8-205ENST00000577730 LORP23490 312 aaPredicted RBP1.84□□□□□ -2.11
CDH8-205ENST00000577730 DSPP15924 2871 aaKnown RBP1.83□□□□□ -2.12
CDH8-205ENST00000577730 ITPR2Q14571 2701 aa1.83□□□□□ -2.12
CDH8-205ENST00000577730 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
CDH8-205ENST00000577730 ASH1LQ9NR48 2969 aaKnown RBP1.82□□□□□ -2.12
CDH8-205ENST00000577730 ZFHX3Q15911 3703 aa1.81□□□□□ -2.12
CDH8-205ENST00000577730 ZZEF1O43149 2961 aa1.81□□□□□ -2.12
CDH8-205ENST00000577730 CELSR2Q9HCU4 2923 aa1.81□□□□□ -2.12
CDH8-205ENST00000577730 UTRNP46939 3433 aa1.81□□□□□ -2.12
CDH8-205ENST00000577730 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
CDH8-205ENST00000577730 GOLGB1Q14789 3259 aaKnown RBP1.79□□□□□ -2.12
CDH8-205ENST00000577730 C5orf42Q9H799 3197 aa1.79□□□□□ -2.12
CDH8-205ENST00000577730 LAMA1P25391 3075 aa1.79□□□□□ -2.12
CDH8-205ENST00000577730 TRIOO75962 3097 aa1.78□□□□□ -2.12
CDH8-205ENST00000577730 CEP350Q5VT06 3117 aa1.78□□□□□ -2.12
CDH8-205ENST00000577730 KRTAP10-5P60370 271 aa1.78□□□□□ -2.12
CDH8-205ENST00000577730 FREM2Q5SZK8 3169 aa1.77□□□□□ -2.13
CDH8-205ENST00000577730 PRUNE2Q8WUY3 3088 aa1.76□□□□□ -2.13
CDH8-205ENST00000577730 TENM3Q9P273 2699 aa1.75□□□□□ -2.13
CDH8-205ENST00000577730 HTTP42858 3142 aa1.75□□□□□ -2.13
CDH8-205ENST00000577730 PCNTO95613 3336 aa1.75□□□□□ -2.13
CDH8-205ENST00000577730 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
CDH8-205ENST00000577730 HRNRQ86YZ3 2850 aaPredicted RBP1.75□□□□□ -2.13
CDH8-205ENST00000577730 NF1P21359 2839 aa1.74□□□□□ -2.13
CDH8-205ENST00000577730 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
CDH8-205ENST00000577730 KRTAP10-4P60372 401 aaPredicted RBP1.73□□□□□ -2.13
CDH8-205ENST00000577730 MXRA5Q9NR99 2828 aa1.73□□□□□ -2.13
CDH8-205ENST00000577730 MT1HL1P0DM35 61 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 KRTAP8-1Q8IUC2 63 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 DNAH11Q96DT5 4516 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 TACC2O95359 2948 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 FLNCQ14315 2725 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 ATMQ13315 3056 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 TENM1Q9UKZ4 2725 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
CDH8-205ENST00000577730 LAMA2P24043 3122 aaKnown RBP1.71□□□□□ -2.14
CDH8-205ENST00000577730 DCHS2Q6V1P9 2916 aa1.7□□□□□ -2.14
CDH8-205ENST00000577730 ALMS1Q8TCU4 4167 aa1.7□□□□□ -2.14
CDH8-205ENST00000577730 ADGRG4Q8IZF6 3080 aa1.7□□□□□ -2.14
CDH8-205ENST00000577730 VWFP04275 2813 aa1.7□□□□□ -2.14
CDH8-205ENST00000577730 DMXL2Q8TDJ6 3036 aa1.69□□□□□ -2.14
CDH8-205ENST00000577730 DNAH2Q9P225 4427 aa1.69□□□□□ -2.14
CDH8-205ENST00000577730 WDFY4Q6ZS81 3184 aa1.69□□□□□ -2.14
CDH8-205ENST00000577730 LCE3CQ5T5A8 94 aa1.68□□□□□ -2.14
CDH8-205ENST00000577730 ZANQ9Y493 2812 aa1.68□□□□□ -2.14
CDH8-205ENST00000577730 SRRM2Q9UQ35 2752 aaKnown RBP1.68□□□□□ -2.14
CDH8-205ENST00000577730 PDZD2O15018 2839 aa1.67□□□□□ -2.14
CDH8-205ENST00000577730 FCGBPQ9Y6R7 5405 aaPredicted RBP1.67□□□□□ -2.14
CDH8-205ENST00000577730 MEGF8Q7Z7M0 2845 aa1.67□□□□□ -2.14
CDH8-205ENST00000577730 FRYLO94915 3013 aa1.66□□□□□ -2.14
CDH8-205ENST00000577730 TENM4Q6N022 2769 aa1.65□□□□□ -2.15
CDH8-205ENST00000577730 UNC80Q8N2C7 3258 aa1.65□□□□□ -2.15
CDH8-205ENST00000577730 COL12A1Q99715 3063 aa1.64□□□□□ -2.15
CDH8-205ENST00000577730 RANBP2P49792 3224 aaKnown RBP1.64□□□□□ -2.15
CDH8-205ENST00000577730 FBN2P35556 2912 aa1.64□□□□□ -2.15
CDH8-205ENST00000577730 PKD1L1Q8TDX9 2849 aa1.63□□□□□ -2.15
CDH8-205ENST00000577730 MUC2Q02817 5179 aa1.63□□□□□ -2.15
CDH8-205ENST00000577730 SPRR2GQ9BYE4 73 aa1.63□□□□□ -2.15
CDH8-205ENST00000577730 VPS13AQ96RL7 3174 aa1.63□□□□□ -2.15
CDH8-205ENST00000577730 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
CDH8-205ENST00000577730 BRCA2P51587 3418 aa1.62□□□□□ -2.15
CDH8-205ENST00000577730 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
CDH8-205ENST00000577730 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.62□□□□□ -2.15
CDH8-205ENST00000577730 FAT3Q8TDW7 4589 aa1.61□□□□□ -2.15
CDH8-205ENST00000577730 CRYBG3Q68DQ2 2970 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms