RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 LINC00313P59037 77 aa6.5□□□□□ -1.37
SSH2-205ENST00000577483 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
SSH2-205ENST00000577483 NAA38Q9BRA0 125 aaKnown RBP6.48□□□□□ -1.37
SSH2-205ENST00000577483 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
SSH2-205ENST00000577483 VPS25Q9BRG1 176 aa6.47□□□□□ -1.37
SSH2-205ENST00000577483 A0A1B0GV90 55 aa6.47□□□□□ -1.37
SSH2-205ENST00000577483 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
SSH2-205ENST00000577483 IGHV6-1A0A0B4J1U7 121 aa6.45□□□□□ -1.38
SSH2-205ENST00000577483 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
SSH2-205ENST00000577483 A0A1W2PPM0 123 aa6.44□□□□□ -1.38
SSH2-205ENST00000577483 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
SSH2-205ENST00000577483 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
SSH2-205ENST00000577483 TRBV20-1A0A075B6N2 111 aa6.41□□□□□ -1.38
SSH2-205ENST00000577483 C9JAW5 83 aa6.41□□□□□ -1.38
SSH2-205ENST00000577483 ATXN8Q156A1 80 aa6.39□□□□□ -1.39
SSH2-205ENST00000577483 LYRM7Q5U5X0 104 aa6.39□□□□□ -1.39
SSH2-205ENST00000577483 C8orf87E5RJ46 101 aa6.39□□□□□ -1.39
SSH2-205ENST00000577483 Q6ZQT0 140 aa6.39□□□□□ -1.39
SSH2-205ENST00000577483 SPCS1Q9Y6A9 102 aa6.39□□□□□ -1.39
SSH2-205ENST00000577483 K7EP34 96 aa6.38□□□□□ -1.39
SSH2-205ENST00000577483 HRES1P13985 223 aa6.38□□□□□ -1.39
SSH2-205ENST00000577483 MPLKIPQ8TAP9 179 aa6.37□□□□□ -1.39
SSH2-205ENST00000577483 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
SSH2-205ENST00000577483 J3KT08 172 aa6.36□□□□□ -1.39
SSH2-205ENST00000577483 LOC110117498A0A087WWA1 95 aa6.35□□□□□ -1.39
SSH2-205ENST00000577483 JMJD7-PLA2G4BH0Y9G9 81 aa6.35□□□□□ -1.39
SSH2-205ENST00000577483 GTF2H5Q6ZYL4 71 aa6.35□□□□□ -1.39
SSH2-205ENST00000577483 C14orf132Q9NPU4 83 aa6.34□□□□□ -1.39
SSH2-205ENST00000577483 FAM236DA0A1B0GTK5 79 aa6.33□□□□□ -1.4
SSH2-205ENST00000577483 FAM236CP0DP71 79 aa6.33□□□□□ -1.4
SSH2-205ENST00000577483 ZCCHC13Q8WW36 166 aaKnown RBP6.32□□□□□ -1.4
SSH2-205ENST00000577483 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
SSH2-205ENST00000577483 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
SSH2-205ENST00000577483 A0A1B0GW54 56 aa6.3□□□□□ -1.4
SSH2-205ENST00000577483 A8MWP4 228 aa6.3□□□□□ -1.4
SSH2-205ENST00000577483 IGKV3D-7A0A0C4DH55 119 aa6.29□□□□□ -1.4
SSH2-205ENST00000577483 NDUFB1O75438 58 aa6.29□□□□□ -1.4
SSH2-205ENST00000577483 C8orf17Q9NRJ1 99 aa6.29□□□□□ -1.4
SSH2-205ENST00000577483 PDE6GP18545 87 aa6.28□□□□□ -1.4
SSH2-205ENST00000577483 MTURNQ8N3F0 131 aa6.28□□□□□ -1.4
SSH2-205ENST00000577483 PRO0461Q9UI25 63 aa6.28□□□□□ -1.4
SSH2-205ENST00000577483 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
SSH2-205ENST00000577483 MT2AP02795 61 aa6.27□□□□□ -1.41
SSH2-205ENST00000577483 SPINK7P58062 85 aa6.27□□□□□ -1.41
SSH2-205ENST00000577483 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
SSH2-205ENST00000577483 F8W1H4 67 aa6.25□□□□□ -1.41
SSH2-205ENST00000577483 MT1FP04733 61 aa6.24□□□□□ -1.41
SSH2-205ENST00000577483 Q6ZVQ6 151 aa6.24□□□□□ -1.41
SSH2-205ENST00000577483 PRR15Q8IV56 129 aa6.24□□□□□ -1.41
SSH2-205ENST00000577483 H3BT86 120 aa6.23□□□□□ -1.41
SSH2-205ENST00000577483 NREPQ16612 68 aa6.23□□□□□ -1.41
SSH2-205ENST00000577483 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
SSH2-205ENST00000577483 USH2AO75445 5202 aa6.21□□□□□ -1.41
SSH2-205ENST00000577483 K7EQZ3 153 aa6.2□□□□□ -1.42
SSH2-205ENST00000577483 WFDC13Q8IUB5 93 aa6.19□□□□□ -1.42
SSH2-205ENST00000577483 ETDBQ3ZM63 59 aa6.18□□□□□ -1.42
SSH2-205ENST00000577483 TMEM254Q8TBM7 123 aa6.18□□□□□ -1.42
SSH2-205ENST00000577483 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
SSH2-205ENST00000577483 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
SSH2-205ENST00000577483 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
SSH2-205ENST00000577483 hDV103S1A0JD37 113 aa6.15□□□□□ -1.42
SSH2-205ENST00000577483 KRTAP10-10P60014 251 aa6.15□□□□□ -1.42
SSH2-205ENST00000577483 BPY2O14599 106 aa6.12□□□□□ -1.43
SSH2-205ENST00000577483 NDUFS5O43920 106 aa6.11□□□□□ -1.43
SSH2-205ENST00000577483 Q8N9L7 120 aa6.11□□□□□ -1.43
SSH2-205ENST00000577483 Q5W150 140 aa6.09□□□□□ -1.43
SSH2-205ENST00000577483 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
SSH2-205ENST00000577483 IGKV2D-30A0A075B6S6 120 aa6.05□□□□□ -1.44
SSH2-205ENST00000577483 K7ERU9 68 aa6.05□□□□□ -1.44
SSH2-205ENST00000577483 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
SSH2-205ENST00000577483 CASC2Q6XLA1 102 aa6.05□□□□□ -1.44
SSH2-205ENST00000577483 KRTAP19-1Q8IUB9 90 aa6.05□□□□□ -1.44
SSH2-205ENST00000577483 J3QR89 54 aa6.04□□□□□ -1.44
SSH2-205ENST00000577483 LINC00846Q9NV44 126 aa6.04□□□□□ -1.44
SSH2-205ENST00000577483 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
SSH2-205ENST00000577483 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
SSH2-205ENST00000577483 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
SSH2-205ENST00000577483 FCGBPQ9Y6R7 5405 aaPredicted RBP6.01□□□□□ -1.45
SSH2-205ENST00000577483 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
SSH2-205ENST00000577483 UBL5Q9BZL1 73 aa5.99□□□□□ -1.45
SSH2-205ENST00000577483 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
SSH2-205ENST00000577483 ACYP1P07311 99 aa5.97□□□□□ -1.45
SSH2-205ENST00000577483 CXCL6P80162 114 aa5.97□□□□□ -1.45
SSH2-205ENST00000577483 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
SSH2-205ENST00000577483 C4orf26Q17RF5 130 aa5.96□□□□□ -1.45
SSH2-205ENST00000577483 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
SSH2-205ENST00000577483 MACF1Q9UPN3 7388 aaKnown RBP5.91□□□□□ -1.46
SSH2-205ENST00000577483 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
SSH2-205ENST00000577483 LINC00643Q86TS7 51 aa5.86□□□□□ -1.47
SSH2-205ENST00000577483 C5orf47Q569G3 176 aa5.85□□□□□ -1.47
SSH2-205ENST00000577483 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
SSH2-205ENST00000577483 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
SSH2-205ENST00000577483 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.48
SSH2-205ENST00000577483 ATP5EP2Q5VTU8 51 aa5.83□□□□□ -1.48
SSH2-205ENST00000577483 C1orf64Q8NEQ6 169 aa5.83□□□□□ -1.48
SSH2-205ENST00000577483 S4R3F8 94 aa5.82□□□□□ -1.48
SSH2-205ENST00000577483 LCA10Q71F78 164 aa5.81□□□□□ -1.48
SSH2-205ENST00000577483 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
SSH2-205ENST00000577483 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
SSH2-205ENST00000577483 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms