RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 PCP4P48539 62 aa10.83□□□□□ -0.68
ABR-231ENST00000574875 LIMD2Q9BT23 127 aa10.83□□□□□ -0.68
ABR-231ENST00000574875 A0A087WSZ3 146 aa10.82□□□□□ -0.68
ABR-231ENST00000574875 HIST1H4AP62805 103 aaKnown RBP10.82□□□□□ -0.68
ABR-231ENST00000574875 CD164Q04900 197 aa10.81□□□□□ -0.68
ABR-231ENST00000574875 ASB16-AS1Q495Z4 193 aa10.8□□□□□ -0.68
ABR-231ENST00000574875 FAT4Q6V0I7 4981 aa10.79□□□□□ -0.68
ABR-231ENST00000574875 FAM236AA0A1B0GUQ0 79 aa10.78□□□□□ -0.68
ABR-231ENST00000574875 FAM236BA0A1B0GV22 79 aa10.78□□□□□ -0.68
ABR-231ENST00000574875 KRTAP9-2Q9BYQ4 174 aa10.78□□□□□ -0.68
ABR-231ENST00000574875 SS18L2Q9UHA2 77 aa10.78□□□□□ -0.68
ABR-231ENST00000574875 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.69
ABR-231ENST00000574875 A0A087WVE0 104 aa10.73□□□□□ -0.69
ABR-231ENST00000574875 XP32Q5T750 250 aa10.73□□□□□ -0.69
ABR-231ENST00000574875 J3KT08 172 aa10.72□□□□□ -0.69
ABR-231ENST00000574875 ATOX1O00244 68 aa10.72□□□□□ -0.69
ABR-231ENST00000574875 ANAPC13Q9BS18 74 aa10.72□□□□□ -0.69
ABR-231ENST00000574875 IGKV4-1P06312 121 aa10.7□□□□□ -0.7
ABR-231ENST00000574875 Q5XG85 94 aa10.7□□□□□ -0.7
ABR-231ENST00000574875 LINC00472Q9H8W2 130 aa10.7□□□□□ -0.7
ABR-231ENST00000574875 LCE2AQ5TA79 106 aaPredicted RBP10.69□□□□□ -0.7
ABR-231ENST00000574875 DSCR10P59022 87 aa10.68□□□□□ -0.7
ABR-231ENST00000574875 KRTAP4-1Q9BYQ7 146 aa10.66□□□□□ -0.7
ABR-231ENST00000574875 C9orf92A6NGG3 77 aa10.65□□□□□ -0.7
ABR-231ENST00000574875 C1orf195Q5TG92 126 aa10.65□□□□□ -0.7
ABR-231ENST00000574875 Q8N9L7 120 aa10.63□□□□□ -0.71
ABR-231ENST00000574875 SMIM20Q8N5G0 67 aa10.62□□□□□ -0.71
ABR-231ENST00000574875 A8MWP4 228 aa10.61□□□□□ -0.71
ABR-231ENST00000574875 K7EQZ3 153 aa10.6□□□□□ -0.71
ABR-231ENST00000574875 DEFB116Q30KQ4 102 aa10.6□□□□□ -0.71
ABR-231ENST00000574875 Q96NJ1 140 aa10.6□□□□□ -0.71
ABR-231ENST00000574875 KRTAP9-6A0A140TA67 174 aa10.59□□□□□ -0.71
ABR-231ENST00000574875 NDUFB1O75438 58 aa10.59□□□□□ -0.71
ABR-231ENST00000574875 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
ABR-231ENST00000574875 PCOTHQ58A44 107 aa10.55□□□□□ -0.72
ABR-231ENST00000574875 SERP2Q8N6R1 65 aa10.55□□□□□ -0.72
ABR-231ENST00000574875 HCG22E2RYF7 251 aa10.54□□□□□ -0.72
ABR-231ENST00000574875 TRAV7A0A075B6U4 112 aa10.52□□□□□ -0.73
ABR-231ENST00000574875 COX7CP15954 63 aa10.52□□□□□ -0.73
ABR-231ENST00000574875 UQCRQO14949 82 aa10.51□□□□□ -0.73
ABR-231ENST00000574875 A0A1B0GVX0 72 aa10.47□□□□□ -0.73
ABR-231ENST00000574875 CASC2Q6XLA1 102 aa10.45□□□□□ -0.74
ABR-231ENST00000574875 CCDC179H3BU77 68 aa10.43□□□□□ -0.74
ABR-231ENST00000574875 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
ABR-231ENST00000574875 OCR1Q9BZK8 76 aa10.43□□□□□ -0.74
ABR-231ENST00000574875 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
ABR-231ENST00000574875 WFDC13Q8IUB5 93 aa10.42□□□□□ -0.74
ABR-231ENST00000574875 C8orf17Q9NRJ1 99 aa10.41□□□□□ -0.74
ABR-231ENST00000574875 IGHV6-1A0A0B4J1U7 121 aa10.4□□□□□ -0.74
ABR-231ENST00000574875 C8orf87E5RJ46 101 aa10.4□□□□□ -0.74
ABR-231ENST00000574875 hDV103S1A0JD37 113 aa10.39□□□□□ -0.75
ABR-231ENST00000574875 LCE2CQ5TA81 110 aa10.38□□□□□ -0.75
ABR-231ENST00000574875 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
ABR-231ENST00000574875 TMEM254Q8TBM7 123 aa10.35□□□□□ -0.75
ABR-231ENST00000574875 C5orf47Q569G3 176 aa10.3□□□□□ -0.76
ABR-231ENST00000574875 MRPL34Q9BQ48 92 aaKnown RBP10.3□□□□□ -0.76
ABR-231ENST00000574875 TP53AIP1Q9HCN2 124 aa10.3□□□□□ -0.76
ABR-231ENST00000574875 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
ABR-231ENST00000574875 LINC00313P59037 77 aa10.28□□□□□ -0.76
ABR-231ENST00000574875 KLKP1Q107X0 134 aa10.27□□□□□ -0.77
ABR-231ENST00000574875 Q75L30 129 aa10.27□□□□□ -0.77
ABR-231ENST00000574875 ATP11AUNQ6ZP68 121 aa10.26□□□□□ -0.77
ABR-231ENST00000574875 MT1HP80294 61 aa10.25□□□□□ -0.77
ABR-231ENST00000574875 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
ABR-231ENST00000574875 FSIP2Q5CZC0 6907 aa10.23□□□□□ -0.77
ABR-231ENST00000574875 H3BPC8 53 aa10.22□□□□□ -0.77
ABR-231ENST00000574875 NDUFC1O43677 76 aa10.22□□□□□ -0.77
ABR-231ENST00000574875 MP68P56378 58 aa10.22□□□□□ -0.77
ABR-231ENST00000574875 NDUFS5O43920 106 aa10.19□□□□□ -0.78
ABR-231ENST00000574875 COX6B2Q6YFQ2 88 aa10.19□□□□□ -0.78
ABR-231ENST00000574875 TRAV22A0A0B4J277 110 aa10.17□□□□□ -0.78
ABR-231ENST00000574875 C20orf166-AS1Q96NR2 134 aa10.17□□□□□ -0.78
ABR-231ENST00000574875 SNURFQ9Y675 71 aa10.17□□□□□ -0.78
ABR-231ENST00000574875 H0Y9P7 68 aa10.16□□□□□ -0.78
ABR-231ENST00000574875 Q8N9P0 234 aaPredicted RBP10.16□□□□□ -0.78
ABR-231ENST00000574875 A8MUU9 505 aa10.15□□□□□ -0.78
ABR-231ENST00000574875 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
ABR-231ENST00000574875 TMEM258P61165 79 aa10.14□□□□□ -0.79
ABR-231ENST00000574875 LCE2DQ5TA82 110 aaPredicted RBP10.14□□□□□ -0.79
ABR-231ENST00000574875 CYSTM1Q9H1C7 97 aa10.14□□□□□ -0.79
ABR-231ENST00000574875 ZCCHC13Q8WW36 166 aaKnown RBP10.13□□□□□ -0.79
ABR-231ENST00000574875 H7BZZ5 65 aa10.1□□□□□ -0.79
ABR-231ENST00000574875 M0R2T5 61 aa10.1□□□□□ -0.79
ABR-231ENST00000574875 CRCT1Q9UGL9 99 aa10.1□□□□□ -0.79
ABR-231ENST00000574875 LINC00208Q96KT6 92 aa10.09□□□□□ -0.79
ABR-231ENST00000574875 KRTAP10-6P60371 365 aaPredicted RBP10.06□□□□□ -0.8
ABR-231ENST00000574875 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
ABR-231ENST00000574875 LORP23490 312 aaPredicted RBP10.05□□□□□ -0.8
ABR-231ENST00000574875 ATP5EP56381 51 aaPredicted RBP10.03□□□□□ -0.8
ABR-231ENST00000574875 FAM236DA0A1B0GTK5 79 aa10□□□□□ -0.81
ABR-231ENST00000574875 LOC101927531A0A1B0GV80 90 aa10□□□□□ -0.81
ABR-231ENST00000574875 FAM236CP0DP71 79 aa10□□□□□ -0.81
ABR-231ENST00000574875 FLGP20930 4061 aaPredicted RBP10□□□□□ -0.81
ABR-231ENST00000574875 Q5W150 140 aa9.98□□□□□ -0.81
ABR-231ENST00000574875 SPANXA2-OT1Q8N9U9 137 aa9.92□□□□□ -0.82
ABR-231ENST00000574875 CYP4F30PQ9H0H9 118 aa9.88□□□□□ -0.83
ABR-231ENST00000574875 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
ABR-231ENST00000574875 RPS28P62857 69 aaKnown RBP9.86□□□□□ -0.83
ABR-231ENST00000574875 SERP1Q9Y6X1 66 aa9.83□□□□□ -0.84
ABR-231ENST00000574875 HRES1P13985 223 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms