RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 A0A1W2PNM2 257 aa5.24□□□□□ -1.57
RPA1-206ENST00000573994 ANKRD29Q8N6D5 301 aa5.24□□□□□ -1.57
RPA1-206ENST00000573994 SIGMAR1Q99720 223 aa5.24□□□□□ -1.57
RPA1-206ENST00000573994 TRACP01848 142 aa5.22□□□□□ -1.57
RPA1-206ENST00000573994 DSCR10P59022 87 aa5.22□□□□□ -1.57
RPA1-206ENST00000573994 UBE2V1Q13404 147 aa5.22□□□□□ -1.57
RPA1-206ENST00000573994 C20orf166-AS1Q96NR2 134 aa5.21□□□□□ -1.58
RPA1-206ENST00000573994 M0R2T5 61 aa5.2□□□□□ -1.58
RPA1-206ENST00000573994 SCGB1C2P0DMR2 95 aa5.2□□□□□ -1.58
RPA1-206ENST00000573994 A8MUU9 505 aa5.19□□□□□ -1.58
RPA1-206ENST00000573994 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
RPA1-206ENST00000573994 CCKP06307 115 aa5.17□□□□□ -1.58
RPA1-206ENST00000573994 IGKV4-1P06312 121 aa5.17□□□□□ -1.58
RPA1-206ENST00000573994 DEFB116Q30KQ4 102 aa5.17□□□□□ -1.58
RPA1-206ENST00000573994 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
RPA1-206ENST00000573994 LINC00313P59037 77 aa5.16□□□□□ -1.58
RPA1-206ENST00000573994 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
RPA1-206ENST00000573994 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
RPA1-206ENST00000573994 VPS25Q9BRG1 176 aa5.16□□□□□ -1.58
RPA1-206ENST00000573994 M0R143 59 aa5.15□□□□□ -1.59
RPA1-206ENST00000573994 LINC00472Q9H8W2 130 aa5.15□□□□□ -1.59
RPA1-206ENST00000573994 NOTCH2NLQ7Z3S9 236 aa5.14□□□□□ -1.59
RPA1-206ENST00000573994 NAA38Q9BRA0 125 aaKnown RBP5.14□□□□□ -1.59
RPA1-206ENST00000573994 TRBV20-1A0A075B6N2 111 aa5.13□□□□□ -1.59
RPA1-206ENST00000573994 A0A1B0GW54 56 aa5.13□□□□□ -1.59
RPA1-206ENST00000573994 KRTAP16-1A8MUX0 517 aa5.13□□□□□ -1.59
RPA1-206ENST00000573994 BAALC-AS2P0C853 105 aa5.13□□□□□ -1.59
RPA1-206ENST00000573994 IGHV6-1A0A0B4J1U7 121 aa5.12□□□□□ -1.59
RPA1-206ENST00000573994 C9JAW5 83 aa5.12□□□□□ -1.59
RPA1-206ENST00000573994 J3KT08 172 aa5.12□□□□□ -1.59
RPA1-206ENST00000573994 JMJD7-PLA2G4BH0Y9G9 81 aa5.11□□□□□ -1.59
RPA1-206ENST00000573994 ATXN8Q156A1 80 aa5.11□□□□□ -1.59
RPA1-206ENST00000573994 C8orf87E5RJ46 101 aa5.1□□□□□ -1.59
RPA1-206ENST00000573994 SMIM6P0DI80 62 aa5.1□□□□□ -1.59
RPA1-206ENST00000573994 PDE6GP18545 87 aa5.1□□□□□ -1.59
RPA1-206ENST00000573994 LYRM7Q5U5X0 104 aa5.1□□□□□ -1.59
RPA1-206ENST00000573994 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
RPA1-206ENST00000573994 Q6ZQT0 140 aa5.08□□□□□ -1.6
RPA1-206ENST00000573994 A0A1B0GVX0 72 aa5.07□□□□□ -1.6
RPA1-206ENST00000573994 NDUFB1O75438 58 aa5.07□□□□□ -1.6
RPA1-206ENST00000573994 LOC110117498A0A087WWA1 95 aa5.06□□□□□ -1.6
RPA1-206ENST00000573994 TSTD3H0UI37 97 aa5.06□□□□□ -1.6
RPA1-206ENST00000573994 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
RPA1-206ENST00000573994 BATFQ16520 125 aa5.05□□□□□ -1.6
RPA1-206ENST00000573994 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
RPA1-206ENST00000573994 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
RPA1-206ENST00000573994 HRES1P13985 223 aa5.03□□□□□ -1.6
RPA1-206ENST00000573994 C14orf132Q9NPU4 83 aa5.03□□□□□ -1.6
RPA1-206ENST00000573994 RBM12B-AS1Q9P1G2 102 aa5.03□□□□□ -1.6
RPA1-206ENST00000573994 A8MWP4 228 aa5.01□□□□□ -1.61
RPA1-206ENST00000573994 IGKV2-30P06310 120 aa5□□□□□ -1.61
RPA1-206ENST00000573994 MTURNQ8N3F0 131 aa5□□□□□ -1.61
RPA1-206ENST00000573994 MPLKIPQ8TAP9 179 aa5□□□□□ -1.61
RPA1-206ENST00000573994 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
RPA1-206ENST00000573994 USH2AO75445 5202 aa4.98□□□□□ -1.61
RPA1-206ENST00000573994 IGKV3D-7A0A0C4DH55 119 aa4.98□□□□□ -1.61
RPA1-206ENST00000573994 NREPQ16612 68 aa4.98□□□□□ -1.61
RPA1-206ENST00000573994 C8orf17Q9NRJ1 99 aa4.98□□□□□ -1.61
RPA1-206ENST00000573994 H3BT86 120 aa4.97□□□□□ -1.61
RPA1-206ENST00000573994 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
RPA1-206ENST00000573994 SPINK7P58062 85 aa4.95□□□□□ -1.62
RPA1-206ENST00000573994 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
RPA1-206ENST00000573994 A0A1W2PPM0 123 aa4.94□□□□□ -1.62
RPA1-206ENST00000573994 TAX1BP3O14907 124 aa4.94□□□□□ -1.62
RPA1-206ENST00000573994 MT2AP02795 61 aa4.94□□□□□ -1.62
RPA1-206ENST00000573994 Q6ZVQ6 151 aa4.94□□□□□ -1.62
RPA1-206ENST00000573994 LOC105371267A0A1B0GV96 52 aa4.93□□□□□ -1.62
RPA1-206ENST00000573994 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
RPA1-206ENST00000573994 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
RPA1-206ENST00000573994 K7EQZ3 153 aa4.91□□□□□ -1.62
RPA1-206ENST00000573994 MT1FP04733 61 aa4.91□□□□□ -1.62
RPA1-206ENST00000573994 WFDC13Q8IUB5 93 aa4.91□□□□□ -1.62
RPA1-206ENST00000573994 TMEM254Q8TBM7 123 aa4.91□□□□□ -1.62
RPA1-206ENST00000573994 MRPL34Q9BQ48 92 aaKnown RBP4.9□□□□□ -1.63
RPA1-206ENST00000573994 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
RPA1-206ENST00000573994 BPY2O14599 106 aa4.88□□□□□ -1.63
RPA1-206ENST00000573994 NDUFS5O43920 106 aa4.87□□□□□ -1.63
RPA1-206ENST00000573994 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
RPA1-206ENST00000573994 SPCS1Q9Y6A9 102 aa4.87□□□□□ -1.63
RPA1-206ENST00000573994 Q8N9L7 120 aa4.86□□□□□ -1.63
RPA1-206ENST00000573994 COL5A1-AS1Q5SY13 56 aa4.85□□□□□ -1.63
RPA1-206ENST00000573994 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
RPA1-206ENST00000573994 CASC2Q6XLA1 102 aa4.81□□□□□ -1.64
RPA1-206ENST00000573994 UBL5Q9BZL1 73 aa4.81□□□□□ -1.64
RPA1-206ENST00000573994 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
RPA1-206ENST00000573994 Q5W150 140 aa4.8□□□□□ -1.64
RPA1-206ENST00000573994 HCG22E2RYF7 251 aa4.79□□□□□ -1.64
RPA1-206ENST00000573994 K7EP34 96 aa4.79□□□□□ -1.64
RPA1-206ENST00000573994 CXCL6P80162 114 aa4.79□□□□□ -1.64
RPA1-206ENST00000573994 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
RPA1-206ENST00000573994 C7orf65Q6ZTY9 151 aa4.79□□□□□ -1.64
RPA1-206ENST00000573994 PRO0461Q9UI25 63 aa4.79□□□□□ -1.64
RPA1-206ENST00000573994 GTF2H5Q6ZYL4 71 aa4.77□□□□□ -1.65
RPA1-206ENST00000573994 LINC00846Q9NV44 126 aa4.77□□□□□ -1.65
RPA1-206ENST00000573994 F8W1H4 67 aa4.75□□□□□ -1.65
RPA1-206ENST00000573994 C4orf26Q17RF5 130 aa4.72□□□□□ -1.65
RPA1-206ENST00000573994 TP53AIP1Q9HCN2 124 aa4.72□□□□□ -1.65
RPA1-206ENST00000573994 PCP4L1A6NKN8 68 aa4.7□□□□□ -1.66
RPA1-206ENST00000573994 ETDBQ3ZM63 59 aa4.67□□□□□ -1.66
RPA1-206ENST00000573994 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms