RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 LINC00575Q6W349 94 aa4.96□□□□□ -1.62
CTDNEP1-202ENST00000570380 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
CTDNEP1-202ENST00000570380 TAX1BP3O14907 124 aa4.95□□□□□ -1.62
CTDNEP1-202ENST00000570380 KRTAP4-8Q9BYQ9 185 aa4.95□□□□□ -1.62
CTDNEP1-202ENST00000570380 PRO1854Q9UHT4 67 aa4.95□□□□□ -1.62
CTDNEP1-202ENST00000570380 SPCS1Q9Y6A9 102 aa4.95□□□□□ -1.62
CTDNEP1-202ENST00000570380 A0A1W2PPM0 123 aa4.94□□□□□ -1.62
CTDNEP1-202ENST00000570380 OCIAD2Q56VL3 154 aa4.94□□□□□ -1.62
CTDNEP1-202ENST00000570380 MDN1Q9NU22 5596 aa4.94□□□□□ -1.62
CTDNEP1-202ENST00000570380 K7ERJ3 54 aa4.93□□□□□ -1.62
CTDNEP1-202ENST00000570380 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
CTDNEP1-202ENST00000570380 KMT2DO14686 5537 aa4.93□□□□□ -1.62
CTDNEP1-202ENST00000570380 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 K7EP34 96 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 SNCGO76070 127 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 UBE2V1Q13404 147 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 Q6ZQY7 126 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 MTURNQ8N3F0 131 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 FAM218AQ96MZ4 157 aa4.92□□□□□ -1.62
CTDNEP1-202ENST00000570380 A6NN06 94 aa4.9□□□□□ -1.63
CTDNEP1-202ENST00000570380 TRIAP1O43715 76 aa4.89□□□□□ -1.63
CTDNEP1-202ENST00000570380 ATXN8Q156A1 80 aa4.89□□□□□ -1.63
CTDNEP1-202ENST00000570380 SS18L2Q9UHA2 77 aa4.89□□□□□ -1.63
CTDNEP1-202ENST00000570380 J3QR89 54 aa4.88□□□□□ -1.63
CTDNEP1-202ENST00000570380 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
CTDNEP1-202ENST00000570380 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
CTDNEP1-202ENST00000570380 DNAL4O96015 105 aa4.87□□□□□ -1.63
CTDNEP1-202ENST00000570380 SMCPP49901 116 aaPredicted RBP4.87□□□□□ -1.63
CTDNEP1-202ENST00000570380 LINC00313P59037 77 aa4.87□□□□□ -1.63
CTDNEP1-202ENST00000570380 F8W1H4 67 aa4.86□□□□□ -1.63
CTDNEP1-202ENST00000570380 H0YGX0 51 aa4.86□□□□□ -1.63
CTDNEP1-202ENST00000570380 K7ERU9 68 aa4.85□□□□□ -1.63
CTDNEP1-202ENST00000570380 A0A087WSZ3 146 aa4.83□□□□□ -1.64
CTDNEP1-202ENST00000570380 H3BMG7 143 aa4.83□□□□□ -1.64
CTDNEP1-202ENST00000570380 TEN1Q86WV5 123 aa4.82□□□□□ -1.64
CTDNEP1-202ENST00000570380 PPDPFLQ8WWR9 84 aa4.82□□□□□ -1.64
CTDNEP1-202ENST00000570380 SIGMAR1Q99720 223 aa4.82□□□□□ -1.64
CTDNEP1-202ENST00000570380 A0A1B0GX51 115 aa4.81□□□□□ -1.64
CTDNEP1-202ENST00000570380 C9JAW5 83 aa4.81□□□□□ -1.64
CTDNEP1-202ENST00000570380 H3BT86 120 aa4.81□□□□□ -1.64
CTDNEP1-202ENST00000570380 SPINK7P58062 85 aa4.81□□□□□ -1.64
CTDNEP1-202ENST00000570380 TRACP01848 142 aa4.8□□□□□ -1.64
CTDNEP1-202ENST00000570380 MT1BP07438 61 aa4.8□□□□□ -1.64
CTDNEP1-202ENST00000570380 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
CTDNEP1-202ENST00000570380 A0A1B0GV72 72 aa4.79□□□□□ -1.64
CTDNEP1-202ENST00000570380 H3BQ85 93 aa4.79□□□□□ -1.64
CTDNEP1-202ENST00000570380 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
CTDNEP1-202ENST00000570380 ANKRD29Q8N6D5 301 aa4.78□□□□□ -1.64
CTDNEP1-202ENST00000570380 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
CTDNEP1-202ENST00000570380 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
CTDNEP1-202ENST00000570380 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
CTDNEP1-202ENST00000570380 ORMDL1Q9P0S3 153 aa4.77□□□□□ -1.65
CTDNEP1-202ENST00000570380 A0A1W2PNM2 257 aa4.76□□□□□ -1.65
CTDNEP1-202ENST00000570380 PCP4P48539 62 aa4.76□□□□□ -1.65
CTDNEP1-202ENST00000570380 WFDC13Q8IUB5 93 aa4.76□□□□□ -1.65
CTDNEP1-202ENST00000570380 ETDBQ3ZM63 59 aa4.75□□□□□ -1.65
CTDNEP1-202ENST00000570380 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
CTDNEP1-202ENST00000570380 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
CTDNEP1-202ENST00000570380 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
CTDNEP1-202ENST00000570380 SPRR2EP22531 72 aa4.73□□□□□ -1.65
CTDNEP1-202ENST00000570380 SPRR2BP35325 72 aa4.73□□□□□ -1.65
CTDNEP1-202ENST00000570380 SPRR2AP35326 72 aa4.73□□□□□ -1.65
CTDNEP1-202ENST00000570380 IGHV6-1A0A0B4J1U7 121 aa4.72□□□□□ -1.65
CTDNEP1-202ENST00000570380 H3BS24 57 aa4.72□□□□□ -1.65
CTDNEP1-202ENST00000570380 TMEM256-PLSCR3K7ERE1 68 aa4.72□□□□□ -1.65
CTDNEP1-202ENST00000570380 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
CTDNEP1-202ENST00000570380 Q5VV11 94 aa4.72□□□□□ -1.65
CTDNEP1-202ENST00000570380 PRO0461Q9UI25 63 aa4.72□□□□□ -1.65
CTDNEP1-202ENST00000570380 JMJD7-PLA2G4BH0Y9G9 81 aa4.71□□□□□ -1.66
CTDNEP1-202ENST00000570380 BAALC-AS2P0C853 105 aa4.7□□□□□ -1.66
CTDNEP1-202ENST00000570380 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
CTDNEP1-202ENST00000570380 TRBV7-4A0A0J9YYF1 115 aa4.69□□□□□ -1.66
CTDNEP1-202ENST00000570380 ACYP1P07311 99 aa4.69□□□□□ -1.66
CTDNEP1-202ENST00000570380 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
CTDNEP1-202ENST00000570380 LINC00472Q9H8W2 130 aa4.69□□□□□ -1.66
CTDNEP1-202ENST00000570380 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
CTDNEP1-202ENST00000570380 CCKP06307 115 aa4.68□□□□□ -1.66
CTDNEP1-202ENST00000570380 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
CTDNEP1-202ENST00000570380 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
CTDNEP1-202ENST00000570380 PDE6GP18545 87 aa4.66□□□□□ -1.66
CTDNEP1-202ENST00000570380 RBM3P98179 157 aaKnown RBP4.66□□□□□ -1.66
CTDNEP1-202ENST00000570380 DSCR8Q96T75 97 aa4.66□□□□□ -1.66
CTDNEP1-202ENST00000570380 C8orf87E5RJ46 101 aa4.65□□□□□ -1.67
CTDNEP1-202ENST00000570380 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
CTDNEP1-202ENST00000570380 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
CTDNEP1-202ENST00000570380 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
CTDNEP1-202ENST00000570380 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
CTDNEP1-202ENST00000570380 Q6ZQT0 140 aa4.63□□□□□ -1.67
CTDNEP1-202ENST00000570380 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
CTDNEP1-202ENST00000570380 LOC110117498A0A087WWA1 95 aa4.61□□□□□ -1.67
CTDNEP1-202ENST00000570380 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
CTDNEP1-202ENST00000570380 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
CTDNEP1-202ENST00000570380 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
CTDNEP1-202ENST00000570380 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
CTDNEP1-202ENST00000570380 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
CTDNEP1-202ENST00000570380 UBL5Q9BZL1 73 aa4.6□□□□□ -1.67
CTDNEP1-202ENST00000570380 ATP5EP2Q5VTU8 51 aa4.59□□□□□ -1.67
CTDNEP1-202ENST00000570380 SPRR2DP22532 72 aa4.58□□□□□ -1.68
CTDNEP1-202ENST00000570380 SCGB1A1P11684 91 aa4.57□□□□□ -1.68
CTDNEP1-202ENST00000570380 LINC00643Q86TS7 51 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms